CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY59516	Canola	nucleus	96.46	96.25
Bra002360.1-P	Field mustard	nucleus	98.89	96.13
CDY72062	Canola	plastid	28.21	85.86
CDX92405	Canola	nucleus	84.07	83.06
CDY09103	Canola	nucleus	79.2	79.03
CDY16587	Canola	nucleus	76.11	78.0
CDX92417	Canola	nucleus	54.65	76.71
CDY16595	Canola	nucleus	76.44	75.11
AT5G21150.1	Thale cress	nucleus	72.9	73.55
CDY04475	Canola	nucleus	63.94	62.62
CDY56413	Canola	nucleus	63.72	62.41
CDY48192	Canola	nucleus	63.05	61.82
CDX77061	Canola	nucleus	62.83	61.61
GSMUA_Achr9P05150_001	Banana	nucleus	61.5	60.77
Os01t0275600-01	Rice	nucleus	60.62	60.62
Zm00001d040429_P012	Maize	nucleus	59.96	60.16
Os04t0151800-02	Rice	nucleus	60.51	60.04
Zm00001d008249_P012	Maize	nucleus	59.73	60.0
CDY68123	Canola	cytosol, endoplasmic reticulum, nucleus	15.6	59.75
TraesCS3A01G188400.1	Wheat	nucleus	60.4	59.61
OQU86696	Sorghum	nucleus	59.18	59.44
HORVU3Hr1G038830.1	Barley	nucleus	60.29	59.11
TraesCS7D01G458800.1	Wheat	nucleus	30.31	58.8
PGSC0003DMT400039204	Potato	cytosol	9.73	58.67
EES18816	Sorghum	nucleus	58.19	57.87
TraesCS3B01G217300.2	Wheat	golgi, nucleus, unclear	60.29	57.73
TraesCS1A01G445500.1	Wheat	golgi, unclear	59.07	57.73
TraesCS1D01G453600.1	Wheat	nucleus	58.85	57.7
TraesCS1B01G480100.1	Wheat	nucleus	59.07	57.61
TraesCS7A01G533100.1	Wheat	cytosol	57.41	57.6
Zm00001d039214_P025	Maize	nucleus	58.08	56.82
TraesCS7D01G520400.1	Wheat	nucleus	55.97	55.67
TraesCS7B01G450300.1	Wheat	nucleus	55.53	54.62
TraesCS3D01G191600.5	Wheat	nucleus	60.29	54.39
CDX84712	Canola	nucleus	51.33	53.52
TraesCS7B01G450200.2	Wheat	nucleus	54.76	53.46
CDX79495	Canola	nucleus	51.22	53.4
TraesCS7A01G521000.1	Wheat	nucleus	47.79	53.27
TraesCS7B01G437900.1	Wheat	cytosol	47.12	52.79
TraesCS7B01G437700.1	Wheat	nucleus	50.11	51.54
EES00570	Sorghum	nucleus	50.66	51.0
Os01t0275200-00	Rice	golgi, peroxisome, plastid	25.33	49.04
TraesCS7B01G373400.1	Wheat	nucleus	41.48	47.71
Solyc03g111760.2.1	Tomato	mitochondrion	44.69	44.1
TraesCS7D01G458900.1	Wheat	mitochondrion	8.41	41.76
HORVU7Hr1G107770.1	Barley	nucleus	27.32	41.3
CDY62055	Canola	nucleus	24.34	38.19
CDX71410	Canola	nucleus	33.52	31.83
CDY04517	Canola	plastid	33.63	31.77
CDY04311	Canola	cytosol, nucleus, plastid	34.07	31.43
CDX94724	Canola	plastid	33.74	31.09
CDY22332	Canola	plastid	33.52	31.08
CDY41831	Canola	nucleus	34.96	30.27
CDY68174	Canola	nucleus	35.07	30.13
CDY23683	Canola	cytosol, nucleus, plastid	34.07	28.36
CDY70429	Canola	plastid	26.44	26.94
CDY51501	Canola	nucleus	26.77	26.92
CDY07349	Canola	nucleus	28.1	25.81
CDY28550	Canola	cytosol, plastid	27.65	25.61
CDY25885	Canola	cytosol	27.43	24.55
CDY02373	Canola	nucleus	27.21	24.05
CDY55876	Canola	cytosol	26.99	23.57

Protein Annotations

MapMan:12.5.1.13	Gene3D:2.170.260.10	Gene3D:3.30.420.10	Gene3D:3.40.50.2300	GO:A0A078DT10	InterPro:ArgoL1
InterPro:ArgoL2	InterPro:Argonaute_N	EnsemblPlants:CDX92406	ProteinID:CDX92406	ProteinID:CDX92406.1	ncoils:Coil
GO:GO:0003674	GO:GO:0003676	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00154168001	InterPro:IPR003100
InterPro:IPR003165	InterPro:IPR036397	InterPro:PAZ_dom	InterPro:PAZ_dom_sf	PFAM:PF02170	PFAM:PF02171
PFAM:PF08699	PFAM:PF16486	PFAM:PF16488	PFscan:PS50821	PFscan:PS50822	PANTHER:PTHR22891
PANTHER:PTHR22891:SF20	InterPro:Piwi	InterPro:RNaseH-like_sf	InterPro:RNaseH_sf	SMART:SM00950	SMART:SM01163
SUPFAM:SSF101690	SUPFAM:SSF53098	UniParc:UPI0004EEFD25	SEG:seg	:	:

Description

BnaA10g14450D

Coordinates

chrLK031872:-:479974..484600

Molecular Weight (calculated)

102050.0 Da

IEP (calculated)

9.610

GRAVY (calculated)

-0.378

Length

904 amino acids

Sequence
(BLAST)

001: MDSHEAKRLP PPPPVVPPNL VPEREPIKKT TLLPMARRGI GSEGVRTPLL TNHFRVNFNN ANGHFYHYSV TITYEDGSPM EAIGVFRKIL EKVQETYRTD
101: LGSKYFAYDG HKNLFTIGAL PSNKMDFLVV LENTPSSRNN TGNASPNDAD RKRSRLPHRS KKFMVEISYA ARIPMQAIAS AIRGKETDNI QDATRVLDVI
201: LRQNAARQGC LLVRQSFFHN DARNYINIGG GVFGARGFHT SFRTTQRGLS LNIDTSTTMV VQPGPVIDFL LANQNVNDPK YLDWNNARRA LKNLRVKVVP
301: SNRECKITGL SEERCKYQMF TMNSKNEKGD VQITVYNYFT EIRGLKLRYS GDFPCINVGK ANRPNYIPIE HCELVSLQRY TKSLSSFQKA SLVENSRQSP
401: PERMASLTNS MKKSNYNADL VLQESGVSIG SSFIQVEGRV LPAPRLRIGN GEEFQPRNGR WNFNKKKLVE PVTVTRWVVV NFSAGCDTDR IISDLIRCGQ
501: MKGMNVEPPY KVVFQEDPNY RGAPANIRVE KMFEQIQSEL RKEGKPKFIL CILAEKKNSL VYGPWKKKNL IEHGIVTQCI APPKNVKDQY ITNVLLKINA
601: KLGGLNSLLA MERSPRAMMP LVTQVPTFIV GMDVSHGSPN QADIPSIAAV VGSREWPLIS KYRACVRTQS RKVEMIDNLF KLVPNEKGKL VDEGIFWELL
701: FDFYTSSGKR RPEHIIIFRD GVSDSQFNQV LNIELDQIMQ ACKFVEENWE PKFTVIIAQK NHHTKFFQAE GPGNVPPGTI VDSRICHPHN NDFYLCAHAG
801: LIGTTRPTHY HVLYDEIRFS TDDLQELVHS LSYVYQRSTT AISVVAPICY AHLAAAQMGT VMKFEDMSLS ERSSIHDGIT RSGEPPVPPM PMLNSDVASS
901: MFFC

Best Arabidopsis Sequence Match ( AT5G21150.1 )
(BLAST)

001: MDSDEPNGSG LPPPPPFVPA NLVPEVEPVK KNILLPMARP RGSGSKGQKI PLLTNHFGVK FNKPSGYFFH YSVAINYEDG RPVEAKGIGR KILDKVQETY
101: QSDLGAKYFA YDGEKTLFTV GALPSNKLDF SVVLEEIPSS RNHAGNDTND ADRKRSRRPN QTKKFMVEIS YAAKIPMQAI ASALQGKETE NLQDALRVLD
201: IILRQSAARQ GCLLVRQSFF HNDVKNFVPI GGGVSGCRGF HSSFRTTQGG LSLNIDTSTT MIVQPGPVVD FLLANQNKKD PYGMDWNKAR RVLKNLRVQI
301: TLSNREYKIS GLSEHSCKDQ LFTWRKPNDK GEFEEVEITV LNYYKERNIE VRYSGDFPCI NVGKPKRPTY FPIEFCNLVS LQRYTKSLTN FQRAALVEKS
401: RQKPPERMAS LTKGLKDSNY NADPVLQDSG VSIITNFTQV EGRILPTPML KVGKGENLSP IKGKWNFMRK TLAEPTTVTR WAVVNFSARC DTNTLIRDLI
501: KCGREKGINV EPPFKDVINE NPQFRNAPAT VRVENMFEQI KSKLPKPPLF LLCILAERKN SDVYGPWKKK NLVDLGIVTQ CIAPTRLNDQ YLTNVLLKIN
601: AKLGGLNSLL AMERSPAMPK VTQVPTIIVG MDVSHGSPGQ SDIPSIAAVV SSRQWPLISK YKACVRTQSR KMEMIDNLFK PVNGKDEGMF RELLLDFYYS
701: SENRKPEHII IFRDGVSESQ FNQVLNIELD QMMQACKFLD DTWHPKFTVI VAQKNHHTKF FQSRGPDNVP PGTIIDSQIC HPRNFDFYLC AHAGMIGTTR
801: PTHYHVLYDE IGFATDDLQE LVHSLSYVYQ RSTTAISVVA PVCYAHLAAA QMGTVMKYEE LSETSSSHGG ITTPGAVPVP PMPQLHNNVS TSMFFC

Arabidopsis Description

AGO9Protein argonaute 9 [Source:UniProtKB/Swiss-Prot;Acc:Q84VQ0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.