Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU1Hr1G075270.8 | |
| HORVU6Hr1G022890.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G27040.1 | HORVU6Hr1G022890.1 | AT2G40030.1 | 19410546 |
| AT2G27040.1 | HORVU1Hr1G075270.8 | AT5G04290.1 | 19410546 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G458900.1 | Wheat | mitochondrion | 20.4 | 67.03 |
| TraesCS7B01G373400.1 | Wheat | nucleus | 73.08 | 55.6 |
| TraesCS7B01G437900.1 | Wheat | cytosol | 59.7 | 44.24 |
| TraesCS7A01G521000.1 | Wheat | nucleus | 58.36 | 43.03 |
| TraesCS7B01G437700.1 | Wheat | nucleus | 61.87 | 42.09 |
| Os01t0275200-00 | Rice | golgi, peroxisome, plastid | 28.09 | 35.97 |
| TraesCS7D01G458800.1 | Wheat | nucleus | 25.25 | 32.4 |
| GSMUA_Achr9P05150_001 | Banana | nucleus | 48.33 | 31.58 |
| HORVU3Hr1G038830.1 | Barley | nucleus | 48.66 | 31.56 |
| PGSC0003DMT400069459 | Potato | nucleus | 48.16 | 31.54 |
| VIT_06s0009g01200.t01 | Wine grape | nucleus | 47.99 | 31.43 |
| Solyc01g008960.2.1 | Tomato | nucleus | 47.66 | 31.35 |
| PGSC0003DMT400058471 | Potato | nucleus | 47.66 | 31.35 |
| Solyc06g073540.2.1 | Tomato | nucleus | 47.83 | 31.33 |
| EES00570 | Sorghum | nucleus | 46.49 | 30.96 |
| KRH73469 | Soybean | nucleus | 46.49 | 30.68 |
| KRH14678 | Soybean | nucleus | 46.32 | 30.57 |
| Solyc01g096750.1.1 | Tomato | nucleus | 44.48 | 30.19 |
| Bra034318.1-P | Field mustard | nucleus | 46.15 | 29.93 |
| CDY48192 | Canola | nucleus | 45.99 | 29.83 |
| Solyc06g073530.1.1 | Tomato | nucleus | 44.98 | 29.76 |
| CDX77061 | Canola | nucleus | 45.82 | 29.72 |
| VIT_08s0040g00070.t01 | Wine grape | nucleus | 45.48 | 29.63 |
| KRG89867 | Soybean | nucleus | 46.66 | 29.46 |
| VIT_13s0175g00140.t01 | Wine grape | nucleus | 43.48 | 29.38 |
| CDY04475 | Canola | nucleus | 45.32 | 29.36 |
| AT2G27040.1 | Thale cress | nucleus | 45.32 | 29.33 |
| CDY56413 | Canola | nucleus | 44.98 | 29.14 |
| Bra020152.1-P | Field mustard | nucleus | 43.48 | 28.7 |
| CDY09103 | Canola | nucleus | 43.48 | 28.7 |
| HORVU0Hr1G012490.1 | Barley | nucleus | 41.97 | 28.43 |
| AT5G21150.1 | Thale cress | nucleus | 41.97 | 28.01 |
| Bra002361.1-P | Field mustard | nucleus | 42.14 | 27.66 |
| KRH56276 | Soybean | cytosol | 38.29 | 27.56 |
| CDY59516 | Canola | nucleus | 41.64 | 27.48 |
| CDX92406 | Canola | nucleus | 41.3 | 27.32 |
| CDX92405 | Canola | nucleus | 41.81 | 27.32 |
| AT5G21030.2 | Thale cress | cytosol | 38.96 | 27.28 |
| CDY16587 | Canola | nucleus | 39.63 | 26.87 |
| Bra002360.1-P | Field mustard | nucleus | 41.14 | 26.45 |
| CDY16595 | Canola | nucleus | 37.29 | 24.24 |
| HORVU2Hr1G045050.1 | Barley | cytosol, mitochondrion, plastid | 7.86 | 23.04 |
| Solyc03g111760.2.1 | Tomato | mitochondrion | 35.28 | 23.03 |
| CDX92417 | Canola | nucleus | 24.58 | 22.83 |
| CDY62055 | Canola | nucleus | 21.57 | 22.4 |
| HORVU2Hr1G031130.2 | Barley | cytosol, nucleus | 23.58 | 16.73 |
| HORVU6Hr1G036840.2 | Barley | plastid | 26.25 | 16.54 |
| HORVU3Hr1G021290.1 | Barley | cytosol, nucleus | 28.09 | 15.98 |
| HORVU2Hr1G103840.1 | Barley | cytosol | 6.35 | 15.2 |
| HORVU7Hr1G120600.3 | Barley | cytosol, nucleus | 26.92 | 15.13 |
| HORVU4Hr1G004030.1 | Barley | mitochondrion | 24.58 | 14.23 |
| Bra002349.1-P | Field mustard | nucleus | 39.63 | 13.93 |
| HORVU7Hr1G007000.14 | Barley | nucleus | 27.26 | 13.39 |
| HORVU0Hr1G005350.1 | Barley | cytosol, golgi, mitochondrion | 20.07 | 11.86 |
| HORVU2Hr1G098650.1 | Barley | nucleus | 18.9 | 10.79 |
| HORVU2Hr1G098620.2 | Barley | nucleus | 16.39 | 9.62 |
| PGSC0003DMT400070806 | Potato | nucleus | 2.51 | 5.14 |
| CDY72062 | Canola | plastid | 2.51 | 5.05 |
| PGSC0003DMT400039204 | Potato | cytosol | 1.17 | 4.67 |
Protein Annotations
| Gene3D:2.170.260.10 | Gene3D:3.40.50.2300 | MapMan:35.1 | UniProt:A0A287XQR9 | InterPro:ArgoL1 | InterPro:ArgoL2 |
| InterPro:Argonaute_N | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0031047 | EnsemblPlantsGene:HORVU7Hr1G107770 | EnsemblPlants:HORVU7Hr1G107770.1 | InterPro:IPR003100 | InterPro:PAZ_dom |
| InterPro:PAZ_dom_sf | PFAM:PF02170 | PFAM:PF08699 | PFAM:PF16486 | PFAM:PF16488 | PFscan:PS50821 |
| PANTHER:PTHR22891 | PANTHER:PTHR22891:SF20 | InterPro:RNaseH-like_sf | SMART:SM01163 | SUPFAM:SSF101690 | SUPFAM:SSF53098 |
| UniParc:UPI000B470676 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chrchr7H:-:623890892..623896666
Molecular Weight (calculated)
67632.9 Da
IEP (calculated)
9.691
GRAVY (calculated)
-0.375
Length
598 amino acids
Sequence
(BLAST)
(BLAST)
001: MASFTTTTYK DVKPVVGEGV RRKEMDLKYE DDKPGVGEGM RRKVMRQLHE TYASSLAGKQ FAFDGETGLY TAGPLPFTTN VFEVVLVDAS SARIAAMSRS
101: PGGDGSPGPS DSKRMKQETP SKIFKVEITF AAKVPMNISS QDALRVLDII LRQHSAKQNC LLVRQSFFRK DSRYVELGGG VRGCQGFYSS FRPTQSGLSL
201: NVDLTTTMVV RPGPVIDFLL FNQDVKDTSR IDWRKAKRAL NKLRIETIHT KMELQIIGLS ENNCNELTFP LKQQDGTIVD VTVYDYFMNR WSTKMEKSAN
301: FPCLIAGKTN SPTYLPLEVC LLVPLQRYKK SLSTMQRSKL VEGSRQRPDQ RMLSLTGELR ANNYNSDPML RECGISIAPE FTQVEGRVLQ APQLIFADGR
401: ELHTPNGRWN FNNDKFIKPI KVETWGVVNF SARCNVEDLV GCLVRSGANK GIEMAKCGAV IEERHQMRRE PPTKRVEAMF QQIKAKLTRK PDFLFLLCVL
501: PEKNCDIYVV LTRTVEARMP CGTWYLYAML GSSCQYQRSV PHKCAAKDKC QAWRVKFIAK KGNSPCYSSR VEDANNYLWY GCFPWFTRTK LTISCCSG
101: PGGDGSPGPS DSKRMKQETP SKIFKVEITF AAKVPMNISS QDALRVLDII LRQHSAKQNC LLVRQSFFRK DSRYVELGGG VRGCQGFYSS FRPTQSGLSL
201: NVDLTTTMVV RPGPVIDFLL FNQDVKDTSR IDWRKAKRAL NKLRIETIHT KMELQIIGLS ENNCNELTFP LKQQDGTIVD VTVYDYFMNR WSTKMEKSAN
301: FPCLIAGKTN SPTYLPLEVC LLVPLQRYKK SLSTMQRSKL VEGSRQRPDQ RMLSLTGELR ANNYNSDPML RECGISIAPE FTQVEGRVLQ APQLIFADGR
401: ELHTPNGRWN FNNDKFIKPI KVETWGVVNF SARCNVEDLV GCLVRSGANK GIEMAKCGAV IEERHQMRRE PPTKRVEAMF QQIKAKLTRK PDFLFLLCVL
501: PEKNCDIYVV LTRTVEARMP CGTWYLYAML GSSCQYQRSV PHKCAAKDKC QAWRVKFIAK KGNSPCYSSR VEDANNYLWY GCFPWFTRTK LTISCCSG
001: MDSTNGNGAD LESANGANGS GVTEALPPPP PVIPPNVEPV RVKTELAEKK GPVRVPMARK GFGTRGQKIP LLTNHFKVDV ANLQGHFFHY SVALFYDDGR
101: PVEQKGVGRK ILDKVHQTYH SDLDGKEFAY DGEKTLFTYG ALPSNKMDFS VVLEEVSATR ANGNGSPNGN ESPSDGDRKR LRRPNRSKNF RVEISYAAKI
201: PLQALANAMR GQESENSQEA IRVLDIILRQ HAARQGCLLV RQSFFHNDPT NCEPVGGNIL GCRGFHSSFR TTQGGMSLNM DVTTTMIIKP GPVVDFLIAN
301: QNARDPYSID WSKAKRTLKN LRVKVSPSGQ EFKITGLSDK PCREQTFELK KRNPNENGEF ETTEVTVADY FRDTRHIDLQ YSADLPCINV GKPKRPTYIP
401: LELCALVPLQ RYTKALTTFQ RSALVEKSRQ KPQERMTVLS KALKVSNYDA EPLLRSCGIS ISSNFTQVEG RVLPAPKLKM GCGSETFPRN GRWNFNNKEF
501: VEPTKIQRWV VVNFSARCNV RQVVDDLIKI GGSKGIEIAS PFQVFEEGNQ FRRAPPMIRV ENMFKDIQSK LPGVPQFILC VLPDKKNSDL YGPWKKKNLT
601: EFGIVTQCMA PTRQPNDQYL TNLLLKINAK LGGLNSMLSV ERTPAFTVIS KVPTIILGMD VSHGSPGQSD VPSIAAVVSS REWPLISKYR ASVRTQPSKA
701: EMIESLVKKN GTEDDGIIKE LLVDFYTSSN KRKPEHIIIF RDGVSESQFN QVLNIELDQI IEACKLLDAN WNPKFLLLVA QKNHHTKFFQ PTSPENVPPG
801: TIIDNKICHP KNNDFYLCAH AGMIGTTRPT HYHVLYDEIG FSADELQELV HSLSYVYQRS TSAISVVAPI CYAHLAAAQL GTFMKFEDQS ETSSSHGGIT
901: APGPISVAQL PRLKDNVANS MFFC
101: PVEQKGVGRK ILDKVHQTYH SDLDGKEFAY DGEKTLFTYG ALPSNKMDFS VVLEEVSATR ANGNGSPNGN ESPSDGDRKR LRRPNRSKNF RVEISYAAKI
201: PLQALANAMR GQESENSQEA IRVLDIILRQ HAARQGCLLV RQSFFHNDPT NCEPVGGNIL GCRGFHSSFR TTQGGMSLNM DVTTTMIIKP GPVVDFLIAN
301: QNARDPYSID WSKAKRTLKN LRVKVSPSGQ EFKITGLSDK PCREQTFELK KRNPNENGEF ETTEVTVADY FRDTRHIDLQ YSADLPCINV GKPKRPTYIP
401: LELCALVPLQ RYTKALTTFQ RSALVEKSRQ KPQERMTVLS KALKVSNYDA EPLLRSCGIS ISSNFTQVEG RVLPAPKLKM GCGSETFPRN GRWNFNNKEF
501: VEPTKIQRWV VVNFSARCNV RQVVDDLIKI GGSKGIEIAS PFQVFEEGNQ FRRAPPMIRV ENMFKDIQSK LPGVPQFILC VLPDKKNSDL YGPWKKKNLT
601: EFGIVTQCMA PTRQPNDQYL TNLLLKINAK LGGLNSMLSV ERTPAFTVIS KVPTIILGMD VSHGSPGQSD VPSIAAVVSS REWPLISKYR ASVRTQPSKA
701: EMIESLVKKN GTEDDGIIKE LLVDFYTSSN KRKPEHIIIF RDGVSESQFN QVLNIELDQI IEACKLLDAN WNPKFLLLVA QKNHHTKFFQ PTSPENVPPG
801: TIIDNKICHP KNNDFYLCAH AGMIGTTRPT HYHVLYDEIG FSADELQELV HSLSYVYQRS TSAISVVAPI CYAHLAAAQL GTFMKFEDQS ETSSSHGGIT
901: APGPISVAQL PRLKDNVANS MFFC
Arabidopsis Description
AGO4Protein argonaute 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVD5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.