Factsheet for HORVU6Hr1G036840.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 1
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G166300.1	Wheat	plastid	95.57	95.37
TraesCS6A01G178100.2	Wheat	plastid	94.84	94.94
TraesCS6B01G206700.1	Wheat	plastid	94.63	94.73
GSMUA_Achr4P30720_001	Banana	nucleus	73.76	75.03
GSMUA_Achr6P05310_001	Banana	nucleus	72.92	74.57
GSMUA_Achr7P13220_001	Banana	cytosol	70.5	70.72
VIT_11s0016g04620.t01	Wine grape	cytosol	66.49	69.72
KRH03770	Soybean	nucleus	65.33	68.66
KRH54842	Soybean	nucleus	65.65	68.54
KRH63036	Soybean	cytosol	65.54	68.43
KRH56656	Soybean	cytosol	65.23	68.17
Solyc12g006790.1.1	Tomato	nucleus	65.54	66.67
PGSC0003DMT400053301	Potato	nucleus	63.44	65.43
HORVU7Hr1G120600.3	Barley	cytosol, nucleus	61.85	55.17
HORVU2Hr1G031130.2	Barley	cytosol, nucleus	47.84	53.86
HORVU7Hr1G007000.14	Barley	nucleus	62.07	48.4
HORVU2Hr1G045050.1	Barley	cytosol, mitochondrion, plastid	9.91	46.08
HORVU4Hr1G004030.1	Barley	mitochondrion	48.16	44.24
HORVU3Hr1G021290.1	Barley	cytosol, nucleus	45.21	40.82
HORVU2Hr1G103840.1	Barley	cytosol	9.91	37.6
HORVU0Hr1G012490.1	Barley	nucleus	32.67	35.11
HORVU3Hr1G038830.1	Barley	nucleus	32.46	33.41
HORVU0Hr1G005350.1	Barley	cytosol, golgi, mitochondrion	32.03	30.04
HORVU2Hr1G098650.1	Barley	nucleus	30.35	27.51
HORVU7Hr1G107770.1	Barley	nucleus	16.54	26.25
HORVU2Hr1G098620.2	Barley	nucleus	25.5	23.75

Protein Annotations

MapMan:16.10.3	Gene3D:2.170.260.10	Gene3D:3.30.420.10	Gene3D:3.40.50.2300	UniProt:A0A287TXR3	InterPro:ArgoL1
InterPro:ArgoL2	InterPro:Argonaute_Mid_dom	InterPro:Argonaute_N	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488
GO:GO:0005515	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0031047	EnsemblPlantsGene:HORVU6Hr1G036840
EnsemblPlants:HORVU6Hr1G036840.2	InterPro:IPR003100	InterPro:IPR003165	InterPro:IPR036397	InterPro:PAZ_dom	InterPro:PAZ_dom_sf
PFAM:PF02170	PFAM:PF02171	PFAM:PF08699	PFAM:PF16486	PFAM:PF16487	PFAM:PF16488
PFscan:PS50821	PFscan:PS50822	PANTHER:PTHR22891	PANTHER:PTHR22891:SF45	InterPro:Piwi	InterPro:RNaseH-like_sf
InterPro:RNaseH_sf	SMART:SM00949	SMART:SM00950	SMART:SM01163	SUPFAM:SSF101690	SUPFAM:SSF53098
UniParc:UPI000B467AF5	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr6H:-:183574909..183587426

Molecular Weight (calculated)

105654.0 Da

IEP (calculated)

9.763

GRAVY (calculated)

-0.321

Length

949 amino acids

Sequence
(BLAST)

001: MLEVLEVPWT VVGGKAAGGR PGAPRRQALQ SSLAQPKAAA RSPGAGGKKC NSGASGPRRN GARARSNEEA AAAVPAACTG VVAVAPAEPP PVSSKGLELC
101: RRPGFGRAGT RCVVKTNHFL AEVADKDLTQ YDVKITPDVR SRTVNRAVVA ELVRLYRASD LGMRLPAYDG RSNLYTAGRL PFDAREFVVR LAVDDGSVSG
201: ATAREKEYKV AIKFAASADL RHLREFMAGR QPDEPQGAVQ VLDVVLREVA SQRYLSVRRS FYSPDIRTPQ RLGDGLQSWF GFYQSIRPTQ MGLSLNIDMS
301: STAFVEPLPV VDFAAQILGK DVMTRPLSDT NRVTIKKALR DLKVEITHRG SLRRKYRVFG LTAQPTHELI FPVDDEMKSV VEYFKEMYGF AIKQPHLPCL
401: LVGNQKKPNY LPMEACKIVE GQRYKKKLNE KQITSLLKVT CQRPGDKEMD IRRTVHQNGY DQDPYAKEFG INISNKLTSI EARILPAPWL KYHDTGKESE
501: CLPRVGQWDM KNKKVVNGCT VNHWASINFS RSVQESTASG FCQELAQTCK ILGMEFNSEP AIPMYSARPE QAVQALKHVY NAALKKLKGK ELELVLVILP
601: DNNGPLYGDI KRICETELGL ISQCCLAKHV FKICKRYLVN VSLKINVKMG GRNTVLLDAV SRRIPLVSDI PTIIFGADVT HPETREDTSP SIAAVVASQD
701: WPEVTKYAGL VCAQAYRQEL IQDLYKTWHD PQRGTVTGGM IRELLISFRK ATGQKPLRII FYRDGVSAGQ FHQVLLYELD AIRKACASLE PNYQPPVTFV
801: IVQKRHHTKL FANNHNDKSS TDKSGNILPG TVVDSKICHP TQFDFYLCSH AGIQGTSKPA HYHVLWDENN FTADEMQTLT NNLCYTYARC TRSVSVVPPV
901: YYAHLAAFRA RFYMDQDSLS VKNANGRNGS AMKTMPAVKE KVKKVMFYC

Best Arabidopsis Sequence Match ( AT1G48410.1 )
(BLAST)

0001: MVRKRRTDAP SEGGEGSGSR EAGPVSGGGR GSQRGGFQQG GGQHQGGRGY TPQPQQGGRG GRGYGQPPQQ QQQYGGPQEY QGRGRGGPPH QGGRGGYGGG
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC

Arabidopsis Description

AGO1ICU9 [Source:UniProtKB/TrEMBL;Acc:A0A178WL72]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.