Factsheet for HORVU2Hr1G103840.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
ChloroP:	plastid
MultiLoc:	cytosol
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G045050.1	Barley	cytosol, mitochondrion, plastid	28.4	34.8
CDY04311	Canola	cytosol, nucleus, plastid	46.4	11.84
Solyc03g098280.2.1	Tomato	nucleus	45.2	11.53
CDY41831	Canola	nucleus	47.6	11.4
CDY68174	Canola	nucleus	47.6	11.31
Solyc06g072300.2.1	Tomato	nucleus	47.6	11.29
PGSC0003DMT400069313	Potato	cytosol	47.2	11.2
Bra014136.1-P	Field mustard	nucleus	47.6	11.03
CDY23683	Canola	cytosol, nucleus, plastid	46.8	10.77
HORVU7Hr1G007000.14	Barley	nucleus	52.4	10.76
AT1G48410.2	Thale cress	nucleus	45.2	10.76
VIT_17s0053g00680.t01	Wine grape	nucleus	46.4	10.69
Bra032254.1-P	Field mustard	nucleus	46.8	10.53
PGSC0003DMT400079716	Potato	nucleus	46.4	10.29
HORVU6Hr1G036840.2	Barley	plastid	37.6	9.91
HORVU7Hr1G120600.3	Barley	cytosol, nucleus	40.8	9.59
HORVU3Hr1G021290.1	Barley	cytosol, nucleus	33.6	7.99
HORVU2Hr1G031130.2	Barley	cytosol, nucleus	26.8	7.95
HORVU4Hr1G004030.1	Barley	mitochondrion	31.2	7.55
HORVU7Hr1G107770.1	Barley	nucleus	15.2	6.35
HORVU0Hr1G012490.1	Barley	nucleus	20.0	5.66
HORVU3Hr1G038830.1	Barley	nucleus	20.8	5.64
HORVU0Hr1G005350.1	Barley	cytosol, golgi, mitochondrion	16.8	4.15
VIT_19s0014g01840.t01	Wine grape	cytosol, nucleus, plastid	12.4	3.99
HORVU2Hr1G098650.1	Barley	nucleus	15.2	3.63
HORVU2Hr1G098620.2	Barley	nucleus	9.6	2.36
GSMUA_AchrUn_...	Banana	cytosol	0.8	1.02
GSMUA_AchrUn_...	Banana	cytosol	1.2	0.99
KRG99173	Soybean	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:HORVU2Hr1G103840.1	EnsemblPlantsGene:HORVU2Hr1G103840	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:Argonaut_Gly-rich
InterPro:Argonaute_N	InterPro:PAZ_dom_sf	PANTHER:PTHR22891	PANTHER:PTHR22891:SF102	PFAM:PF12764	PFAM:PF16486
SEG:seg	SUPFAM:SSF101690	UniParc:UPI000B46CA80	UniProt:A0A287J964	MapMan:35.1	:

Description

No Description!

Coordinates

chrchr2H:-:700926726..700931980

Molecular Weight (calculated)

27724.0 Da

IEP (calculated)

9.927

GRAVY (calculated)

-0.451

Length

250 amino acids

Sequence
(BLAST)

001: MVGTGEVVLD VMFLQVNQEQ FPSCTKPPHV QYQAPMVSPS ASGAGSSSQS LAEVSSGQVQ QQFQNFAIVD QSSTSQGSQL APASSKSVRF SLRPGKGTHG
101: DRCVVKANHF FAKLPDKDLH QYDVSITPQI TSRGVNRVVM AELVRLYRHS HLDGRLPAYD GRKSLYTAGP LPFPSRTFEI TLHDEEESLG GGQVAPRHER
201: QFRVVIKFAA RADLHHLAMF LAGRQPDAPQ EALHLLNMRR QQISRMHKDR

Best Arabidopsis Sequence Match ( AT1G48410.1 )
(BLAST)

0001: MVRKRRTDAP SEGGEGSGSR EAGPVSGGGR GSQRGGFQQG GGQHQGGRGY TPQPQQGGRG GRGYGQPPQQ QQQYGGPQEY QGRGRGGPPH QGGRGGYGGG
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC

Arabidopsis Description

AGO1ICU9 [Source:UniProtKB/TrEMBL;Acc:A0A178WL72]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.