Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY41831 | Canola | nucleus | 98.29 | 99.04 |
| Bra014136.1-P | Field mustard | nucleus | 99.43 | 96.94 |
| CDY04311 | Canola | cytosol, nucleus, plastid | 88.97 | 95.51 |
| AT1G48410.2 | Thale cress | nucleus | 90.97 | 91.14 |
| CDY23683 | Canola | cytosol, nucleus, plastid | 93.06 | 90.15 |
| Zm00001d044183_P001 | Maize | cytosol | 13.97 | 81.22 |
| VIT_19s0014g01840.t01 | Wine grape | cytosol, nucleus, plastid | 59.6 | 80.69 |
| Zm00001d037833_P001 | Maize | mitochondrion | 18.82 | 79.84 |
| Solyc03g098280.2.1 | Tomato | nucleus | 73.38 | 78.78 |
| Solyc06g072300.2.1 | Tomato | nucleus | 78.71 | 78.56 |
| PGSC0003DMT400069313 | Potato | cytosol | 78.42 | 78.27 |
| KRH38925 | Soybean | endoplasmic reticulum | 78.33 | 77.88 |
| KRH09472 | Soybean | nucleus | 77.66 | 77.59 |
| VIT_17s0053g00680.t01 | Wine grape | nucleus | 78.9 | 76.5 |
| GSMUA_Achr3P13970_001 | Banana | nucleus | 76.62 | 76.04 |
| TraesCS7D01G552900.1 | Wheat | mitochondrion | 32.6 | 75.38 |
| OQU82149 | Sorghum | nucleus | 76.43 | 74.65 |
| GSMUA_AchrUn_... | Banana | cytosol | 13.88 | 74.49 |
| Os02t0672200-01 | Rice | cytosol | 75.57 | 73.47 |
| GSMUA_Achr1P17950_001 | Banana | nucleus | 73.57 | 73.36 |
| Os04t0566500-04 | Rice | nucleus | 76.71 | 73.3 |
| TraesCS2D01G400200.1 | Wheat | nucleus | 76.43 | 73.16 |
| TraesCS7D01G553200.1 | Wheat | nucleus, plastid | 33.27 | 73.07 |
| TraesCS2B01G421000.2 | Wheat | nucleus | 76.43 | 72.96 |
| TraesCSU01G081900.1 | Wheat | plastid | 67.59 | 72.7 |
| PGSC0003DMT400079716 | Potato | nucleus | 77.57 | 72.4 |
| TraesCS2A01G403100.4 | Wheat | nucleus | 76.43 | 71.79 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 72.34 | 71.52 |
| Zm00001d002650_P003 | Maize | nucleus | 76.33 | 71.31 |
| GSMUA_Achr3P27070_001 | Banana | nucleus | 72.81 | 71.19 |
| GSMUA_Achr1P07120_001 | Banana | cytosol | 71.48 | 71.14 |
| Zm00001d026111_P014 | Maize | nucleus | 73.67 | 70.78 |
| TraesCS6B01G466700.1 | Wheat | nucleus | 67.87 | 70.48 |
| Os02t0831600-01 | Rice | extracellular | 67.68 | 70.43 |
| EES18841 | Sorghum | nucleus | 74.05 | 70.24 |
| Zm00001d011096_P059 | Maize | nucleus | 73.1 | 69.4 |
| GSMUA_Achr7P04100_001 | Banana | extracellular | 16.35 | 69.35 |
| TraesCS6A01G254600.2 | Wheat | plastid | 71.39 | 69.22 |
| Zm00001d025073_P001 | Maize | cytosol | 25.48 | 69.07 |
| Zm00001d025331_P002 | Maize | cytosol | 36.22 | 69.02 |
| TraesCS6B01G270900.1 | Wheat | nucleus | 71.1 | 68.94 |
| Os06t0729300-01 | Rice | nucleus | 67.68 | 68.59 |
| CDY22332 | Canola | plastid | 63.5 | 68.51 |
| CDX94724 | Canola | plastid | 63.78 | 68.4 |
| KXG20965 | Sorghum | nucleus | 67.97 | 68.23 |
| TraesCS6D01G403900.1 | Wheat | plastid | 68.35 | 68.15 |
| TraesCS6D01G235900.1 | Wheat | endoplasmic reticulum | 71.58 | 67.66 |
| TraesCSU01G065300.1 | Wheat | nucleus | 76.43 | 67.45 |
| Zm00001d035747_P027 | Maize | endoplasmic reticulum, plastid | 73.19 | 67.01 |
| TraesCS7D01G553000.1 | Wheat | cytosol | 65.3 | 66.63 |
| TraesCS7A01G557400.1 | Wheat | plastid | 65.3 | 66.57 |
| TraesCS7B01G482100.1 | Wheat | nucleus | 65.3 | 66.57 |
| TraesCS7D01G036100.3 | Wheat | endoplasmic reticulum, golgi | 76.33 | 66.36 |
| TraesCS7A01G040700.5 | Wheat | endoplasmic reticulum, golgi, vacuole | 76.05 | 66.12 |
| HORVU7Hr1G120600.3 | Barley | cytosol, nucleus | 64.92 | 64.19 |
| HORVU7Hr1G007000.14 | Barley | nucleus | 73.57 | 63.6 |
| OQU86027 | Sorghum | plastid | 65.68 | 62.59 |
| Zm00001d014875_P001 | Maize | nucleus | 63.69 | 62.09 |
| TraesCS3B01G027100.1 | Wheat | cytosol | 8.94 | 61.44 |
| TraesCS2A01G258200.1 | Wheat | cytosol | 38.5 | 60.81 |
| GSMUA_AchrUn_... | Banana | cytosol | 16.64 | 57.57 |
| CDX71410 | Canola | nucleus | 52.09 | 57.56 |
| CDY04517 | Canola | plastid | 51.9 | 57.05 |
| TraesCS1D01G151300.3 | Wheat | plastid | 44.58 | 55.24 |
| TraesCS5B01G116900.5 | Wheat | cytosol, mitochondrion, nucleus, plastid | 44.49 | 55.12 |
| TraesCS2A01G258100.1 | Wheat | mitochondrion | 44.68 | 53.65 |
| Os02t0169400-01 | Rice | nucleus | 44.3 | 53.2 |
| HORVU2Hr1G103840.1 | Barley | cytosol | 11.31 | 47.6 |
| CDY68123 | Canola | cytosol, endoplasmic reticulum, nucleus | 10.08 | 44.92 |
| CDY72062 | Canola | plastid | 12.36 | 43.77 |
| CDX92417 | Canola | nucleus | 22.81 | 37.27 |
| CDX84712 | Canola | nucleus | 30.51 | 37.02 |
| CDX79495 | Canola | nucleus | 30.23 | 36.68 |
| CDY09103 | Canola | nucleus | 30.42 | 35.32 |
| CDY51501 | Canola | nucleus | 30.13 | 35.26 |
| CDY16587 | Canola | nucleus | 29.56 | 35.26 |
| CDX92406 | Canola | nucleus | 30.13 | 35.07 |
| CDY48192 | Canola | nucleus | 30.7 | 35.03 |
| CDX77061 | Canola | nucleus | 30.61 | 34.92 |
| CDY59516 | Canola | nucleus | 29.94 | 34.77 |
| CDY56413 | Canola | nucleus | 30.32 | 34.56 |
| CDY04475 | Canola | nucleus | 30.23 | 34.45 |
| CDX92405 | Canola | nucleus | 29.94 | 34.43 |
| CDY07349 | Canola | nucleus | 32.13 | 34.35 |
| CDY28550 | Canola | cytosol, plastid | 31.84 | 34.32 |
| CDY70429 | Canola | plastid | 27.95 | 33.15 |
| CDY02373 | Canola | nucleus | 30.13 | 30.99 |
| CDY25885 | Canola | cytosol | 29.37 | 30.59 |
| CDY55876 | Canola | cytosol | 29.85 | 30.34 |
| CDY16595 | Canola | nucleus | 26.43 | 30.22 |
| CDY62055 | Canola | nucleus | 12.45 | 22.74 |
Protein Annotations
| MapMan:16.10.3 | Gene3D:2.170.260.10 | Gene3D:3.30.420.10 | Gene3D:3.40.50.2300 | GO:A0A078JMZ3 | UniProt:A0A078JMZ3 |
| InterPro:ArgoL1 | InterPro:ArgoL2 | InterPro:Argonaut_Gly-rich | InterPro:Argonaute_Mid_dom | InterPro:Argonaute_N | EnsemblPlants:CDY68174 |
| ProteinID:CDY68174 | ProteinID:CDY68174.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0031047 | EnsemblPlantsGene:GSBRNA2T00070016001 | InterPro:IPR003100 |
| InterPro:IPR003165 | InterPro:IPR036397 | InterPro:PAZ_dom | InterPro:PAZ_dom_sf | PFAM:PF02170 | PFAM:PF02171 |
| PFAM:PF08699 | PFAM:PF12764 | PFAM:PF16486 | PFAM:PF16487 | PFAM:PF16488 | PFscan:PS50821 |
| PFscan:PS50822 | PANTHER:PTHR22891 | PANTHER:PTHR22891:SF102 | InterPro:Piwi | InterPro:RNaseH-like_sf | InterPro:RNaseH_sf |
| SMART:SM00949 | SMART:SM00950 | SMART:SM01163 | SUPFAM:SSF101690 | SUPFAM:SSF53098 | UniParc:UPI0004EE63EE |
| SEG:seg | : | : | : | : | : |
Description
BnaC08g46720DBnaC08g46720D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JMZ3]
Coordinates
chrLK036934:-:1192..6482
Molecular Weight (calculated)
116786.0 Da
IEP (calculated)
9.749
GRAVY (calculated)
-0.539
Length
1052 amino acids
Sequence
(BLAST)
(BLAST)
0001: MVRKKRTDGS SEGGEGSGSR EAGPHSGGGR GRGGYQQRGG RGGGGQQQGG RGYGPQSQQG GRGYGQPPQQ YGGPREGQPP QHQHQQQYGG PRGGPPRGGH
0101: GGGGRGGAPS AGQPQRQSVP ELHQATSPTY QAVSSQPTPS EVSPTRIPDT SAPVQEFEQL SIEQGASSQA IQPIPSSSKA FKFPMRPGKG QIGKRCMVKA
0201: NHFFAELPDK DLHQYDVTIT PEVTSRGVNR AVMKQLVDLY RESHLGRRLP AYDGRKSLYT AGPLPFVSKE FRILLHDEEE GAGGQRRERE FKVVIKLAAR
0301: ADLHHLGMFL QGKQADAPQE ALQVLDIVLR ELPTSKYTPV ARSFYSPDIG RKQSLGDGLE SWRGFYQSIR PTQMGLSLNI DMSSTAFIEA LPVTEFVCQL
0401: LNRDIRSRPL SDADRVKIKK ALRGVKVEVT HRGNMRRKYR ISGLTAVATR ELTFPVDERN TQKSVVEYFY ETYGFRIQHT QLPCLQVGNS NRPNYLPMEV
0501: CKIVEGQRYS KRLNERQITA LLKVTCQRPQ EREKDILRTV ELNDYSHDPY AKEFGIKISA SLASVEARIL PPPWLKYHES GREGTCLPQV GQWNMMNKKM
0601: INGGTVSNWI CINFSRQVPD NMARSFCQEL AQMCHISGMA FNPEPVLPPV SARPEHVEKV LKTRYHDAMA KLSQGKEIDL LIVILPDNNG SLYGDLKRIC
0701: ETELGIVSQC CLTKHVFKMS KQYMANVALK INVKVGGRNT VLVDALSRRI PLVSDRPTII FGADVTHPHP GEDSSPSIAA VVASQDWPEV TKYAGLVCAQ
0801: AHRQELIQDL FKEWKDPQKG VVTGGMIKEL LIAFRRSTGH KPLRIIFYRD GVSEGQFYQV LLYELDAIRK ACASLEAGYQ PPVTFVVVQK RHHTRLFAQN
0901: HNDRNSVDRS GNILPGTVVD SKICHPTEFD FYLCSHAGIQ GTSRPAHYHV LWDENNFSAD GLQSLTNNLC YTYARCTRSV SIVPPAYYAH LAAFRARFYM
1001: EPETSDSGSM ASGSMARGGG MGGRNMRGPH VNAAVRPLPP LKDNVKRVMF YC
0101: GGGGRGGAPS AGQPQRQSVP ELHQATSPTY QAVSSQPTPS EVSPTRIPDT SAPVQEFEQL SIEQGASSQA IQPIPSSSKA FKFPMRPGKG QIGKRCMVKA
0201: NHFFAELPDK DLHQYDVTIT PEVTSRGVNR AVMKQLVDLY RESHLGRRLP AYDGRKSLYT AGPLPFVSKE FRILLHDEEE GAGGQRRERE FKVVIKLAAR
0301: ADLHHLGMFL QGKQADAPQE ALQVLDIVLR ELPTSKYTPV ARSFYSPDIG RKQSLGDGLE SWRGFYQSIR PTQMGLSLNI DMSSTAFIEA LPVTEFVCQL
0401: LNRDIRSRPL SDADRVKIKK ALRGVKVEVT HRGNMRRKYR ISGLTAVATR ELTFPVDERN TQKSVVEYFY ETYGFRIQHT QLPCLQVGNS NRPNYLPMEV
0501: CKIVEGQRYS KRLNERQITA LLKVTCQRPQ EREKDILRTV ELNDYSHDPY AKEFGIKISA SLASVEARIL PPPWLKYHES GREGTCLPQV GQWNMMNKKM
0601: INGGTVSNWI CINFSRQVPD NMARSFCQEL AQMCHISGMA FNPEPVLPPV SARPEHVEKV LKTRYHDAMA KLSQGKEIDL LIVILPDNNG SLYGDLKRIC
0701: ETELGIVSQC CLTKHVFKMS KQYMANVALK INVKVGGRNT VLVDALSRRI PLVSDRPTII FGADVTHPHP GEDSSPSIAA VVASQDWPEV TKYAGLVCAQ
0801: AHRQELIQDL FKEWKDPQKG VVTGGMIKEL LIAFRRSTGH KPLRIIFYRD GVSEGQFYQV LLYELDAIRK ACASLEAGYQ PPVTFVVVQK RHHTRLFAQN
0901: HNDRNSVDRS GNILPGTVVD SKICHPTEFD FYLCSHAGIQ GTSRPAHYHV LWDENNFSAD GLQSLTNNLC YTYARCTRSV SIVPPAYYAH LAAFRARFYM
1001: EPETSDSGSM ASGSMARGGG MGGRNMRGPH VNAAVRPLPP LKDNVKRVMF YC
0001: MVRKRRTDAP SEGGEGSGSR EAGPVSGGGR GSQRGGFQQG GGQHQGGRGY TPQPQQGGRG GRGYGQPPQQ QQQYGGPQEY QGRGRGGPPH QGGRGGYGGG
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC
Arabidopsis Description
AGO1ICU9 [Source:UniProtKB/TrEMBL;Acc:A0A178WL72]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.