Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDX84712 | Canola | nucleus | 97.69 | 97.69 |
CDY68123 | Canola | cytosol, endoplasmic reticulum, nucleus | 24.68 | 90.68 |
AT2G32940.1 | Thale cress | nucleus | 85.24 | 84.17 |
Os07t0265600-01 | Rice | cytosol, nucleus | 24.68 | 69.26 |
VIT_12s0059g01430.t01 | Wine grape | nucleus | 65.17 | 61.41 |
KXG23356 | Sorghum | nucleus | 62.4 | 61.41 |
KRH20672 | Soybean | nucleus | 63.55 | 60.35 |
TraesCS5D01G169500.1 | Wheat | cytosol | 60.9 | 59.86 |
TraesCS5A01G165900.1 | Wheat | cytosol | 60.78 | 59.68 |
HORVU0Hr1G012490.1 | Barley | nucleus | 60.67 | 59.57 |
CDY72062 | Canola | plastid | 20.18 | 58.92 |
Solyc07g049500.2.1 | Tomato | nucleus | 61.36 | 58.91 |
TraesCS5B01G162300.1 | Wheat | mitochondrion | 60.9 | 58.8 |
GSMUA_Achr9P22630_001 | Banana | nucleus | 60.55 | 58.59 |
Zm00001d019905_P003 | Maize | nucleus | 61.36 | 57.76 |
CDX92417 | Canola | nucleus | 40.72 | 54.81 |
GSMUA_Achr9P27810_001 | Banana | plastid | 54.21 | 53.96 |
CDY09103 | Canola | nucleus | 55.25 | 52.87 |
CDY16587 | Canola | nucleus | 53.4 | 52.49 |
CDY04475 | Canola | nucleus | 54.67 | 51.35 |
CDY56413 | Canola | nucleus | 54.67 | 51.35 |
CDY48192 | Canola | nucleus | 54.56 | 51.3 |
CDX92405 | Canola | nucleus | 54.09 | 51.26 |
CDX92406 | Canola | nucleus | 53.4 | 51.22 |
CDX77061 | Canola | nucleus | 54.44 | 51.19 |
CDY59516 | Canola | nucleus | 53.06 | 50.77 |
CDY16595 | Canola | nucleus | 47.87 | 45.11 |
CDY62055 | Canola | nucleus | 22.38 | 33.68 |
CDX71410 | Canola | nucleus | 35.06 | 31.93 |
CDX94724 | Canola | plastid | 35.99 | 31.8 |
CDY22332 | Canola | plastid | 35.76 | 31.79 |
CDY04517 | Canola | plastid | 35.06 | 31.77 |
CDY04311 | Canola | cytosol, nucleus, plastid | 35.76 | 31.63 |
CDY41831 | Canola | nucleus | 36.68 | 30.46 |
CDY68174 | Canola | nucleus | 36.68 | 30.23 |
CDY23683 | Canola | cytosol, nucleus, plastid | 35.64 | 28.45 |
CDY70429 | Canola | plastid | 27.68 | 27.06 |
CDY51501 | Canola | nucleus | 27.68 | 26.7 |
CDY07349 | Canola | nucleus | 29.41 | 25.91 |
CDY28550 | Canola | cytosol, plastid | 28.84 | 25.61 |
CDY25885 | Canola | cytosol | 28.26 | 24.26 |
CDY55876 | Canola | cytosol | 28.14 | 23.57 |
CDY02373 | Canola | nucleus | 27.68 | 23.46 |
Protein Annotations
MapMan:12.5.1.13 | Gene3D:2.170.260.10 | Gene3D:3.30.420.10 | Gene3D:3.40.50.2300 | GO:A0A078CRP3 | InterPro:ArgoL1 |
InterPro:ArgoL2 | InterPro:Argonaute_N | EnsemblPlants:CDX79495 | ProteinID:CDX79495 | ProteinID:CDX79495.1 | GO:GO:0003674 |
GO:GO:0003676 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00132241001 | InterPro:IPR003100 | InterPro:IPR003165 |
InterPro:IPR036397 | InterPro:PAZ_dom | InterPro:PAZ_dom_sf | PFAM:PF02170 | PFAM:PF02171 | PFAM:PF08699 |
PFAM:PF16486 | PFAM:PF16488 | PFscan:PS50821 | PFscan:PS50822 | PANTHER:PTHR22891 | PANTHER:PTHR22891:SF35 |
InterPro:Piwi | InterPro:RNaseH-like_sf | InterPro:RNaseH_sf | SMART:SM00950 | SMART:SM01163 | SUPFAM:SSF101690 |
SUPFAM:SSF53098 | UniParc:UPI0004EDE273 | SEG:seg | : | : | : |
Description
BnaC03g18310D
Coordinates
chrLK031818:+:378890..383625
Molecular Weight (calculated)
97375.4 Da
IEP (calculated)
9.008
GRAVY (calculated)
-0.299
Length
867 amino acids
Sequence
(BLAST)
(BLAST)
001: MPVTPEEPSR RDYAVTARLG VGSTGRRVQL CTNHFNVSVG QPDVVFYQYT VSITTEDGEN VQGKGISRKL IDQLYKTYSS DLDGKRLAFD GDKTLYTVGP
101: LPQNDFDFQV ILEASFSKRD CGVSDGGSPS GACKRSKRSF LPRCYRVQIR FSAEIPLKSV LVAQRGVDTS DNSTQDAIRV LDIVLRQQAA ERGCLLVRQA
201: FFHNDMNSVD VGGGVIGIRG FHSSFRPTHG GLSLNIDVST TMILKPGPVI EFLKANQNVE LPRQIDWIKA SKMLKHLRVK ASHRNMEFKI IGLSAKPCNQ
301: QLFTMKIKDG ECEGQTKEIT VYEYFKQTYT EPTYSAYLPC LDVGKPDRPN YLPLEFCNLV SLQRYTKALS VRQRALLVEK SRQKPLERIK ALNDAMHTYC
401: YDKDPFLAGS SISIEKQMTL AEGRVLNPPT LKFGKNEDFL PSNGRWNFNK KMLLEPRAIK NWAVVNFSFP CDSSHISREL ISCGMRKGIE IDRPFALVEE
501: EPQSKNLSAV KRVEKMIAKM KSKFPIDPPH FILCVLPERK NSDIYGPWKK VCLTEAGINT QCICPTKIND QYLTNVLLKI NSKLGGINSL LGIECSSNIP
601: LINKIPTLIL GMDVSHGSPG RADVPSVAAV VGSKNWPLIS RYRAAVRTQS PKMEMIDSLF QPVEDPVNGD NGIMNELFVE FFKTSNARKP KQIIIFRDGV
701: SESQFNQVLN IEVDQIIKAY QRLGETDVPK FTVIVAQKRH HTKLFQAKGH ENVPAGTVVD TKIVHPTNYD FYMCAHAGII GTSRPAHYHV LLDEIGFSPD
801: ELQNLIHSLS YVNQRSTTAT SIVAPVRYAH LAAAQFAQFT KFEDISEEKV PELPRLHERV ESNMFFC
101: LPQNDFDFQV ILEASFSKRD CGVSDGGSPS GACKRSKRSF LPRCYRVQIR FSAEIPLKSV LVAQRGVDTS DNSTQDAIRV LDIVLRQQAA ERGCLLVRQA
201: FFHNDMNSVD VGGGVIGIRG FHSSFRPTHG GLSLNIDVST TMILKPGPVI EFLKANQNVE LPRQIDWIKA SKMLKHLRVK ASHRNMEFKI IGLSAKPCNQ
301: QLFTMKIKDG ECEGQTKEIT VYEYFKQTYT EPTYSAYLPC LDVGKPDRPN YLPLEFCNLV SLQRYTKALS VRQRALLVEK SRQKPLERIK ALNDAMHTYC
401: YDKDPFLAGS SISIEKQMTL AEGRVLNPPT LKFGKNEDFL PSNGRWNFNK KMLLEPRAIK NWAVVNFSFP CDSSHISREL ISCGMRKGIE IDRPFALVEE
501: EPQSKNLSAV KRVEKMIAKM KSKFPIDPPH FILCVLPERK NSDIYGPWKK VCLTEAGINT QCICPTKIND QYLTNVLLKI NSKLGGINSL LGIECSSNIP
601: LINKIPTLIL GMDVSHGSPG RADVPSVAAV VGSKNWPLIS RYRAAVRTQS PKMEMIDSLF QPVEDPVNGD NGIMNELFVE FFKTSNARKP KQIIIFRDGV
701: SESQFNQVLN IEVDQIIKAY QRLGETDVPK FTVIVAQKRH HTKLFQAKGH ENVPAGTVVD TKIVHPTNYD FYMCAHAGII GTSRPAHYHV LLDEIGFSPD
801: ELQNLIHSLS YVNQRSTTAT SIVAPVRYAH LAAAQFAQFT KFEDISEEKV PELPRLHERV ESNMFFC
001: METSSSLPLS PISIEPEQPS HRDYDITTRR GVGTTGNPIE LCTNHFNVSV RQPDVVFYQY TVSITTENGD AVDGTGISRK LMDQLFKTYS SDLDGKRLAY
101: DGEKTLYTVG PLPQNEFDFL VIVEGSFSKR DCGVSDGGSS SGTCKRSKRS FLPRSYKVQI HYAAEIPLKT VLGTQRGAYT PDKSAQDALR VLDIVLRQQA
201: AERGCLLVRQ AFFHSDGHPM KVGGGVIGIR GLHSSFRPTH GGLSLNIDVS TTMILEPGPV IEFLKANQSV ETPRQIDWIK AAKMLKHMRV KATHRNMEFK
301: IIGLSSKPCN QQLFSMKIKD GEREVPIREI TVYDYFKQTY TEPISSAYFP CLDVGKPDRP NYLPLEFCNL VSLQRYTKPL SGRQRVLLVE SSRQKPLERI
401: KTLNDAMHTY CYDKDPFLAG CGISIEKEMT QVEGRVLKPP MLKFGKNEDF QPCNGRWNFN NKMLLEPRAI KSWAIVNFSF PCDSSHISRE LISCGMRKGI
501: EIDRPFALVE EDPQYKKAGP VERVEKMIAT MKLKFPDPPH FILCILPERK TSDIYGPWKK ICLTEEGIHT QCICPIKISD QYLTNVLLKI NSKLGGINSL
601: LGIEYSYNIP LINKIPTLIL GMDVSHGPPG RADVPSVAAV VGSKCWPLIS RYRAAVRTQS PRLEMIDSLF QPIENTEKGD NGIMNELFVE FYRTSRARKP
701: KQIIIFRDGV SESQFEQVLK IEVDQIIKAY QRLGESDVPK FTVIVAQKNH HTKLFQAKGP ENVPAGTVVD TKIVHPTNYD FYMCAHAGKI GTSRPAHYHV
801: LLDEIGFSPD DLQNLIHSLS YVNQRSTTAT SIVAPVRYAH LAAAQVAQFT KFEGISEDGK VPELPRLHEN VEGNMFFC
101: DGEKTLYTVG PLPQNEFDFL VIVEGSFSKR DCGVSDGGSS SGTCKRSKRS FLPRSYKVQI HYAAEIPLKT VLGTQRGAYT PDKSAQDALR VLDIVLRQQA
201: AERGCLLVRQ AFFHSDGHPM KVGGGVIGIR GLHSSFRPTH GGLSLNIDVS TTMILEPGPV IEFLKANQSV ETPRQIDWIK AAKMLKHMRV KATHRNMEFK
301: IIGLSSKPCN QQLFSMKIKD GEREVPIREI TVYDYFKQTY TEPISSAYFP CLDVGKPDRP NYLPLEFCNL VSLQRYTKPL SGRQRVLLVE SSRQKPLERI
401: KTLNDAMHTY CYDKDPFLAG CGISIEKEMT QVEGRVLKPP MLKFGKNEDF QPCNGRWNFN NKMLLEPRAI KSWAIVNFSF PCDSSHISRE LISCGMRKGI
501: EIDRPFALVE EDPQYKKAGP VERVEKMIAT MKLKFPDPPH FILCILPERK TSDIYGPWKK ICLTEEGIHT QCICPIKISD QYLTNVLLKI NSKLGGINSL
601: LGIEYSYNIP LINKIPTLIL GMDVSHGPPG RADVPSVAAV VGSKCWPLIS RYRAAVRTQS PRLEMIDSLF QPIENTEKGD NGIMNELFVE FYRTSRARKP
701: KQIIIFRDGV SESQFEQVLK IEVDQIIKAY QRLGESDVPK FTVIVAQKNH HTKLFQAKGP ENVPAGTVVD TKIVHPTNYD FYMCAHAGKI GTSRPAHYHV
801: LLDEIGFSPD DLQNLIHSLS YVNQRSTTAT SIVAPVRYAH LAAAQVAQFT KFEGISEDGK VPELPRLHEN VEGNMFFC
Arabidopsis Description
AGO6Protein argonaute 6 [Source:UniProtKB/Swiss-Prot;Acc:O48771]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.