Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY04311 | Canola | cytosol, nucleus, plastid | 88.86 | 98.47 |
| Bra032254.1-P | Field mustard | nucleus | 99.91 | 97.66 |
| CDY41831 | Canola | nucleus | 89.69 | 93.3 |
| CDY68174 | Canola | nucleus | 90.15 | 93.06 |
| AT1G48410.2 | Thale cress | nucleus | 85.91 | 88.86 |
| Zm00001d044183_P001 | Maize | cytosol | 13.44 | 80.66 |
| Zm00001d037833_P001 | Maize | mitochondrion | 18.14 | 79.44 |
| VIT_19s0014g01840.t01 | Wine grape | cytosol, nucleus, plastid | 56.35 | 78.76 |
| Solyc03g098280.2.1 | Tomato | nucleus | 69.43 | 76.94 |
| Solyc06g072300.2.1 | Tomato | nucleus | 74.22 | 76.47 |
| PGSC0003DMT400069313 | Potato | cytosol | 74.03 | 76.28 |
| KRH38925 | Soybean | endoplasmic reticulum | 74.31 | 76.28 |
| KRH09472 | Soybean | nucleus | 73.48 | 75.78 |
| VIT_17s0053g00680.t01 | Wine grape | nucleus | 74.86 | 74.93 |
| GSMUA_AchrUn_... | Banana | cytosol | 13.44 | 74.49 |
| GSMUA_Achr3P13970_001 | Banana | nucleus | 72.01 | 73.77 |
| OQU82149 | Sorghum | nucleus | 71.82 | 72.42 |
| TraesCS7D01G552900.1 | Wheat | mitochondrion | 30.29 | 72.31 |
| TraesCSU01G081900.1 | Wheat | plastid | 64.46 | 71.57 |
| Os04t0566500-04 | Rice | nucleus | 72.38 | 71.39 |
| TraesCS2D01G400200.1 | Wheat | nucleus | 72.1 | 71.25 |
| TraesCS2B01G421000.2 | Wheat | nucleus | 72.19 | 71.14 |
| Os02t0672200-01 | Rice | cytosol | 70.81 | 71.07 |
| GSMUA_Achr1P17950_001 | Banana | nucleus | 68.97 | 71.0 |
| PGSC0003DMT400079716 | Potato | nucleus | 73.39 | 70.72 |
| TraesCS7D01G553200.1 | Wheat | nucleus, plastid | 30.94 | 70.15 |
| TraesCS2A01G403100.4 | Wheat | nucleus | 72.19 | 70.0 |
| GSMUA_Achr3P27070_001 | Banana | nucleus | 69.15 | 69.8 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 68.14 | 69.55 |
| EES18841 | Sorghum | nucleus | 70.81 | 69.34 |
| TraesCS6B01G466700.1 | Wheat | nucleus | 64.64 | 69.3 |
| Zm00001d002650_P003 | Maize | nucleus | 71.82 | 69.27 |
| Os02t0831600-01 | Rice | extracellular | 64.36 | 69.14 |
| GSMUA_Achr1P07120_001 | Banana | cytosol | 67.03 | 68.87 |
| Zm00001d011096_P059 | Maize | nucleus | 70.26 | 68.86 |
| Zm00001d026111_P014 | Maize | nucleus | 69.43 | 68.86 |
| CDY22332 | Canola | plastid | 60.5 | 67.38 |
| CDX94724 | Canola | plastid | 60.77 | 67.28 |
| Os06t0729300-01 | Rice | nucleus | 64.27 | 67.24 |
| TraesCS6D01G403900.1 | Wheat | plastid | 65.1 | 67.01 |
| Zm00001d025073_P001 | Maize | cytosol | 23.94 | 67.01 |
| KXG20965 | Sorghum | nucleus | 64.64 | 66.98 |
| TraesCS6A01G254600.2 | Wheat | plastid | 66.85 | 66.91 |
| TraesCS6B01G270900.1 | Wheat | nucleus | 66.67 | 66.73 |
| TraesCSU01G065300.1 | Wheat | nucleus | 73.2 | 66.69 |
| Zm00001d035747_P027 | Maize | endoplasmic reticulum, plastid | 69.52 | 65.71 |
| TraesCS7B01G482100.1 | Wheat | nucleus | 62.43 | 65.7 |
| TraesCS7A01G557400.1 | Wheat | plastid | 62.34 | 65.6 |
| TraesCS7D01G553000.1 | Wheat | cytosol | 62.25 | 65.57 |
| TraesCS7A01G040700.5 | Wheat | endoplasmic reticulum, golgi, vacuole | 72.93 | 65.45 |
| TraesCS6D01G235900.1 | Wheat | endoplasmic reticulum | 67.03 | 65.41 |
| Zm00001d025331_P002 | Maize | cytosol | 33.15 | 65.22 |
| TraesCS7D01G036100.3 | Wheat | endoplasmic reticulum, golgi | 72.47 | 65.04 |
| GSMUA_Achr7P04100_001 | Banana | extracellular | 14.46 | 63.31 |
| HORVU7Hr1G120600.3 | Barley | cytosol, nucleus | 61.97 | 63.25 |
| HORVU7Hr1G007000.14 | Barley | nucleus | 70.63 | 63.02 |
| OQU86027 | Sorghum | plastid | 62.71 | 61.68 |
| TraesCS3B01G027100.1 | Wheat | cytosol | 8.66 | 61.44 |
| Zm00001d014875_P001 | Maize | nucleus | 60.68 | 61.08 |
| TraesCS2A01G258200.1 | Wheat | cytosol | 36.19 | 59.01 |
| CDX71410 | Canola | nucleus | 48.99 | 55.88 |
| CDY04517 | Canola | plastid | 48.99 | 55.59 |
| TraesCS1D01G151300.3 | Wheat | plastid | 41.9 | 53.59 |
| TraesCS5B01G116900.5 | Wheat | cytosol, mitochondrion, nucleus, plastid | 41.8 | 53.47 |
| GSMUA_AchrUn_... | Banana | cytosol | 14.73 | 52.63 |
| TraesCS2A01G258100.1 | Wheat | mitochondrion | 42.36 | 52.51 |
| Os02t0169400-01 | Rice | nucleus | 41.53 | 51.48 |
| HORVU2Hr1G103840.1 | Barley | cytosol | 10.77 | 46.8 |
| CDY68123 | Canola | cytosol, endoplasmic reticulum, nucleus | 9.67 | 44.49 |
| CDY72062 | Canola | plastid | 12.06 | 44.11 |
| CDX92417 | Canola | nucleus | 21.36 | 36.02 |
| CDX84712 | Canola | nucleus | 28.73 | 35.99 |
| CDX79495 | Canola | nucleus | 28.45 | 35.64 |
| CDY09103 | Canola | nucleus | 28.82 | 34.55 |
| CDY51501 | Canola | nucleus | 28.55 | 34.48 |
| CDY16587 | Canola | nucleus | 27.9 | 34.35 |
| CDX92406 | Canola | nucleus | 28.36 | 34.07 |
| CDY48192 | Canola | nucleus | 28.64 | 33.73 |
| CDY59516 | Canola | nucleus | 28.08 | 33.66 |
| CDX77061 | Canola | nucleus | 28.55 | 33.62 |
| CDX92405 | Canola | nucleus | 28.27 | 33.55 |
| CDY28550 | Canola | cytosol, plastid | 30.11 | 33.5 |
| CDY56413 | Canola | nucleus | 28.45 | 33.48 |
| CDY07349 | Canola | nucleus | 30.29 | 33.44 |
| CDY04475 | Canola | nucleus | 28.36 | 33.37 |
| CDY70429 | Canola | plastid | 26.06 | 31.91 |
| CDY02373 | Canola | nucleus | 27.99 | 29.72 |
| CDY25885 | Canola | cytosol | 27.44 | 29.5 |
| CDY16595 | Canola | nucleus | 24.95 | 29.46 |
| CDY55876 | Canola | cytosol | 27.72 | 29.08 |
| CDY62055 | Canola | nucleus | 11.97 | 22.57 |
Protein Annotations
| MapMan:16.10.3 | Gene3D:2.170.260.10 | Gene3D:3.30.420.10 | Gene3D:3.40.50.2300 | GO:A0A078GGE5 | UniProt:A0A078GGE5 |
| InterPro:ArgoL1 | InterPro:ArgoL2 | InterPro:Argonaut_Gly-rich | InterPro:Argonaute_Mid_dom | InterPro:Argonaute_N | EnsemblPlants:CDY23683 |
| ProteinID:CDY23683 | ProteinID:CDY23683.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0031047 | EnsemblPlantsGene:GSBRNA2T00023953001 | InterPro:IPR003100 |
| InterPro:IPR003165 | InterPro:IPR036397 | InterPro:PAZ_dom | InterPro:PAZ_dom_sf | PFAM:PF02170 | PFAM:PF02171 |
| PFAM:PF08699 | PFAM:PF12764 | PFAM:PF16486 | PFAM:PF16487 | PFAM:PF16488 | PFscan:PS50821 |
| PFscan:PS50822 | PANTHER:PTHR22891 | PANTHER:PTHR22891:SF102 | InterPro:Piwi | InterPro:RNaseH-like_sf | InterPro:RNaseH_sf |
| SMART:SM00949 | SMART:SM00950 | SMART:SM01163 | SUPFAM:SSF101690 | SUPFAM:SSF53098 | UniParc:UPI0004EE6F25 |
| SEG:seg | : | : | : | : | : |
Description
BnaA05g17460DBnaA05g17460D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GGE5]
Coordinates
chrLK032146:-:528754..535493
Molecular Weight (calculated)
120332.0 Da
IEP (calculated)
9.622
GRAVY (calculated)
-0.627
Length
1086 amino acids
Sequence
(BLAST)
(BLAST)
0001: MVRKKRTDGP SEGGEGSGSR AAPASGGGRG GYQQGRGGGG GGQQQGGRGY SPQSQQGGRG GGRGYGQPQQ QQYGGPREGH PPQQQQQQQY GGPRGGQPPQ
0101: QQQYGGPRGG QPPQQQQYSG PRGGQPPSQQ QYGGSREGQP PQQQHQQYGG PRGGPPRGGG RGGASSAGLP QRQSVPELHQ ATLPTYQAVS SQPTPAEVSP
0201: TQMPDPPAPV QEFEQLSIEQ GAPSQAIQPI PSSSKACKFP LRPGKGQFGK RCIVKANHFF AELPDKDLHQ YDVTITPEVT SRGVNRAVMK QLVDLYRETH
0301: LGRRLPAYDG RKSLYTAGPL PFVSKEFRIL LQDEEEGAGG QRREREFKVV IKLAARADLH HLGLFLQGKQ ADAPQEALQV LDIVLRELPT SKERYTPVGR
0401: SFYSPDIGRK QSLGDGLESW RGFYQSIRPT QMGLSLNIDM SSTAFIEALP VTEFVCELLN RDIRSRPLSD ADRVKIKKAL RGVKVEVTHR GNMRRKYRIS
0501: GLTAVATREL TFPVDERNTQ KSVVEYFYET YGFRIQHTQL PCLQVGNSNR PNYLPMEVCK IVEGQRYSKR LNERQITALL KVTCQRPQER EKDILRTVGL
0601: NDYDHDPYAK EFGIKISASL ASVEARILPP PWLKYHDSGR EGTCLPQVGQ WNMMNKKMIN GGTVSNWICV NFSRQVPDNL ARTFCQELAQ MCHTSGMAFN
0701: PEPVLPPVSA RPEQVEKVLK TRYHDAMAKL SKGKEIDLLI VILPDNNGSL YGDLKRICET ELGIVSQCCL TKHVFKMSKQ NTVLVDALSR RIPLVSDRPT
0801: IIFGADVTHP HPGEDSSPSI AAVVASQDWP EITKYAGLVC AQAHRQELIQ DLFKEWKDPQ KGVVTGGMIK ELLIAFRRST GHKPLRIIFY RDGVSEGQFY
0901: QVLLYELDAI RKACASLEAG YQPPVTFVVV QKRHHTRLFA HNHNDRNSVD RSGNILPGTV VDSKICHPTE FDFYLCSHAG IQGTSRPAHY HVLWDENNFS
1001: ADGLQSLTNN LCYTYARCTR SVSIVPPAYY AHLAAFRARF YMEPETSDSG SMASGSMARG GGMGGRNTLR PLPPLKDNVK RVMFYC
0101: QQQYGGPRGG QPPQQQQYSG PRGGQPPSQQ QYGGSREGQP PQQQHQQYGG PRGGPPRGGG RGGASSAGLP QRQSVPELHQ ATLPTYQAVS SQPTPAEVSP
0201: TQMPDPPAPV QEFEQLSIEQ GAPSQAIQPI PSSSKACKFP LRPGKGQFGK RCIVKANHFF AELPDKDLHQ YDVTITPEVT SRGVNRAVMK QLVDLYRETH
0301: LGRRLPAYDG RKSLYTAGPL PFVSKEFRIL LQDEEEGAGG QRREREFKVV IKLAARADLH HLGLFLQGKQ ADAPQEALQV LDIVLRELPT SKERYTPVGR
0401: SFYSPDIGRK QSLGDGLESW RGFYQSIRPT QMGLSLNIDM SSTAFIEALP VTEFVCELLN RDIRSRPLSD ADRVKIKKAL RGVKVEVTHR GNMRRKYRIS
0501: GLTAVATREL TFPVDERNTQ KSVVEYFYET YGFRIQHTQL PCLQVGNSNR PNYLPMEVCK IVEGQRYSKR LNERQITALL KVTCQRPQER EKDILRTVGL
0601: NDYDHDPYAK EFGIKISASL ASVEARILPP PWLKYHDSGR EGTCLPQVGQ WNMMNKKMIN GGTVSNWICV NFSRQVPDNL ARTFCQELAQ MCHTSGMAFN
0701: PEPVLPPVSA RPEQVEKVLK TRYHDAMAKL SKGKEIDLLI VILPDNNGSL YGDLKRICET ELGIVSQCCL TKHVFKMSKQ NTVLVDALSR RIPLVSDRPT
0801: IIFGADVTHP HPGEDSSPSI AAVVASQDWP EITKYAGLVC AQAHRQELIQ DLFKEWKDPQ KGVVTGGMIK ELLIAFRRST GHKPLRIIFY RDGVSEGQFY
0901: QVLLYELDAI RKACASLEAG YQPPVTFVVV QKRHHTRLFA HNHNDRNSVD RSGNILPGTV VDSKICHPTE FDFYLCSHAG IQGTSRPAHY HVLWDENNFS
1001: ADGLQSLTNN LCYTYARCTR SVSIVPPAYY AHLAAFRARF YMEPETSDSG SMASGSMARG GGMGGRNTLR PLPPLKDNVK RVMFYC
0001: MVRKRRTDAP SEGGEGSGSR EAGPVSGGGR GSQRGGFQQG GGQHQGGRGY TPQPQQGGRG GRGYGQPPQQ QQQYGGPQEY QGRGRGGPPH QGGRGGYGGG
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRIRYIPVGR SFYSPDIGKK QSLGDGLESW RGFYQSIRPT QMGLSLNIDM SSTAFIEANP VIQFVCDLLN
0401: RDISSRPLSD ADRVKIKKAL RGVKVEVTHR GNMRRKYRIS GLTAVATREL TFPVDERNTQ KSVVEYFHET YGFRIQHTQL PCLQVGNSNR PNYLPMEVCK
0501: IVEGQRYSKR LNERQITALL KVTCQRPIDR EKDILQTVQL NDYAKDNYAQ EFGIKISTSL ASVEARILPP PWLKYHESGR EGTCLPQVGQ WNMMNKKMIN
0601: GGTVNNWICI NFSRQVQDNL ARTFCQELAQ MCYVSGMAFN PEPVLPPVSA RPEQVEKVLK TRYHDATSKL SQGKEIDLLI VILPDNNGSL YGDLKRICET
0701: ELGIVSQCCL TKHVFKMSKQ YMANVALKIN VKVGGRNTVL VDALSRRIPL VSDRPTIIFG ADVTHPHPGE DSSPSIAAVV ASQDWPEITK YAGLVCAQAH
0801: RQELIQDLFK EWKDPQKGVV TGGMIKELLI AFRRSTGHKP LRIIFYRDGV SEGQFYQVLL YELDAIRKAC ASLEAGYQPP VTFVVVQKRH HTRLFAQNHN
0901: DRHSVDRSGN ILPGTVVDSK ICHPTEFDFY LCSHAGIQGT SRPAHYHVLW DENNFTADGL QSLTNNLCYT YARCTRSVSI VPPAYYAHLA AFRARFYMEP
1001: ETSDSGSMAS GSMARGGGMA GRSTRGPNVN AAVRPLPALK ENVKRVMFYC
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRIRYIPVGR SFYSPDIGKK QSLGDGLESW RGFYQSIRPT QMGLSLNIDM SSTAFIEANP VIQFVCDLLN
0401: RDISSRPLSD ADRVKIKKAL RGVKVEVTHR GNMRRKYRIS GLTAVATREL TFPVDERNTQ KSVVEYFHET YGFRIQHTQL PCLQVGNSNR PNYLPMEVCK
0501: IVEGQRYSKR LNERQITALL KVTCQRPIDR EKDILQTVQL NDYAKDNYAQ EFGIKISTSL ASVEARILPP PWLKYHESGR EGTCLPQVGQ WNMMNKKMIN
0601: GGTVNNWICI NFSRQVQDNL ARTFCQELAQ MCYVSGMAFN PEPVLPPVSA RPEQVEKVLK TRYHDATSKL SQGKEIDLLI VILPDNNGSL YGDLKRICET
0701: ELGIVSQCCL TKHVFKMSKQ YMANVALKIN VKVGGRNTVL VDALSRRIPL VSDRPTIIFG ADVTHPHPGE DSSPSIAAVV ASQDWPEITK YAGLVCAQAH
0801: RQELIQDLFK EWKDPQKGVV TGGMIKELLI AFRRSTGHKP LRIIFYRDGV SEGQFYQVLL YELDAIRKAC ASLEAGYQPP VTFVVVQKRH HTRLFAQNHN
0901: DRHSVDRSGN ILPGTVVDSK ICHPTEFDFY LCSHAGIQGT SRPAHYHVLW DENNFTADGL QSLTNNLCYT YARCTRSVSI VPPAYYAHLA AFRARFYMEP
1001: ETSDSGSMAS GSMARGGGMA GRSTRGPNVN AAVRPLPALK ENVKRVMFYC
Arabidopsis Description
AGO1ICU9 [Source:UniProtKB/TrEMBL;Acc:A0A178WL72]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.