Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G036100.3 | Wheat | endoplasmic reticulum, golgi | 97.9 | 96.45 |
| TraesCS7A01G040700.5 | Wheat | endoplasmic reticulum, golgi, vacuole | 97.57 | 96.12 |
| HORVU7Hr1G007000.14 | Barley | nucleus | 94.04 | 92.11 |
| Zm00001d044183_P001 | Maize | cytosol | 13.84 | 91.16 |
| Zm00001d037833_P001 | Maize | mitochondrion | 18.71 | 89.92 |
| OQU82149 | Sorghum | nucleus | 80.96 | 89.6 |
| Os04t0566500-04 | Rice | nucleus | 82.63 | 89.46 |
| KRG99173 | Soybean | cytosol | 11.58 | 88.46 |
| Zm00001d026111_P014 | Maize | nucleus | 78.27 | 85.21 |
| Zm00001d002650_P003 | Maize | nucleus | 80.29 | 84.99 |
| EES18841 | Sorghum | nucleus | 78.86 | 84.76 |
| Zm00001d011096_P059 | Maize | nucleus | 77.43 | 83.3 |
| Zm00001d035747_P027 | Maize | endoplasmic reticulum, plastid | 77.94 | 80.85 |
| VIT_19s0014g01840.t01 | Wine grape | cytosol, nucleus, plastid | 52.52 | 80.57 |
| Solyc06g072300.2.1 | Tomato | nucleus | 69.55 | 78.65 |
| PGSC0003DMT400069313 | Potato | cytosol | 69.46 | 78.56 |
| Solyc03g098280.2.1 | Tomato | nucleus | 64.18 | 78.06 |
| CDY04311 | Canola | cytosol, nucleus, plastid | 63.51 | 77.24 |
| CDY41831 | Canola | nucleus | 67.03 | 76.53 |
| CDY68174 | Canola | nucleus | 67.45 | 76.43 |
| AT1G48410.2 | Thale cress | nucleus | 67.28 | 76.38 |
| VIT_17s0053g00680.t01 | Wine grape | nucleus | 69.3 | 76.13 |
| Bra014136.1-P | Field mustard | nucleus | 67.7 | 74.79 |
| TraesCSU01G081900.1 | Wheat | plastid | 60.82 | 74.13 |
| Bra032254.1-P | Field mustard | nucleus | 68.29 | 73.27 |
| CDY23683 | Canola | cytosol, nucleus, plastid | 66.69 | 73.2 |
| Zm00001d025331_P002 | Maize | cytosol | 33.72 | 72.83 |
| PGSC0003DMT400079716 | Potato | nucleus | 68.37 | 72.32 |
| GSMUA_Achr7P04100_001 | Banana | extracellular | 14.93 | 71.77 |
| Zm00001d025073_P001 | Maize | cytosol | 23.24 | 71.39 |
Protein Annotations
| MapMan:16.10.3 | Gene3D:2.170.260.10 | Gene3D:3.30.420.10 | Gene3D:3.40.50.2300 | InterPro:ArgoL1 | InterPro:ArgoL2 |
| InterPro:Argonaut_Gly-rich | InterPro:Argonaute_Mid_dom | InterPro:Argonaute_N | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:IPR003100 | InterPro:IPR003165 | InterPro:IPR036397 | InterPro:PAZ_dom | InterPro:PAZ_dom_sf |
| PFAM:PF02170 | PFAM:PF02171 | PFAM:PF08699 | PFAM:PF12764 | PFAM:PF16486 | PFAM:PF16487 |
| PFAM:PF16488 | PFscan:PS50821 | PFscan:PS50822 | PANTHER:PTHR22891 | PANTHER:PTHR22891:SF102 | InterPro:Piwi |
| InterPro:RNaseH-like_sf | InterPro:RNaseH_sf | SMART:SM00949 | SMART:SM00950 | SMART:SM01163 | SUPFAM:SSF101690 |
| SUPFAM:SSF53098 | EnsemblPlantsGene:TraesCSU01G065300 | EnsemblPlants:TraesCSU01G065300.1 | TIGR:cd02846 | TIGR:cd04657 | SEG:seg |
Description
No Description!
Coordinates
chrUn:-:50835910..50842226
Molecular Weight (calculated)
131454.0 Da
IEP (calculated)
9.765
GRAVY (calculated)
-0.664
Length
1192 amino acids
Sequence
(BLAST)
(BLAST)
0001: MVRKKRTGTG ESSGEASGAP GQGSSQPAER APPQQHQQHG GGRGWVPQQG GRGGGQYLGR GGQYQGQGGP AAHRPGGPPE YQQREYQGRG HPGGGPPEYQ
0101: PRDYQGRGHP GGGPPEYQPR DPQGRGHPGG APPEYQPRGP QGRGHPGGAP PEYQPRGPQG RGHPGGASPE YQPRGPQGRG HPGGGPPEYQ PRDPQGRGHP
0201: GGGPPEYQQR DYQGRGGPRP RGGGMPQPSY GGHMGGRGGH NVPPGQSRTV PELHQAPDVQ YQAPVVSPSA SGAGSSSQPA AEVSSGQVEQ QFQKLDISDQ
0301: SSTSQAIQPA PASSKSVRFP LRPGMGKCGD RCVVKANHFF AELPDKDLHQ YDVTITPEVT SRGVNRAVIA ELVKLYRQSH MNGRLPAYDG RKSLYTAGPL
0401: PFTSRTFEIA LQDEDEGLVG GQATPRRERQ FRVVIKYAAR ADLHHLAMFL AGRQPDAPQE ALQVLDIVLR ELPTARYSPV SRSFYSPNLG RRQRLGDGLE
0501: SWRGFYQSIR PTQMGLSLNI DMSSTAFIEP LPVIEFVAQL LCRDISVRPL TDSDRVKIKK ALRGVKVEVT HRGNMRRKYR ISGLTSQATR ELSFPVDDRG
0601: TVKTVVQYFL ETYGFNIQHT TLPCLQVGNQ QRPNYLPMEV CKIVEGQRYS KRLNEKQITA LLKVTCQRPQ EREKDILQTV HHNAYYEDPY AQEFGIKIDE
0701: QLASVEARVL PPPRLKYHDS GREKDVLPRV GQWNMMNKKM VNGGRVSHWA CINFSRNVQD NAAKVFCHEL AIMCQISGMN FAPEPVLPVL SARPEHVERA
0801: LKARYHDAMN ASKPPGKELD LLIVILPDNN GSLYGDLKRI CETELGLVSQ CCLTKHVFKM SKQYLANVAL KINVKVGGRN TVLVDALARR IRLVTDRPTI
0901: IFGADVTHPH PGEDSSPSIA AVVASQDWPE ITKYAGLVSA QAHRQELIQD LFKVWQDPQR GTVTGGMIKE LLISFKRATG QKPQRIIFYR DGVSEGQFYQ
1001: VLLFELDAIR KACASLEPNY QPPVTFVVVQ KRHHTRLFAN NHNDQRTVDR SGNILPGTVV DSKICHPTEF DFYLCSHAGI QGTSRPAHYH VLWDENKFTA
1101: DELQTLTNNL CYTYARCTRS VSIVPPAYYA HLAAFRARFY MEPDTSDSGS VASGARGGPP QGGPRSSTRF GNVAVRPLPA LKENVKRVMF YC
0101: PRDYQGRGHP GGGPPEYQPR DPQGRGHPGG APPEYQPRGP QGRGHPGGAP PEYQPRGPQG RGHPGGASPE YQPRGPQGRG HPGGGPPEYQ PRDPQGRGHP
0201: GGGPPEYQQR DYQGRGGPRP RGGGMPQPSY GGHMGGRGGH NVPPGQSRTV PELHQAPDVQ YQAPVVSPSA SGAGSSSQPA AEVSSGQVEQ QFQKLDISDQ
0301: SSTSQAIQPA PASSKSVRFP LRPGMGKCGD RCVVKANHFF AELPDKDLHQ YDVTITPEVT SRGVNRAVIA ELVKLYRQSH MNGRLPAYDG RKSLYTAGPL
0401: PFTSRTFEIA LQDEDEGLVG GQATPRRERQ FRVVIKYAAR ADLHHLAMFL AGRQPDAPQE ALQVLDIVLR ELPTARYSPV SRSFYSPNLG RRQRLGDGLE
0501: SWRGFYQSIR PTQMGLSLNI DMSSTAFIEP LPVIEFVAQL LCRDISVRPL TDSDRVKIKK ALRGVKVEVT HRGNMRRKYR ISGLTSQATR ELSFPVDDRG
0601: TVKTVVQYFL ETYGFNIQHT TLPCLQVGNQ QRPNYLPMEV CKIVEGQRYS KRLNEKQITA LLKVTCQRPQ EREKDILQTV HHNAYYEDPY AQEFGIKIDE
0701: QLASVEARVL PPPRLKYHDS GREKDVLPRV GQWNMMNKKM VNGGRVSHWA CINFSRNVQD NAAKVFCHEL AIMCQISGMN FAPEPVLPVL SARPEHVERA
0801: LKARYHDAMN ASKPPGKELD LLIVILPDNN GSLYGDLKRI CETELGLVSQ CCLTKHVFKM SKQYLANVAL KINVKVGGRN TVLVDALARR IRLVTDRPTI
0901: IFGADVTHPH PGEDSSPSIA AVVASQDWPE ITKYAGLVSA QAHRQELIQD LFKVWQDPQR GTVTGGMIKE LLISFKRATG QKPQRIIFYR DGVSEGQFYQ
1001: VLLFELDAIR KACASLEPNY QPPVTFVVVQ KRHHTRLFAN NHNDQRTVDR SGNILPGTVV DSKICHPTEF DFYLCSHAGI QGTSRPAHYH VLWDENKFTA
1101: DELQTLTNNL CYTYARCTRS VSIVPPAYYA HLAAFRARFY MEPDTSDSGS VASGARGGPP QGGPRSSTRF GNVAVRPLPA LKENVKRVMF YC
0001: MVRKRRTDAP SEGGEGSGSR EAGPVSGGGR GSQRGGFQQG GGQHQGGRGY TPQPQQGGRG GRGYGQPPQQ QQQYGGPQEY QGRGRGGPPH QGGRGGYGGG
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC
Arabidopsis Description
AGO1ICU9 [Source:UniProtKB/TrEMBL;Acc:A0A178WL72]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.