Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- cytosol 1
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plastid:
22160430
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G466700.1 | Wheat | nucleus | 96.93 | 93.58 |
| TraesCS6D01G403900.1 | Wheat | plastid | 97.44 | 90.33 |
| Os02t0831600-01 | Rice | extracellular | 84.97 | 82.2 |
| VIT_19s0014g01840.t01 | Wine grape | cytosol, nucleus, plastid | 60.12 | 75.68 |
| Solyc03g098280.2.1 | Tomato | nucleus | 71.98 | 71.84 |
| CDY04311 | Canola | cytosol, nucleus, plastid | 71.06 | 70.92 |
| OQU86027 | Sorghum | plastid | 78.73 | 69.75 |
| PGSC0003DMT400069313 | Potato | cytosol | 75.05 | 69.64 |
| Solyc06g072300.2.1 | Tomato | nucleus | 75.05 | 69.64 |
| AT1G48410.2 | Thale cress | nucleus | 72.9 | 67.9 |
| CDY68174 | Canola | nucleus | 72.7 | 67.59 |
| CDY41831 | Canola | nucleus | 72.09 | 67.53 |
| VIT_17s0053g00680.t01 | Wine grape | nucleus | 74.44 | 67.1 |
| Bra014136.1-P | Field mustard | nucleus | 72.9 | 66.08 |
| Bra032254.1-P | Field mustard | nucleus | 73.31 | 64.54 |
| CDY23683 | Canola | cytosol, nucleus, plastid | 71.57 | 64.46 |
| PGSC0003DMT400079716 | Potato | nucleus | 73.82 | 64.06 |
| TraesCSU01G065300.1 | Wheat | nucleus | 74.13 | 60.82 |
Protein Annotations
| MapMan:16.10.3 | Gene3D:2.170.260.10 | Gene3D:3.30.420.10 | Gene3D:3.40.50.2300 | InterPro:ArgoL1 | InterPro:ArgoL2 |
| InterPro:Argonaute_Mid_dom | InterPro:Argonaute_N | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR003100 | InterPro:IPR003165 | InterPro:IPR036397 | InterPro:PAZ_dom | InterPro:PAZ_dom_sf | PFAM:PF02170 |
| PFAM:PF02171 | PFAM:PF08699 | PFAM:PF16486 | PFAM:PF16487 | PFAM:PF16488 | PFscan:PS50821 |
| PFscan:PS50822 | PANTHER:PTHR22891 | PANTHER:PTHR22891:SF34 | InterPro:Piwi | InterPro:RNaseH-like_sf | InterPro:RNaseH_sf |
| SMART:SM00949 | SMART:SM00950 | SMART:SM01163 | SUPFAM:SSF101690 | SUPFAM:SSF53098 | EnsemblPlantsGene:TraesCSU01G081900 |
| EnsemblPlants:TraesCSU01G081900.1 | TIGR:cd02846 | TIGR:cd04657 | SEG:seg | : | : |
Description
No Description!
Coordinates
chrUn:+:74811000..74816837
Molecular Weight (calculated)
108498.0 Da
IEP (calculated)
9.778
GRAVY (calculated)
-0.446
Length
978 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSRRGRPQQ QYPPPAAAAE GPRPGGPFPL QQQPQGGGRG APPQQPRHDA AAGRGRGRAA RGAGPSSAPA AGPLGRLAPE LRQAMEETSP TQAEAAIPAS
101: SKAIRFPLRP GKGSAGTRCL VKANHFIAQL PDKDLHHYDV SITPEVTSRV VNRAVINELV SLHRAAYLGG RLPAYDGRKS LYTAGPLPFT SKEFQITLLD
201: DDDGSGAQRR QRNFKVVIKF AARADLHRLG MFLAGRHAEA PQEALQVLDI VLRELPSARY APFGRSFFSP DLGRRQPLGD GLESWRGFYQ SIRPTQMGLS
301: LNIDMSATAF IEPLPVIDYA AQLLRSDIHS RPLSDAERVK IKKALRGVKV EVTHRGNMRR KYRISGLTTQ ATRELTFPVD EGGTVKSVVQ YFQETYGFAI
401: QHTYLPCLQV GNQQRPNYLP MEVCKIVEGQ RYSKRLNQNQ IRALLDETCQ YPRDRERDIT QMVKHNAYQE DPYAKEFGIK ISDCLASVDA RILPAPRLKY
501: NETGREKDCI PRVGQWNMMN KKMVNGGKVR SWMCVNFARN VPDKLARDFC HQLAQMCQDS GMDFALEPVL PPMSARPDQV ERALKARYHE AMNILGPQRR
601: ELDLLIGILP DNNGSLYGDL KRVCEIDLGI VSQCCCTKQV FKLNKQIYAN IALKINVKVG GRNTVLVDAL SRRIPLVTDR PTIIFGADVT HPHPGEDSSP
701: SIAAVVASQD WPEVTRYAGL VSAQAHRQEL IEDLYKVRQD PQKGPVSSGM IRELLISFKK STGEKPQRII FYRDGVSEGQ FYQVLLFELN AIRKACASLE
801: ANYQPQVTFI VVQKRHHTRL FAHNHNDKNS MDRSGNILPG TVVDTKICHP TEFDFYLCSH AGIKGTSRPA HYHVLWDENN FTADGLQTLT NNLCYTYARC
901: TRSVSIVPPA YYAHLAAFRA RFYMEPESSD SGSMASGPGG RGPTSGSSAS HGTRAPGGAA VKPLPALKDN VKNVMFYC
101: SKAIRFPLRP GKGSAGTRCL VKANHFIAQL PDKDLHHYDV SITPEVTSRV VNRAVINELV SLHRAAYLGG RLPAYDGRKS LYTAGPLPFT SKEFQITLLD
201: DDDGSGAQRR QRNFKVVIKF AARADLHRLG MFLAGRHAEA PQEALQVLDI VLRELPSARY APFGRSFFSP DLGRRQPLGD GLESWRGFYQ SIRPTQMGLS
301: LNIDMSATAF IEPLPVIDYA AQLLRSDIHS RPLSDAERVK IKKALRGVKV EVTHRGNMRR KYRISGLTTQ ATRELTFPVD EGGTVKSVVQ YFQETYGFAI
401: QHTYLPCLQV GNQQRPNYLP MEVCKIVEGQ RYSKRLNQNQ IRALLDETCQ YPRDRERDIT QMVKHNAYQE DPYAKEFGIK ISDCLASVDA RILPAPRLKY
501: NETGREKDCI PRVGQWNMMN KKMVNGGKVR SWMCVNFARN VPDKLARDFC HQLAQMCQDS GMDFALEPVL PPMSARPDQV ERALKARYHE AMNILGPQRR
601: ELDLLIGILP DNNGSLYGDL KRVCEIDLGI VSQCCCTKQV FKLNKQIYAN IALKINVKVG GRNTVLVDAL SRRIPLVTDR PTIIFGADVT HPHPGEDSSP
701: SIAAVVASQD WPEVTRYAGL VSAQAHRQEL IEDLYKVRQD PQKGPVSSGM IRELLISFKK STGEKPQRII FYRDGVSEGQ FYQVLLFELN AIRKACASLE
801: ANYQPQVTFI VVQKRHHTRL FAHNHNDKNS MDRSGNILPG TVVDTKICHP TEFDFYLCSH AGIKGTSRPA HYHVLWDENN FTADGLQTLT NNLCYTYARC
901: TRSVSIVPPA YYAHLAAFRA RFYMEPESSD SGSMASGPGG RGPTSGSSAS HGTRAPGGAA VKPLPALKDN VKNVMFYC
0001: MVRKRRTDAP SEGGEGSGSR EAGPVSGGGR GSQRGGFQQG GGQHQGGRGY TPQPQQGGRG GRGYGQPPQQ QQQYGGPQEY QGRGRGGPPH QGGRGGYGGG
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC
Arabidopsis Description
AGO1ICU9 [Source:UniProtKB/TrEMBL;Acc:A0A178WL72]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.