Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY68174 | Canola | nucleus | 95.51 | 88.97 |
| CDY23683 | Canola | cytosol, nucleus, plastid | 98.47 | 88.86 |
| CDY41831 | Canola | nucleus | 94.59 | 88.79 |
| Bra032254.1-P | Field mustard | nucleus | 99.49 | 87.76 |
| AT1G48410.2 | Thale cress | nucleus | 91.53 | 85.43 |
| Zm00001d044183_P001 | Maize | cytosol | 14.9 | 80.66 |
| Zm00001d037833_P001 | Maize | mitochondrion | 20.1 | 79.44 |
| VIT_19s0014g01840.t01 | Wine grape | cytosol, nucleus, plastid | 62.45 | 78.76 |
| Solyc03g098280.2.1 | Tomato | nucleus | 77.14 | 77.14 |
| Solyc06g072300.2.1 | Tomato | nucleus | 80.41 | 74.76 |
| PGSC0003DMT400069313 | Potato | cytosol | 80.31 | 74.67 |
| GSMUA_AchrUn_... | Banana | cytosol | 14.9 | 74.49 |
| KRH38925 | Soybean | endoplasmic reticulum | 80.2 | 74.29 |
| KRH09472 | Soybean | nucleus | 79.59 | 74.07 |
| VIT_17s0053g00680.t01 | Wine grape | nucleus | 80.71 | 72.9 |
| TraesCS7D01G552900.1 | Wheat | mitochondrion | 33.67 | 72.53 |
| GSMUA_Achr3P13970_001 | Banana | nucleus | 77.65 | 71.79 |
| TraesCSU01G081900.1 | Wheat | plastid | 70.92 | 71.06 |
| TraesCS7D01G553200.1 | Wheat | nucleus, plastid | 34.49 | 70.56 |
| OQU82149 | Sorghum | nucleus | 77.14 | 70.19 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 75.71 | 69.74 |
| GSMUA_Achr1P17950_001 | Banana | nucleus | 75.0 | 69.67 |
| Os04t0566500-04 | Rice | nucleus | 77.65 | 69.12 |
| PGSC0003DMT400079716 | Potato | nucleus | 79.39 | 69.03 |
| Os02t0672200-01 | Rice | cytosol | 75.92 | 68.76 |
| TraesCS6B01G466700.1 | Wheat | nucleus | 70.92 | 68.61 |
| GSMUA_Achr3P27070_001 | Banana | nucleus | 75.2 | 68.49 |
| TraesCS2D01G400200.1 | Wheat | nucleus | 76.73 | 68.43 |
| Os02t0831600-01 | Rice | extracellular | 70.41 | 68.25 |
| TraesCS2B01G421000.2 | Wheat | nucleus | 76.73 | 68.24 |
| GSMUA_Achr1P07120_001 | Banana | cytosol | 72.45 | 67.17 |
| CDY22332 | Canola | plastid | 66.73 | 67.08 |
| TraesCS2A01G403100.4 | Wheat | nucleus | 76.63 | 67.05 |
| Zm00001d002650_P003 | Maize | nucleus | 77.04 | 67.05 |
| Zm00001d025073_P001 | Maize | cytosol | 26.53 | 67.01 |
| CDX94724 | Canola | plastid | 67.04 | 66.97 |
| Zm00001d026111_P014 | Maize | nucleus | 74.69 | 66.85 |
| Os06t0729300-01 | Rice | nucleus | 70.51 | 66.57 |
| TraesCS6D01G403900.1 | Wheat | plastid | 71.43 | 66.35 |
| EES18841 | Sorghum | nucleus | 74.59 | 65.92 |
| Zm00001d025331_P002 | Maize | cytosol | 36.94 | 65.58 |
| KXG20965 | Sorghum | nucleus | 70.1 | 65.55 |
| Zm00001d011096_P059 | Maize | nucleus | 73.88 | 65.34 |
| TraesCS6A01G254600.2 | Wheat | plastid | 72.14 | 65.16 |
| TraesCS6B01G270900.1 | Wheat | nucleus | 72.04 | 65.07 |
| TraesCS7B01G482100.1 | Wheat | nucleus | 67.96 | 64.53 |
| TraesCS7A01G557400.1 | Wheat | plastid | 67.96 | 64.53 |
| TraesCS7D01G553000.1 | Wheat | cytosol | 67.86 | 64.5 |
| TraesCS6D01G235900.1 | Wheat | endoplasmic reticulum | 72.45 | 63.79 |
| TraesCSU01G065300.1 | Wheat | nucleus | 77.24 | 63.51 |
| GSMUA_Achr7P04100_001 | Banana | extracellular | 16.02 | 63.31 |
| Zm00001d035747_P027 | Maize | endoplasmic reticulum, plastid | 73.88 | 63.01 |
| TraesCS7A01G040700.5 | Wheat | endoplasmic reticulum, golgi, vacuole | 77.24 | 62.56 |
| TraesCS7D01G036100.3 | Wheat | endoplasmic reticulum, golgi | 77.14 | 62.48 |
| HORVU7Hr1G120600.3 | Barley | cytosol, nucleus | 67.76 | 62.41 |
| TraesCS3B01G027100.1 | Wheat | cytosol | 9.69 | 62.09 |
| OQU86027 | Sorghum | plastid | 68.47 | 60.78 |
| Zm00001d014875_P001 | Maize | nucleus | 65.92 | 59.87 |
| HORVU7Hr1G007000.14 | Barley | nucleus | 74.08 | 59.65 |
| TraesCS2A01G258200.1 | Wheat | cytosol | 40.0 | 58.86 |
| CDX71410 | Canola | nucleus | 53.47 | 55.04 |
| CDY04517 | Canola | plastid | 53.57 | 54.86 |
| TraesCS1D01G151300.3 | Wheat | plastid | 45.82 | 52.89 |
| TraesCS5B01G116900.5 | Wheat | cytosol, mitochondrion, nucleus, plastid | 45.71 | 52.77 |
| GSMUA_AchrUn_... | Banana | cytosol | 16.33 | 52.63 |
| TraesCS2A01G258100.1 | Wheat | mitochondrion | 46.63 | 52.17 |
| Os02t0169400-01 | Rice | nucleus | 45.92 | 51.37 |
| HORVU2Hr1G103840.1 | Barley | cytosol | 11.84 | 46.4 |
| CDY68123 | Canola | cytosol, endoplasmic reticulum, nucleus | 10.82 | 44.92 |
| CDY72062 | Canola | plastid | 13.47 | 44.44 |
| CDX92417 | Canola | nucleus | 23.78 | 36.18 |
| CDX84712 | Canola | nucleus | 31.94 | 36.1 |
| CDX79495 | Canola | nucleus | 31.63 | 35.76 |
| CDY16587 | Canola | nucleus | 31.02 | 34.47 |
| CDY09103 | Canola | nucleus | 31.84 | 34.44 |
| CDY51501 | Canola | nucleus | 31.43 | 34.26 |
| CDX92406 | Canola | nucleus | 31.43 | 34.07 |
| CDY59516 | Canola | nucleus | 31.22 | 33.77 |
| CDY48192 | Canola | nucleus | 31.73 | 33.73 |
| CDX77061 | Canola | nucleus | 31.63 | 33.62 |
| CDX92405 | Canola | nucleus | 31.33 | 33.55 |
| CDY56413 | Canola | nucleus | 31.53 | 33.48 |
| CDY04475 | Canola | nucleus | 31.43 | 33.37 |
| CDY07349 | Canola | nucleus | 33.47 | 33.33 |
| CDY28550 | Canola | cytosol, plastid | 33.16 | 33.3 |
| CDY70429 | Canola | plastid | 28.88 | 31.91 |
| CDY16595 | Canola | nucleus | 27.55 | 29.35 |
| CDY02373 | Canola | nucleus | 29.8 | 28.54 |
| CDY25885 | Canola | cytosol | 28.98 | 28.12 |
| CDY55876 | Canola | cytosol | 29.18 | 27.63 |
| CDY62055 | Canola | nucleus | 13.27 | 22.57 |
Protein Annotations
| MapMan:16.10.3 | Gene3D:2.170.260.10 | Gene3D:3.30.420.10 | Gene3D:3.40.50.2300 | GO:A0A078ESU9 | InterPro:ArgoL1 |
| InterPro:ArgoL2 | InterPro:Argonaut_Gly-rich | InterPro:Argonaute_Mid_dom | InterPro:Argonaute_N | EnsemblPlants:CDY04311 | ProteinID:CDY04311 |
| ProteinID:CDY04311.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00118115001 |
| InterPro:IPR003100 | InterPro:IPR003165 | InterPro:IPR036397 | InterPro:PAZ_dom | InterPro:PAZ_dom_sf | PFAM:PF02170 |
| PFAM:PF02171 | PFAM:PF08699 | PFAM:PF12764 | PFAM:PF16486 | PFAM:PF16487 | PFAM:PF16488 |
| PFscan:PS50821 | PFscan:PS50822 | PANTHER:PTHR22891 | PANTHER:PTHR22891:SF102 | InterPro:Piwi | InterPro:RNaseH-like_sf |
| InterPro:RNaseH_sf | SMART:SM00949 | SMART:SM00950 | SMART:SM01163 | SUPFAM:SSF101690 | SUPFAM:SSF53098 |
| UniParc:UPI0004EDF35F | SEG:seg | : | : | : | : |
Description
BnaC05g25730D
Coordinates
chrLK031951:-:404264..410173
Molecular Weight (calculated)
109158.0 Da
IEP (calculated)
9.283
GRAVY (calculated)
-0.466
Length
980 amino acids
Sequence
(BLAST)
(BLAST)
001: MVRKKRTDGP SEGGEASGSR DAAPASGGGY QQGRGGGGGA GQQQGGRGYS PQSQPGGGRV PELHQATLPT YQAVSSQPTP AEVSPTQMPD PPAPVQEFEQ
101: LSIEQGAPSQ AIQPIPSSSK ACKFPLRPGK GQFGKRCIVK ANHFFAELPD KDLHQYDVTI TPEVTSRGVN RAVMKQLVDL YRETHLGRRL PAYDGRKSLY
201: TAGPLPFVSK EFRILLQDEE EGAGGQRRER EFKVVIKLAA RADLHHLGLF LQGKQADAPQ EALQVLDIVL RELPTSKERY TPVGRSFYSP DIGRKQSLGD
301: GLESWRGFYQ SIRPTQMGLS LNIDMSSTAF IEALPVTEFV CELLNRDIRS RPLSDADRVK IKKALRGVKV EVTHRGNMRR KYRISGLTAV ATRELTFPVD
401: ERNTQKSVVE YFYETYGFRI QHTQLPCLQV GNSNRPNYLP MEVCKIVEGQ RYSKRLNERQ ITALLKVTCQ RPQEREKDIL RTVGLNDYDH DPYAKEFGIK
501: ISASLASVEA RILPPPWLKY HDSGREGTCL PQVGQWNMMN KKMINGGTVS NWICVNFSRQ VPDNLARTFC QELAQMCHTS GMAFNPEPVL PPVSARPEQV
601: EKVLKTRYHD AMAKLSKGKE IDLLFVILPD NNGSLYGDLK RICETELGIV SQCCLTKHVF KMSKQNTVLV DALSRRIPLV SDRPTIIFGA DVTHPHPGED
701: SSPSIAAVVA SQDWPEITKY AGLVCAQAHR QELIQDLFKE WKDPQKGVMT GGMIKELLIA FRRSTGHKPL RIIFYRDGVS EGQFYQVLLY ELDAIRKACA
801: SLEAGYQPPV TFVVVQKRHH TRLFAHNHND RNSVDRSGNI LPGTVVDSKI CHPTEFDFYL CSHAGIQGTS RPAHYHVLWD ENNFSADGLQ SLTNNLCYTY
901: ARCTRSVSIV PPAYYAHLAA FRARFYMEPE TSDSGSMASG SMARGGGMGG RNTRGGPHVN AAVRPLPPLK DNVKRVMFYC
101: LSIEQGAPSQ AIQPIPSSSK ACKFPLRPGK GQFGKRCIVK ANHFFAELPD KDLHQYDVTI TPEVTSRGVN RAVMKQLVDL YRETHLGRRL PAYDGRKSLY
201: TAGPLPFVSK EFRILLQDEE EGAGGQRRER EFKVVIKLAA RADLHHLGLF LQGKQADAPQ EALQVLDIVL RELPTSKERY TPVGRSFYSP DIGRKQSLGD
301: GLESWRGFYQ SIRPTQMGLS LNIDMSSTAF IEALPVTEFV CELLNRDIRS RPLSDADRVK IKKALRGVKV EVTHRGNMRR KYRISGLTAV ATRELTFPVD
401: ERNTQKSVVE YFYETYGFRI QHTQLPCLQV GNSNRPNYLP MEVCKIVEGQ RYSKRLNERQ ITALLKVTCQ RPQEREKDIL RTVGLNDYDH DPYAKEFGIK
501: ISASLASVEA RILPPPWLKY HDSGREGTCL PQVGQWNMMN KKMINGGTVS NWICVNFSRQ VPDNLARTFC QELAQMCHTS GMAFNPEPVL PPVSARPEQV
601: EKVLKTRYHD AMAKLSKGKE IDLLFVILPD NNGSLYGDLK RICETELGIV SQCCLTKHVF KMSKQNTVLV DALSRRIPLV SDRPTIIFGA DVTHPHPGED
701: SSPSIAAVVA SQDWPEITKY AGLVCAQAHR QELIQDLFKE WKDPQKGVMT GGMIKELLIA FRRSTGHKPL RIIFYRDGVS EGQFYQVLLY ELDAIRKACA
801: SLEAGYQPPV TFVVVQKRHH TRLFAHNHND RNSVDRSGNI LPGTVVDSKI CHPTEFDFYL CSHAGIQGTS RPAHYHVLWD ENNFSADGLQ SLTNNLCYTY
901: ARCTRSVSIV PPAYYAHLAA FRARFYMEPE TSDSGSMASG SMARGGGMGG RNTRGGPHVN AAVRPLPPLK DNVKRVMFYC
0001: MVRKRRTDAP SEGGEGSGSR EAGPVSGGGR GSQRGGFQQG GGQHQGGRGY TPQPQQGGRG GRGYGQPPQQ QQQYGGPQEY QGRGRGGPPH QGGRGGYGGG
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRIRYIPVGR SFYSPDIGKK QSLGDGLESW RGFYQSIRPT QMGLSLNIDM SSTAFIEANP VIQFVCDLLN
0401: RDISSRPLSD ADRVKIKKAL RGVKVEVTHR GNMRRKYRIS GLTAVATREL TFPVDERNTQ KSVVEYFHET YGFRIQHTQL PCLQVGNSNR PNYLPMEVCK
0501: IVEGQRYSKR LNERQITALL KVTCQRPIDR EKDILQTVQL NDYAKDNYAQ EFGIKISTSL ASVEARILPP PWLKYHESGR EGTCLPQVGQ WNMMNKKMIN
0601: GGTVNNWICI NFSRQVQDNL ARTFCQELAQ MCYVSGMAFN PEPVLPPVSA RPEQVEKVLK TRYHDATSKL SQGKEIDLLI VILPDNNGSL YGDLKRICET
0701: ELGIVSQCCL TKHVFKMSKQ YMANVALKIN VKVGGRNTVL VDALSRRIPL VSDRPTIIFG ADVTHPHPGE DSSPSIAAVV ASQDWPEITK YAGLVCAQAH
0801: RQELIQDLFK EWKDPQKGVV TGGMIKELLI AFRRSTGHKP LRIIFYRDGV SEGQFYQVLL YELDAIRKAC ASLEAGYQPP VTFVVVQKRH HTRLFAQNHN
0901: DRHSVDRSGN ILPGTVVDSK ICHPTEFDFY LCSHAGIQGT SRPAHYHVLW DENNFTADGL QSLTNNLCYT YARCTRSVSI VPPAYYAHLA AFRARFYMEP
1001: ETSDSGSMAS GSMARGGGMA GRSTRGPNVN AAVRPLPALK ENVKRVMFYC
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRIRYIPVGR SFYSPDIGKK QSLGDGLESW RGFYQSIRPT QMGLSLNIDM SSTAFIEANP VIQFVCDLLN
0401: RDISSRPLSD ADRVKIKKAL RGVKVEVTHR GNMRRKYRIS GLTAVATREL TFPVDERNTQ KSVVEYFHET YGFRIQHTQL PCLQVGNSNR PNYLPMEVCK
0501: IVEGQRYSKR LNERQITALL KVTCQRPIDR EKDILQTVQL NDYAKDNYAQ EFGIKISTSL ASVEARILPP PWLKYHESGR EGTCLPQVGQ WNMMNKKMIN
0601: GGTVNNWICI NFSRQVQDNL ARTFCQELAQ MCYVSGMAFN PEPVLPPVSA RPEQVEKVLK TRYHDATSKL SQGKEIDLLI VILPDNNGSL YGDLKRICET
0701: ELGIVSQCCL TKHVFKMSKQ YMANVALKIN VKVGGRNTVL VDALSRRIPL VSDRPTIIFG ADVTHPHPGE DSSPSIAAVV ASQDWPEITK YAGLVCAQAH
0801: RQELIQDLFK EWKDPQKGVV TGGMIKELLI AFRRSTGHKP LRIIFYRDGV SEGQFYQVLL YELDAIRKAC ASLEAGYQPP VTFVVVQKRH HTRLFAQNHN
0901: DRHSVDRSGN ILPGTVVDSK ICHPTEFDFY LCSHAGIQGT SRPAHYHVLW DENNFTADGL QSLTNNLCYT YARCTRSVSI VPPAYYAHLA AFRARFYMEP
1001: ETSDSGSMAS GSMARGGGMA GRSTRGPNVN AAVRPLPALK ENVKRVMFYC
Arabidopsis Description
AGO1ICU9 [Source:UniProtKB/TrEMBL;Acc:A0A178WL72]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.