CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra011993.1-P	Field mustard	plastid	99.48	98.55
CDX71410	Canola	nucleus	95.3	95.8
AT2G27880.1	Thale cress	cytosol, nucleus, plastid	78.06	74.92
Zm00001d015926_P001	Maize	nucleus	15.88	67.56
TraesCS4B01G026600.1	Wheat	cytosol	33.02	65.15
EER90726	Sorghum	cytosol	56.01	63.13
Zm00001d018436_P001	Maize	cytosol	8.05	63.11
TraesCS5A01G446000.1	Wheat	cytosol	55.17	62.19
Zm00001d005045_P001	Maize	cytosol, nucleus, peroxisome, plastid	14.63	60.61
VIT_06s0061g01040.t01	Wine grape	mitochondrion, nucleus	64.89	60.17
TraesCS4D01G024100.1	Wheat	plastid	53.19	59.39
TraesCS4A01G288300.1	Wheat	plastid	53.19	59.39
TraesCS4D01G024300.1	Wheat	cytosol	33.86	58.91
Zm00001d032611_P002	Maize	vacuole	22.88	58.87
KRH25139	Soybean	plastid	59.04	58.79
OQU91198	Sorghum	nucleus	45.45	58.55
KRH30536	Soybean	plastid	54.23	58.31
OQU88608	Sorghum	plastid	53.5	58.12
TraesCS5B01G468000.1	Wheat	plastid	52.87	57.96
HORVU2Hr1G031130.2	Barley	cytosol, nucleus	50.57	57.41
TraesCS5D01G454600.1	Wheat	cytosol	44.1	56.95
TraesCS3B01G287600.1	Wheat	nucleus	53.71	56.73
Os03t0789466-00	Rice	cytosol, mitochondrion, nucleus	26.33	55.14
TraesCS5B01G454200.1	Wheat	cytosol	38.77	54.96
OQU91197	Sorghum	plastid	50.68	54.86
TraesCS4A01G288000.1	Wheat	cytosol	41.07	54.81
Os03t0800200-01	Rice	plasma membrane	59.46	53.78
CDY04311	Canola	cytosol, nucleus, plastid	54.86	53.57
TraesCS5B01G452500.1	Wheat	nucleus	50.68	53.18
Zm00001d025691_P001	Maize	mitochondrion	10.76	52.82
TraesCS5B01G451400.2	Wheat	plastid	58.41	52.74
TraesCS5D01G454200.1	Wheat	cytosol, nucleus, plastid	57.99	52.71
Zm00001d009158_P003	Maize	golgi	24.03	52.63
Zm00001d036886_P001	Maize	plastid	12.33	52.21
CDY41831	Canola	nucleus	56.84	52.11
TraesCS5B01G455700.1	Wheat	cytosol, mitochondrion, plastid	53.6	52.08
Os03t0682600-00	Rice	nucleus	40.54	51.94
CDY68174	Canola	nucleus	57.05	51.9
CDY22332	Canola	plastid	52.87	51.9
CDX94724	Canola	plastid	52.98	51.68
Solyc06g074730.2.1	Tomato	nucleus	54.02	51.14
TraesCS2B01G195200.2	Wheat	nucleus	53.71	50.99
HORVU2Hr1G045050.1	Barley	cytosol, mitochondrion, plastid	10.87	50.98
TraesCS2D01G176500.1	Wheat	golgi, unclear	55.17	50.92
TraesCS2A01G168900.1	Wheat	cytosol	55.07	50.82
PGSC0003DMT400018363	Potato	cytosol, nucleus, plastid	54.02	50.44
Zm00001d013063_P001	Maize	nucleus	53.08	50.3
CDY23683	Canola	cytosol, nucleus, plastid	55.59	48.99
Zm00001d013542_P003	Maize	nucleus	53.29	48.34
Zm00001d007786_P001	Maize	nucleus	52.04	48.26
GSMUA_Achr4P17670_001	Banana	extracellular, plasma membrane	18.08	48.19
Os07t0188000-01	Rice	nucleus	52.56	47.81
TraesCS4B01G024000.1	Wheat	nucleus	51.1	47.75
HORVU4Hr1G004030.1	Barley	mitochondrion	50.68	46.95
TraesCS7D01G061600.1	Wheat	cytosol, mitochondrion, nucleus, plastid	23.82	43.26
CDY68123	Canola	cytosol, endoplasmic reticulum, nucleus	10.66	43.22
GSMUA_Achr6P04510_001	Banana	nucleus	55.69	43.09
TraesCS7A01G067500.2	Wheat	cytosol	37.62	42.15
CDY72062	Canola	plastid	13.06	42.09
Zm00001d033518_P001	Maize	nucleus	51.83	41.79
TraesCS5B01G458100.1	Wheat	cytosol	40.75	41.05
Zm00001d039440_P001	Maize	cytosol	9.4	36.89
CDX84712	Canola	nucleus	32.08	35.41
TraesCS5D01G192700.2	Wheat	nucleus	34.69	35.21
CDX79495	Canola	nucleus	31.77	35.06
CDY51501	Canola	nucleus	32.81	34.93
CDY48192	Canola	nucleus	33.44	34.71
CDX77061	Canola	nucleus	33.33	34.6
CDX92417	Canola	nucleus	23.2	34.47
CDY04475	Canola	nucleus	33.12	34.34
CDY09103	Canola	nucleus	32.39	34.22
CDY56413	Canola	nucleus	32.71	33.91
CDX92406	Canola	nucleus	31.77	33.63
CDX92405	Canola	nucleus	32.08	33.55
Os02t0616300-00	Rice	vacuole	11.6	33.53
CDY59516	Canola	nucleus	31.56	33.33
CDY07349	Canola	nucleus	34.17	33.23
CDY16587	Canola	nucleus	30.62	33.22
CDY28550	Canola	cytosol, plastid	33.44	32.79
CDY70429	Canola	plastid	28.94	31.23
EER93271	Sorghum	cytosol	31.77	30.04
CDY16595	Canola	nucleus	27.9	29.02
Zm00001d035554_P001	Maize	plastid	15.05	28.63
CDY02373	Canola	nucleus	30.3	28.35
CDY25885	Canola	cytosol	29.68	28.12
CDY55876	Canola	cytosol	30.2	27.92
CDY62055	Canola	nucleus	13.06	21.7
Os03t0789500-01	Rice	cytosol	0.52	2.2

Protein Annotations

Gene3D:2.170.260.10	Gene3D:3.30.420.10	Gene3D:3.40.50.2300	MapMan:35.1	GO:A0A078EU82	InterPro:ArgoL1
InterPro:ArgoL2	InterPro:Argonaute_Mid_dom	InterPro:Argonaute_N	EnsemblPlants:CDY04517	ProteinID:CDY04517	ProteinID:CDY04517.1
GO:GO:0003674	GO:GO:0003676	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00118686001	InterPro:IPR003100
InterPro:IPR003165	InterPro:IPR036397	InterPro:PAZ_dom	InterPro:PAZ_dom_sf	PFAM:PF02170	PFAM:PF02171
PFAM:PF08699	PFAM:PF16486	PFAM:PF16487	PFAM:PF16488	PFscan:PS50821	PFscan:PS50822
PANTHER:PTHR22891	PANTHER:PTHR22891:SF105	InterPro:Piwi	InterPro:RNaseH-like_sf	InterPro:RNaseH_sf	SMART:SM00949
SMART:SM00950	SMART:SM01163	SUPFAM:SSF101690	SUPFAM:SSF53098	UniParc:UPI0004EF01DF	SEG:seg

Description

BnaA07g13430D

Coordinates

chrLK031955:+:427888..432884

Molecular Weight (calculated)

106714.0 Da

IEP (calculated)

9.919

GRAVY (calculated)

-0.407

Length

957 amino acids

Sequence
(BLAST)

001: MSSRGGRGGG GGRRSDQSPG PVAWPALQSS GARGGRGRGN AAPVASSSSS PPSDAVSGAI GAVDVASSSS VREKPKASAS SDSDLSLGQE LAEKVQITTA
101: PPSSSKAVTF PVRPGFGQAG KKVTIRANHF LVQVADRDLY HYDVSISPEV ISKKVNRDVM TTLVKTYGES HMAKKIPAYD GRKSLYTAGP LPFESKEFVV
201: DLNDKKPAAS SKRDRKFRVA IKLASRPDLH QLQEFLRRKQ RDAPYETIQV LDVVLRDLPS QKFVSVGRSF FDPSLGRRGE LGDGVEYWSG YFQSLRLTQM
301: GLSLNIDVSA RSFYEPIFVT DFIGKYLNLR DFSRPLRDSD RVKVKKALKS LKVELAQFDF ARSVKVSGIS SCPISELRFT LEDNTQKTVV QYFAEKYNYR
401: VKYPALPAIQ SGSDSRPAYF PMELCRIAEG QRYTKKLNER QVTALLRATC QRPDIRDNSI KGMVKNNKYH EIDLVRKEFG MSVTDQLATV EARVLPPPLL
501: KYHESGREKM VNPRLGQWNM IDKKMINGAR VASWTSVCFS TRIDRNLPQE FCKQLIDMCV SKGMQFNPQP AIPFISCQPQ RIEEALCDIH KRAPGLQMLI
601: VILPDVTGSY GKIKRICETE LGIVSQCCQP NQVRKLNKQY MENVALKINV KTGGRNTVLD DAIRRRIPLI SDRPTIIFGA DVTHPQPGED SSPSIAAVVA
701: SMDWPEITKY RGLVSAQTHR EEIIEDLYKL VQDPQRGPVH TGMIREHLIA FRRATGQKPL RIIFYRDGVS EGQFSQVLLH EMTAIRKACA SLEERYLPPV
801: TFVVVQKRHH TRLFPAQHGN RETTDKSGNI QPGTVVDTKI CHPTEFDFYL NSHAGIQGTS RPAHYHVLVD ENGFTADALQ MLTNNLCYTF ARCTRSVSIV
901: PPAYYAHLAA FRARYYMESE NSDGGSSRSR NTTASTSAVV SLLPATKDNV KDVMFYC

Best Arabidopsis Sequence Match ( AT2G27880.1 )
(BLAST)

001: MSNRGGGGHG GASRGRGGGR RSDQRQDQSS GQVAWPGLQQ SYGGRGGSVS AGRGRGNVGR GENTGDLTAT QVPVASAVSG GRGRGNIGDP TFSVASSSKT
101: VSVASSSKEE SKNTEVSETM SNLQITSTET KPEMTSLPPA SSKAVTFPVR PGRGTLGKKV MVRANHFLVQ VADRDLYHYD VSINPEVISK TVNRNVMKLL
201: VKNYKDSHLG GKSPAYDGRK SLYTAGPLPF DSKEFVVNLA EKRADGSSGK DRPFKVAVKN VTSTDLYQLQ QFLDRKQREA PYDTIQVLDV VLRDKPSNDY
301: VSVGRSFFHT SLGKDARDGR GELGDGIEYW RGYFQSLRLT QMGLSLNIDV SARSFYEPIV VTDFISKFLN IRDLNRPLRD SDRLKVKKVL RTLKVKLLHW
401: NGTKSAKISG ISSLPIRELR FTLEDKSEKT VVQYFAEKYN YRVKYQALPA IQTGSDTRPV YLPMELCQID EGQRYTKRLN EKQVTALLKA TCQRPPDREN
501: SIKNLVVKNN YNDDLSKEFG MSVTTQLASI EARVLPPPML KYHDSGKEKM VNPRLGQWNM IDKKMVNGAK VTSWTCVSFS TRIDRGLPQE FCKQLIGMCV
601: SKGMEFKPQP AIPFISCPPE HIEEALLDIH KRAPGLQLLI VILPDVTGSY GKIKRICETE LGIVSQCCQP RQVNKLNKQY MENVALKINV KTGGRNTVLN
701: DAIRRNIPLI TDRPTIIMGA DVTHPQPGED SSPSIAAVVA SMDWPEINKY RGLVSAQAHR EEIIQDLYKL VQDPQRGLVH SGLIREHFIA FRRATGQIPQ
801: RIIFYRDGVS EGQFSQVLLH EMTAIRKACN SLQENYVPRV TFVIVQKRHH TRLFPEQHGN RDMTDKSGNI QPGTVVDTKI CHPNEFDFYL NSHAGIQGTS
901: RPAHYHVLLD ENGFTADQLQ MLTNNLCYTY ARCTKSVSIV PPAYYAHLAA FRARYYMESE MSDGGSSRSR SSTTGVGQVI SQLPAIKDNV KEVMFYC

Arabidopsis Description

AGO5Protein argonaute 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJK3]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.