CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G446000.1	Wheat	cytosol	89.05	89.05
TraesCS5B01G454200.1	Wheat	cytosol	64.9	81.63
TraesCS3B01G287600.1	Wheat	nucleus	84.45	79.14
TraesCS5D01G454600.1	Wheat	cytosol	67.96	77.87
TraesCS5B01G452500.1	Wheat	nucleus	81.39	75.77
Zm00001d013063_P001	Maize	nucleus	87.16	73.27
TraesCS5B01G451400.2	Wheat	plastid	89.05	71.32
TraesCS5D01G454200.1	Wheat	cytosol, nucleus, plastid	88.46	71.32
TraesCS5B01G455700.1	Wheat	cytosol, mitochondrion, plastid	80.09	69.04
OQU88608	Sorghum	plastid	69.49	66.97
OQU91198	Sorghum	nucleus	58.19	66.49
OQU91197	Sorghum	plastid	61.72	59.28
CDX71410	Canola	nucleus	63.13	56.3
CDY04517	Canola	plastid	63.13	56.01
Bra011993.1-P	Field mustard	plastid	63.25	55.59
TraesCS5B01G458100.1	Wheat	cytosol	61.84	55.26
VIT_06s0061g01040.t01	Wine grape	mitochondrion, nucleus	66.43	54.65
KRH25139	Soybean	plastid	60.9	53.8
VIT_08s0007g04360.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	53.59	53.47
KRH30536	Soybean	plastid	55.01	52.47
AT2G27880.1	Thale cress	cytosol, nucleus, plastid	61.37	52.26
TraesCS5D01G192700.2	Wheat	nucleus	55.95	50.37
KXG20286	Sorghum	cytosol	57.83	50.05
OQU82149	Sorghum	nucleus	62.07	48.93
KXG20965	Sorghum	nucleus	60.31	48.85
Solyc06g074730.2.1	Tomato	nucleus	57.72	48.47
PGSC0003DMT400018363	Potato	cytosol, nucleus, plastid	58.19	48.2
EES18841	Sorghum	nucleus	61.25	46.89
EER93271	Sorghum	cytosol	55.48	46.54
OQU86027	Sorghum	plastid	55.83	42.93
EER97198	Sorghum	nucleus	48.06	39.08
EER91156	Sorghum	nucleus	42.4	38.5
KXG23356	Sorghum	nucleus	35.69	34.39
OQU86696	Sorghum	nucleus	36.04	34.0
EES18816	Sorghum	nucleus	35.92	33.55
EES00570	Sorghum	nucleus	35.34	33.41
EER92100	Sorghum	cytosol	37.46	30.78
KXG27113	Sorghum	nucleus	32.04	24.91
OQU89939	Sorghum	endoplasmic reticulum, plasma membrane	25.8	21.75

Protein Annotations

Gene3D:2.170.260.10	Gene3D:3.30.420.10	Gene3D:3.40.50.2300	MapMan:35.1	InterPro:ArgoL1	InterPro:ArgoL2
InterPro:Argonaute_Mid_dom	InterPro:Argonaute_N	UniProt:C5WX38	EnsemblPlants:EER90726	ProteinID:EER90726	ProteinID:EER90726.3
GO:GO:0003674	GO:GO:0003676	GO:GO:0005488	GO:GO:0005515	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0031047	InterPro:IPR003100	InterPro:IPR003165	InterPro:IPR036397	InterPro:PAZ_dom
InterPro:PAZ_dom_sf	PFAM:PF02170	PFAM:PF02171	PFAM:PF08699	PFAM:PF16486	PFAM:PF16487
PFAM:PF16488	PFscan:PS50821	PFscan:PS50822	PANTHER:PTHR22891	PANTHER:PTHR22891:SF24	InterPro:Piwi
InterPro:RNaseH-like_sf	InterPro:RNaseH_sf	SMART:SM00949	SMART:SM00950	SMART:SM01163	EnsemblPlantsGene:SORBI_3001G053700
SUPFAM:SSF101690	SUPFAM:SSF53098	UniParc:UPI000B8B9915	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr1:+:4015082..4023846

Molecular Weight (calculated)

96485.8 Da

IEP (calculated)

9.222

GRAVY (calculated)

-0.426

Length

849 amino acids

Sequence
(BLAST)

001: MIRANHFLVN VADNNLFHYD VAINPESKSR QTNREVLNEL IKLHGKTALG GKLPAYDGRK SLYTAGSLPF ESEEFVVTLV DPEKKDKERA EREYKITIRI
101: AGRTDLYHLQ QFLRGRQRDM PQETIQVLDV VLRESPSWNY VTVSRSFFST TFGHRGDIGE GLECWRGYYQ SLRPTQMGLS LNIDISATSF FKPVSVIKFV
201: EEYLNMRDTS RPLSDRDRVK IKKALRGVRI ETTHQQDQIR RYKITGVTSI PMSQLIFPVD DKGTRKTVVQ YFWDKYNYSL KHGSWPCLQA GSDSRPVYLP
301: MEVCKILEGQ RYSKKLNDRQ VTNILRATCK RPQEREQSIH DMVLHNKYAD DRFAQEFGIK VSSDLVTVPA RVLPPPLLKY HESGREKTCA PSVGQWNMIN
401: KKMINGGTID NWTCLNFSRM RPDEVQRFCM DLIHMCNATG MVVNPRPFVD VKSAAPNHIE NALRDVHRRA TQMLAQQGVG NQLQLLIVIL PDVSGSYGKI
501: KRVCETDIGI VSQCCLPKHA SRPNKQYLEN VALKINVKVG GRNTVLERAF VRNGIPFVSE VPTIIFGADV THPPPGEDSA SSIAAVVASM DWPEITKYRG
601: LVSAQPHRQE IIEDLFTVTK DLQKGHSVNG GMIRELLIAF RRKTNRRPER IIFYRDGVSE GQFSHVLLHE MDAIRKACAS LEEGYLPPVT FVVVQKRHHT
701: RLFPEVHGRR DMTDKSGNIL PGTVVDQQIC HPTEFDFYLC SHAGIQGTSR PTHYHVLYDE NHFTADALQS LTNNLCYTYA RCTRAVSVVP PAYYAHLAAF
801: RARYYVEGES SDGGSTPGSS GQTVAREGPV EVRQLPKIKD NVKDVMFYC

Best Arabidopsis Sequence Match ( AT2G27880.1 )
(BLAST)

001: MSNRGGGGHG GASRGRGGGR RSDQRQDQSS GQVAWPGLQQ SYGGRGGSVS AGRGRGNVGR GENTGDLTAT QVPVASAVSG GRGRGNIGDP TFSVASSSKT
101: VSVASSSKEE SKNTEVSETM SNLQITSTET KPEMTSLPPA SSKAVTFPVR PGRGTLGKKV MVRANHFLVQ VADRDLYHYD VSINPEVISK TVNRNVMKLL
201: VKNYKDSHLG GKSPAYDGRK SLYTAGPLPF DSKEFVVNLA EKRADGSSGK DRPFKVAVKN VTSTDLYQLQ QFLDRKQREA PYDTIQVLDV VLRDKPSNDY
301: VSVGRSFFHT SLGKDARDGR GELGDGIEYW RGYFQSLRLT QMGLSLNIDV SARSFYEPIV VTDFISKFLN IRDLNRPLRD SDRLKVKKVL RTLKVKLLHW
401: NGTKSAKISG ISSLPIRELR FTLEDKSEKT VVQYFAEKYN YRVKYQALPA IQTGSDTRPV YLPMELCQID EGQRYTKRLN EKQVTALLKA TCQRPPDREN
501: SIKNLVVKNN YNDDLSKEFG MSVTTQLASI EARVLPPPML KYHDSGKEKM VNPRLGQWNM IDKKMVNGAK VTSWTCVSFS TRIDRGLPQE FCKQLIGMCV
601: SKGMEFKPQP AIPFISCPPE HIEEALLDIH KRAPGLQLLI VILPDVTGSY GKIKRICETE LGIVSQCCQP RQVNKLNKQY MENVALKINV KTGGRNTVLN
701: DAIRRNIPLI TDRPTIIMGA DVTHPQPGED SSPSIAAVVA SMDWPEINKY RGLVSAQAHR EEIIQDLYKL VQDPQRGLVH SGLIREHFIA FRRATGQIPQ
801: RIIFYRDGVS EGQFSQVLLH EMTAIRKACN SLQENYVPRV TFVIVQKRHH TRLFPEQHGN RDMTDKSGNI QPGTVVDTKI CHPNEFDFYL NSHAGIQGTS
901: RPAHYHVLLD ENGFTADQLQ MLTNNLCYTY ARCTKSVSIV PPAYYAHLAA FRARYYMESE MSDGGSSRSR SSTTGVGQVI SQLPAIKDNV KEVMFYC

Arabidopsis Description

AGO5Protein argonaute 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJK3]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.