Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G27040.1 | OQU84386 | AT2G40030.1 | 19410546 |
| AT2G27040.1 | OQU78267 | AT5G04290.1 | 19410546 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d039214_P025 | Maize | nucleus | 95.71 | 94.16 |
| Os04t0151800-02 | Rice | nucleus | 85.37 | 85.18 |
| TraesCS1B01G480100.1 | Wheat | nucleus | 79.1 | 77.56 |
| TraesCS1D01G453600.1 | Wheat | nucleus | 78.66 | 77.55 |
| TraesCS1A01G445500.1 | Wheat | golgi, unclear | 78.88 | 77.51 |
| OQU86696 | Sorghum | nucleus | 74.48 | 75.22 |
| TraesCS7A01G533100.1 | Wheat | cytosol | 73.82 | 74.47 |
| PGSC0003DMT400070806 | Potato | nucleus | 23.76 | 73.97 |
| TraesCS7D01G520400.1 | Wheat | nucleus | 72.72 | 72.72 |
| TraesCS7B01G450300.1 | Wheat | nucleus | 73.05 | 72.25 |
| GSMUA_Achr9P05150_001 | Banana | nucleus | 71.07 | 70.6 |
| TraesCS7B01G450200.2 | Wheat | nucleus | 71.07 | 69.76 |
| VIT_06s0009g01200.t01 | Wine grape | nucleus | 69.53 | 69.22 |
| PGSC0003DMT400069459 | Potato | nucleus | 69.09 | 68.78 |
| Solyc06g073540.2.1 | Tomato | nucleus | 68.65 | 68.35 |
| Solyc01g008960.2.1 | Tomato | nucleus | 67.66 | 67.66 |
| KRH14678 | Soybean | nucleus | 67.11 | 67.33 |
| PGSC0003DMT400058471 | Potato | nucleus | 67.11 | 67.11 |
| KRH73469 | Soybean | nucleus | 66.78 | 67.0 |
| CDY72062 | Canola | plastid | 21.67 | 66.33 |
| VIT_08s0040g00070.t01 | Wine grape | nucleus | 66.12 | 65.47 |
| KRG89867 | Soybean | nucleus | 67.33 | 64.63 |
| Solyc06g073530.1.1 | Tomato | nucleus | 64.14 | 64.49 |
| Solyc01g096750.1.1 | Tomato | nucleus | 62.49 | 64.47 |
| CDX77061 | Canola | nucleus | 64.47 | 63.56 |
| CDY04475 | Canola | nucleus | 64.47 | 63.49 |
| CDY56413 | Canola | nucleus | 64.47 | 63.49 |
| CDY48192 | Canola | nucleus | 64.36 | 63.45 |
| Bra034318.1-P | Field mustard | nucleus | 64.25 | 63.34 |
| AT2G27040.1 | Thale cress | nucleus | 64.25 | 63.2 |
| PGSC0003DMT400039204 | Potato | cytosol | 10.34 | 62.67 |
| AT5G21150.1 | Thale cress | nucleus | 61.72 | 62.61 |
| Bra020152.1-P | Field mustard | nucleus | 62.38 | 62.58 |
| CDY09103 | Canola | nucleus | 62.27 | 62.47 |
| VIT_13s0175g00140.t01 | Wine grape | nucleus | 58.42 | 60.0 |
| Bra002361.1-P | Field mustard | nucleus | 60.07 | 59.93 |
| CDX92417 | Canola | nucleus | 42.24 | 59.63 |
| CDX92405 | Canola | nucleus | 59.63 | 59.23 |
| EES00570 | Sorghum | nucleus | 58.09 | 58.8 |
| AT5G21030.2 | Thale cress | cytosol | 54.9 | 58.43 |
| CDX92406 | Canola | nucleus | 57.87 | 58.19 |
| KXG23356 | Sorghum | nucleus | 56.22 | 58.0 |
| CDY59516 | Canola | nucleus | 57.54 | 57.73 |
| CDY16587 | Canola | nucleus | 55.89 | 57.6 |
| Bra002360.1-P | Field mustard | nucleus | 57.65 | 56.34 |
| KRH56276 | Soybean | cytosol | 48.07 | 52.59 |
| CDY16595 | Canola | nucleus | 52.59 | 51.96 |
| Solyc03g111760.2.1 | Tomato | mitochondrion | 47.19 | 46.83 |
| CDY62055 | Canola | nucleus | 27.17 | 42.88 |
| OQU91198 | Sorghum | nucleus | 29.48 | 36.07 |
| EER90726 | Sorghum | cytosol | 33.55 | 35.92 |
| OQU88608 | Sorghum | plastid | 32.67 | 33.71 |
| OQU91197 | Sorghum | plastid | 32.78 | 33.71 |
| KXG20286 | Sorghum | cytosol | 35.2 | 32.62 |
| KXG20965 | Sorghum | nucleus | 35.31 | 30.63 |
| OQU82149 | Sorghum | nucleus | 36.19 | 30.55 |
| Bra002349.1-P | Field mustard | nucleus | 54.57 | 29.16 |
| EES18841 | Sorghum | nucleus | 35.42 | 29.04 |
| OQU86027 | Sorghum | plastid | 34.87 | 28.71 |
| EER97198 | Sorghum | nucleus | 32.23 | 28.07 |
| EER91156 | Sorghum | nucleus | 28.71 | 27.91 |
| EER92100 | Sorghum | cytosol | 28.82 | 25.36 |
| KXG27113 | Sorghum | nucleus | 27.61 | 22.99 |
| EER93271 | Sorghum | cytosol | 22.11 | 19.86 |
| OQU89939 | Sorghum | endoplasmic reticulum, plasma membrane | 18.59 | 16.78 |
Protein Annotations
| MapMan:12.5.1.13 | Gene3D:2.170.260.10 | Gene3D:3.30.420.10 | Gene3D:3.40.50.2300 | EntrezGene:8066572 | InterPro:ArgoL1 |
| InterPro:ArgoL2 | InterPro:Argonaute_Mid_dom | InterPro:Argonaute_N | UniProt:C5YX36 | EnsemblPlants:EES18816 | ProteinID:EES18816 |
| ProteinID:EES18816.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0031047 | InterPro:IPR003100 | InterPro:IPR003165 | InterPro:IPR036397 |
| InterPro:PAZ_dom | InterPro:PAZ_dom_sf | PFAM:PF02170 | PFAM:PF02171 | PFAM:PF08699 | PFAM:PF16486 |
| PFAM:PF16487 | PFAM:PF16488 | PFscan:PS50821 | PFscan:PS50822 | PANTHER:PTHR22891 | PANTHER:PTHR22891:SF56 |
| InterPro:Piwi | InterPro:RNaseH-like_sf | InterPro:RNaseH_sf | SMART:SM00950 | SMART:SM01163 | EnsemblPlantsGene:SORBI_3009G259900 |
| SUPFAM:SSF101690 | SUPFAM:SSF53098 | unigene:Sbi.6275 | UniParc:UPI0001A88908 | RefSeq:XP_002440386.1 | SEG:seg |
Description
hypothetical protein
Coordinates
chr9:+:59321024..59328186
Molecular Weight (calculated)
101480.0 Da
IEP (calculated)
8.803
GRAVY (calculated)
-0.407
Length
909 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSHDGEDEE LPPPPPVPPD VVPIKAEDVV GEPPANKPIK PKRLLMDRPG IGRKGQLAQL YSNHFKVAVK STEDFFFHYY VNLKYEDDQP VEGKGIGRKV
101: IDKLQQTYRA ELSNKDFAYD GEKSLFTVGG LPQKNNEFTV VLEDASTGKT AANGSPGGND SPGGGDRKRV RRPYQTKTFK VEINFAAKVP MSAIGQVIRG
201: EETENSLEAL RVLDIILRQH SAEQGCLLVK QSFFYNNPSN FVDLGGGVMG CRGFHSSFRG TQSGLSLNVD VSTTMIVKPG PVIDFLLSNQ NVNDPSRIDW
301: QKAKRALKGL RIRTTPANAE FKIFGLSERI CKEQTFPLRQ RNGSNGDCDT IDITVYDYYA KKGIDLKYSG DLPCINTGRA KRPTYFPIEL CCLVPLQRYT
401: KALSTLQRSS LVEKSRQKPQ ERMTVLNDAL QRSNYDSDPM LRACGVSVAP KFTQVEGRIL QAPKLKAGNG DDIFSRNGRW NFTNRKFYQT CSVDKWAVVN
501: FSARCDVRNL IRDLMRNASA KGIQMEEPFD VFEESPSMRR APVSRRVDDM FGQIKSKLPG APRFLMCLLP ERKNCEVYGP WKRKCLAEFG IVTQCLAPTR
601: VNDPYLLNLL MKINAKLGGL NSLLQVEASP SIPHVSEVPT IILGMDVSHG HPGQDRPSVA AVVSSRQWPL ISKYRASVHT QSARLEMMSS LFKPRGTDDD
701: GLIRESLIDF YTSSGKRKPD HIIIFRDGVS ESQFTQVINI ELDQIIEACK FLDEKWSPKF TVIVAQKNHH TKFFQTGSPD NVLPGTVVDN KVCHPKNFDF
801: YMCAHAGMIG TTRPTHYHVL HDEIGFSADE MQEFVHSLSY VYQRSTTAIS VVAPICYAHL AAAQVGTFLK FEEMSDTSSS QGGHTSAGSA PVPELPRLHE
901: KVRSSMFFC
101: IDKLQQTYRA ELSNKDFAYD GEKSLFTVGG LPQKNNEFTV VLEDASTGKT AANGSPGGND SPGGGDRKRV RRPYQTKTFK VEINFAAKVP MSAIGQVIRG
201: EETENSLEAL RVLDIILRQH SAEQGCLLVK QSFFYNNPSN FVDLGGGVMG CRGFHSSFRG TQSGLSLNVD VSTTMIVKPG PVIDFLLSNQ NVNDPSRIDW
301: QKAKRALKGL RIRTTPANAE FKIFGLSERI CKEQTFPLRQ RNGSNGDCDT IDITVYDYYA KKGIDLKYSG DLPCINTGRA KRPTYFPIEL CCLVPLQRYT
401: KALSTLQRSS LVEKSRQKPQ ERMTVLNDAL QRSNYDSDPM LRACGVSVAP KFTQVEGRIL QAPKLKAGNG DDIFSRNGRW NFTNRKFYQT CSVDKWAVVN
501: FSARCDVRNL IRDLMRNASA KGIQMEEPFD VFEESPSMRR APVSRRVDDM FGQIKSKLPG APRFLMCLLP ERKNCEVYGP WKRKCLAEFG IVTQCLAPTR
601: VNDPYLLNLL MKINAKLGGL NSLLQVEASP SIPHVSEVPT IILGMDVSHG HPGQDRPSVA AVVSSRQWPL ISKYRASVHT QSARLEMMSS LFKPRGTDDD
701: GLIRESLIDF YTSSGKRKPD HIIIFRDGVS ESQFTQVINI ELDQIIEACK FLDEKWSPKF TVIVAQKNHH TKFFQTGSPD NVLPGTVVDN KVCHPKNFDF
801: YMCAHAGMIG TTRPTHYHVL HDEIGFSADE MQEFVHSLSY VYQRSTTAIS VVAPICYAHL AAAQVGTFLK FEEMSDTSSS QGGHTSAGSA PVPELPRLHE
901: KVRSSMFFC
001: MDSTNGNGAD LESANGANGS GVTEALPPPP PVIPPNVEPV RVKTELAEKK GPVRVPMARK GFGTRGQKIP LLTNHFKVDV ANLQGHFFHY SVALFYDDGR
101: PVEQKGVGRK ILDKVHQTYH SDLDGKEFAY DGEKTLFTYG ALPSNKMDFS VVLEEVSATR ANGNGSPNGN ESPSDGDRKR LRRPNRSKNF RVEISYAAKI
201: PLQALANAMR GQESENSQEA IRVLDIILRQ HAARQGCLLV RQSFFHNDPT NCEPVGGNIL GCRGFHSSFR TTQGGMSLNM DVTTTMIIKP GPVVDFLIAN
301: QNARDPYSID WSKAKRTLKN LRVKVSPSGQ EFKITGLSDK PCREQTFELK KRNPNENGEF ETTEVTVADY FRDTRHIDLQ YSADLPCINV GKPKRPTYIP
401: LELCALVPLQ RYTKALTTFQ RSALVEKSRQ KPQERMTVLS KALKVSNYDA EPLLRSCGIS ISSNFTQVEG RVLPAPKLKM GCGSETFPRN GRWNFNNKEF
501: VEPTKIQRWV VVNFSARCNV RQVVDDLIKI GGSKGIEIAS PFQVFEEGNQ FRRAPPMIRV ENMFKDIQSK LPGVPQFILC VLPDKKNSDL YGPWKKKNLT
601: EFGIVTQCMA PTRQPNDQYL TNLLLKINAK LGGLNSMLSV ERTPAFTVIS KVPTIILGMD VSHGSPGQSD VPSIAAVVSS REWPLISKYR ASVRTQPSKA
701: EMIESLVKKN GTEDDGIIKE LLVDFYTSSN KRKPEHIIIF RDGVSESQFN QVLNIELDQI IEACKLLDAN WNPKFLLLVA QKNHHTKFFQ PTSPENVPPG
801: TIIDNKICHP KNNDFYLCAH AGMIGTTRPT HYHVLYDEIG FSADELQELV HSLSYVYQRS TSAISVVAPI CYAHLAAAQL GTFMKFEDQS ETSSSHGGIT
901: APGPISVAQL PRLKDNVANS MFFC
101: PVEQKGVGRK ILDKVHQTYH SDLDGKEFAY DGEKTLFTYG ALPSNKMDFS VVLEEVSATR ANGNGSPNGN ESPSDGDRKR LRRPNRSKNF RVEISYAAKI
201: PLQALANAMR GQESENSQEA IRVLDIILRQ HAARQGCLLV RQSFFHNDPT NCEPVGGNIL GCRGFHSSFR TTQGGMSLNM DVTTTMIIKP GPVVDFLIAN
301: QNARDPYSID WSKAKRTLKN LRVKVSPSGQ EFKITGLSDK PCREQTFELK KRNPNENGEF ETTEVTVADY FRDTRHIDLQ YSADLPCINV GKPKRPTYIP
401: LELCALVPLQ RYTKALTTFQ RSALVEKSRQ KPQERMTVLS KALKVSNYDA EPLLRSCGIS ISSNFTQVEG RVLPAPKLKM GCGSETFPRN GRWNFNNKEF
501: VEPTKIQRWV VVNFSARCNV RQVVDDLIKI GGSKGIEIAS PFQVFEEGNQ FRRAPPMIRV ENMFKDIQSK LPGVPQFILC VLPDKKNSDL YGPWKKKNLT
601: EFGIVTQCMA PTRQPNDQYL TNLLLKINAK LGGLNSMLSV ERTPAFTVIS KVPTIILGMD VSHGSPGQSD VPSIAAVVSS REWPLISKYR ASVRTQPSKA
701: EMIESLVKKN GTEDDGIIKE LLVDFYTSSN KRKPEHIIIF RDGVSESQFN QVLNIELDQI IEACKLLDAN WNPKFLLLVA QKNHHTKFFQ PTSPENVPPG
801: TIIDNKICHP KNNDFYLCAH AGMIGTTRPT HYHVLYDEIG FSADELQELV HSLSYVYQRS TSAISVVAPI CYAHLAAAQL GTFMKFEDQS ETSSSHGGIT
901: APGPISVAQL PRLKDNVANS MFFC
Arabidopsis Description
AGO4Protein argonaute 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVD5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.