Factsheet for AT5G21030.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
plasma membrane 1
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY72062	Canola	plastid	25.29	72.73
CDX92417	Canola	nucleus	51.76	68.63
CDY16587	Canola	nucleus	68.97	66.78
AT5G21150.1	Thale cress	nucleus	69.91	66.63
AT2G27040.1	Thale cress	nucleus	63.35	58.55
GSMUA_Achr9P05150_001	Banana	nucleus	61.24	57.16
Os01t0275600-01	Rice	nucleus	60.3	56.97
Zm00001d008249_P012	Maize	nucleus	59.6	56.56
Zm00001d040429_P012	Maize	nucleus	59.37	56.27
OQU86696	Sorghum	nucleus	59.25	56.22
Os04t0151800-02	Rice	nucleus	59.84	56.09
TraesCS3A01G188400.1	Wheat	nucleus	59.95	55.9
HORVU3Hr1G038830.1	Barley	nucleus	59.6	55.21
EES18816	Sorghum	nucleus	58.43	54.9
TraesCS7D01G458800.1	Wheat	nucleus	29.63	54.29
TraesCS3B01G217300.2	Wheat	golgi, nucleus, unclear	59.95	54.24
TraesCS1D01G453600.1	Wheat	nucleus	57.73	53.47
Zm00001d039214_P025	Maize	nucleus	57.85	53.46
TraesCS1B01G480100.1	Wheat	nucleus	57.96	53.4
TraesCS1A01G445500.1	Wheat	golgi, unclear	57.61	53.19
TraesCS7A01G533100.1	Wheat	cytosol	55.62	52.72
TraesCS7D01G520400.1	Wheat	nucleus	56.09	52.7
TraesCS7B01G450300.1	Wheat	nucleus	56.44	52.45
TraesCS3D01G191600.5	Wheat	nucleus	59.84	51.0
TraesCS7B01G450200.2	Wheat	nucleus	54.68	50.43
TraesCS7A01G521000.1	Wheat	nucleus	47.42	49.94
TraesCS7B01G437900.1	Wheat	cytosol	46.96	49.69
AT2G32940.1	Thale cress	nucleus	50.7	49.32
TraesCS7B01G437700.1	Wheat	nucleus	50.0	48.58
EES00570	Sorghum	nucleus	50.94	48.44
Os01t0275200-00	Rice	golgi, peroxisome, plastid	26.0	47.54
PGSC0003DMT400039204	Potato	cytosol	8.31	47.33
TraesCS7B01G373400.1	Wheat	nucleus	40.28	43.77
Solyc03g111760.2.1	Tomato	mitochondrion	45.08	42.03
HORVU7Hr1G107770.1	Barley	nucleus	27.28	38.96
TraesCS7D01G458900.1	Wheat	mitochondrion	8.2	38.46
Bra002349.1-P	Field mustard	nucleus	69.2	34.74
AT2G27880.1	Thale cress	cytosol, nucleus, plastid	34.78	29.79
AT5G43810.3	Thale cress	nucleus	34.43	29.76
AT1G48410.2	Thale cress	nucleus	34.66	28.19
AT1G69440.1	Thale cress	cytosol	28.34	24.44
AT1G31280.1	Thale cress	nucleus	26.46	22.29
AT1G31290.1	Thale cress	nucleus	27.4	19.6

Protein Annotations

MapMan:12.5.1.13	Gene3D:2.170.260.10	Gene3D:3.30.420.10	Gene3D:3.40.50.2300	EntrezGene:832227	UniProt:A0A1P8BDI0
ProteinID:ANM69654.1	ArrayExpress:AT5G21030	EnsemblPlantsGene:AT5G21030	RefSeq:AT5G21030	TAIR:AT5G21030	RefSeq:AT5G21030-TAIR-G
EnsemblPlants:AT5G21030.2	InterPro:ArgoL1	InterPro:ArgoL2	InterPro:Argonaute_Mid_dom	InterPro:Argonaute_N	Unigene:At.54936
GO:GO:0003674	GO:GO:0003676	GO:GO:0005488	GO:GO:0005515	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0031047	InterPro:IPR003100	InterPro:IPR003165	InterPro:IPR036397	RefSeq:NP_001331316.1
InterPro:PAZ_dom	InterPro:PAZ_dom_sf	PFAM:PF02170	PFAM:PF02171	PFAM:PF08699	PFAM:PF16486
PFAM:PF16487	PFAM:PF16488	PFscan:PS50821	PFscan:PS50822	PANTHER:PTHR22891	PANTHER:PTHR22891:SF20
InterPro:Piwi	InterPro:RNaseH-like_sf	InterPro:RNaseH_sf	SMART:SM00950	SMART:SM01163	SUPFAM:SSF101690
SUPFAM:SSF53098	UniParc:UPI00084900C2	SEG:seg	:	:	:

Description

PAZ domain-containing protein / piwi domain-containing protein [Source:TAIR;Acc:AT5G21030]

Coordinates

chr5:-:7139892..7144272

Molecular Weight (calculated)

96035.7 Da

IEP (calculated)

8.989

GRAVY (calculated)

-0.345

Length

854 amino acids

Sequence
(BLAST)

001: MDTTLPPPQH MEREPLKSKS SLLPMTRRGN GSKGQKILLL TNHFRVNFRK PNSHNFFHYS VTITYEDGSP LLAKGFGRKI LEKVQQTCQA DLGCKHFAYD
101: GDKNLYTVGP LPRSSLDFSV VLETAPSRRN ADKRLKLPHQ SKKFNVAILF APPEIPMEAI ANALQGKKTK HLLDAIRVMD CILSQNAARQ GCLLVRQSFF
201: HNDAKYFANI GEGVDCCKGF HSSFRTTQGG LSLNIDVSTA MIVKPGPVVD FLIANQGVND PFSINWKKAK NTLKNLRVKV LPSNQEYKIT GLSGLHCKDQ
301: TFTWKKRNQN REFEEVEITV SDYFTRIREI ELRYSGGLPC INVGKPNRPT YFPIELCELV SLQRYTKALT KFQRSNLIKE SRQNPQQRIG VLTRALKTSN
401: YNDDPMLQEC GVRIGSDFTQ VEGRVLPTPK LKAGKEQDIY PINGSWNFKN KTFFKPATVT RWAVVNFSAR CDPQKIIDDL TRCGKMKGIN VDSPYHVVFE
501: ENPQFKDATG SVRVDKMFQH LQSILGEVPP KFLLCILEKK NSDVYEKSCS MWNCECIVPP QNLNDQYLTN LLLKINAKLG GLNSVLDMEL SGTMPLVMRV
601: PTIIIGMDVS HGSPGQSDHI PSIAAVVSSR EWPLISKYRA CVRTQSPKVE MIDSLFKPVS DKDDQGIMRE LLLDFHSSSG KKPNHIIIFR DGVSESQFNQ
701: VLNIELDQMM QINHHTKFFQ TESPNNVLPG TIIDSNICHQ HNNDFYLCAH AGKIGTTRPT HYHVLYDEIG FDTDQLQELV HSLSYVYQRS TTAISLVAPI
801: CYAHLAAAQM ATAMKFEDMS ETSSSHGGIT TAGAVPVPPM PKLNTNVASS MFFC

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.