Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d010719_P002 | |
| Zm00001d038644_P004 | |
| Zm00001d053872_P021 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G27040.1 | Zm00001d053872_P021 | AT2G40030.1 | 19410546 |
| AT2G27040.1 | Zm00001d010719_P002 | AT5G04290.1 | 19410546 |
| AT2G27040.1 | Zm00001d038644_P004 | AT5G04290.1 | 19410546 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d008249_P012 | Maize | nucleus | 95.45 | 95.56 |
| OQU86696 | Sorghum | nucleus | 94.34 | 94.44 |
| Os01t0275600-01 | Rice | nucleus | 84.35 | 84.07 |
| TraesCS3A01G188400.1 | Wheat | nucleus | 83.8 | 82.42 |
| HORVU3Hr1G038830.1 | Barley | nucleus | 83.57 | 81.67 |
| TraesCS3B01G217300.2 | Wheat | golgi, nucleus, unclear | 83.8 | 79.98 |
| PGSC0003DMT400070806 | Potato | nucleus | 24.64 | 76.03 |
| TraesCS3D01G191600.5 | Wheat | nucleus | 83.68 | 75.25 |
| Zm00001d039214_P025 | Maize | nucleus | 75.58 | 73.7 |
| GSMUA_Achr9P05150_001 | Banana | nucleus | 73.14 | 72.02 |
| VIT_06s0009g01200.t01 | Wine grape | nucleus | 72.59 | 71.63 |
| KRH14678 | Soybean | nucleus | 71.7 | 71.3 |
| KRH73469 | Soybean | nucleus | 71.25 | 70.86 |
| Solyc01g008960.2.1 | Tomato | nucleus | 71.48 | 70.85 |
| PGSC0003DMT400058471 | Potato | nucleus | 71.03 | 70.41 |
| PGSC0003DMT400069459 | Potato | nucleus | 70.37 | 69.44 |
| Solyc06g073540.2.1 | Tomato | nucleus | 70.37 | 69.44 |
| CDY72062 | Canola | plastid | 22.64 | 68.69 |
| Solyc01g096750.1.1 | Tomato | nucleus | 67.04 | 68.56 |
| VIT_08s0040g00070.t01 | Wine grape | nucleus | 68.37 | 67.1 |
| KRG89867 | Soybean | nucleus | 69.81 | 66.42 |
| CDY48192 | Canola | nucleus | 67.59 | 66.05 |
| CDX77061 | Canola | nucleus | 67.59 | 66.05 |
| Bra034318.1-P | Field mustard | nucleus | 67.48 | 65.94 |
| AT2G27040.1 | Thale cress | nucleus | 67.37 | 65.69 |
| CDY04475 | Canola | nucleus | 67.26 | 65.66 |
| CDY56413 | Canola | nucleus | 67.26 | 65.66 |
| Solyc06g073530.1.1 | Tomato | nucleus | 65.04 | 64.82 |
| Bra020152.1-P | Field mustard | nucleus | 64.93 | 64.57 |
| CDY09103 | Canola | nucleus | 64.82 | 64.46 |
| AT5G21150.1 | Thale cress | nucleus | 63.6 | 63.95 |
| CDX92417 | Canola | nucleus | 45.17 | 63.2 |
| Bra002361.1-P | Field mustard | nucleus | 62.93 | 62.24 |
| VIT_13s0175g00140.t01 | Wine grape | nucleus | 60.82 | 61.92 |
| CDX92405 | Canola | nucleus | 62.15 | 61.2 |
| PGSC0003DMT400039204 | Potato | cytosol | 10.1 | 60.67 |
| CDX92406 | Canola | nucleus | 60.16 | 59.96 |
| CDY16587 | Canola | nucleus | 58.6 | 59.86 |
| CDY59516 | Canola | nucleus | 59.82 | 59.49 |
| AT5G21030.2 | Thale cress | cytosol | 56.27 | 59.37 |
| Bra002360.1-P | Field mustard | nucleus | 59.82 | 57.96 |
| Zm00001d019905_P003 | Maize | nucleus | 58.6 | 57.33 |
| KRH56276 | Soybean | cytosol | 51.17 | 55.48 |
| CDY16595 | Canola | nucleus | 55.38 | 54.24 |
| Solyc03g111760.2.1 | Tomato | mitochondrion | 48.06 | 47.27 |
| Zm00001d015926_P001 | Maize | nucleus | 11.21 | 44.89 |
| CDY62055 | Canola | nucleus | 28.52 | 44.62 |
| Zm00001d005045_P001 | Maize | cytosol, nucleus, peroxisome, plastid | 9.99 | 38.96 |
| Zm00001d026146_P001 | Maize | nucleus | 5.99 | 36.99 |
| Zm00001d018436_P001 | Maize | cytosol | 4.99 | 36.89 |
| Zm00001d044183_P001 | Maize | cytosol | 7.1 | 35.36 |
| Zm00001d032611_P002 | Maize | vacuole | 14.54 | 35.22 |
| Zm00001d025691_P001 | Maize | mitochondrion | 7.55 | 34.87 |
| Zm00001d036917_P009 | Maize | nucleus | 35.41 | 33.02 |
| Zm00001d025073_P001 | Maize | cytosol | 14.21 | 32.99 |
| Zm00001d037833_P001 | Maize | mitochondrion | 8.99 | 32.66 |
| Zm00001d025331_P002 | Maize | cytosol | 19.98 | 32.61 |
| Zm00001d009158_P003 | Maize | golgi | 15.65 | 32.27 |
| Zm00001d046438_P003 | Maize | cytosol | 35.18 | 31.54 |
| Bra002349.1-P | Field mustard | nucleus | 57.71 | 30.57 |
| Zm00001d036886_P001 | Maize | plastid | 7.55 | 30.09 |
| Zm00001d021345_P001 | Maize | nucleus | 30.52 | 29.6 |
| Zm00001d013542_P003 | Maize | nucleus | 34.63 | 29.57 |
| Zm00001d002316_P003 | Maize | plastid | 28.08 | 29.56 |
| Zm00001d026300_P001 | Maize | nucleus | 28.86 | 29.51 |
| Zm00001d026111_P014 | Maize | nucleus | 35.29 | 29.04 |
| Zm00001d011096_P059 | Maize | nucleus | 35.63 | 28.97 |
| Zm00001d002650_P003 | Maize | nucleus | 35.96 | 28.77 |
| Zm00001d007786_P001 | Maize | nucleus | 32.41 | 28.29 |
| Zm00001d013063_P001 | Maize | nucleus | 31.19 | 27.82 |
| Zm00001d035747_P027 | Maize | endoplasmic reticulum, plastid | 35.41 | 27.76 |
| Zm00001d014875_P001 | Maize | nucleus | 32.85 | 27.43 |
| Zm00001d006351_P001 | Maize | nucleus | 31.85 | 27.26 |
| Zm00001d033206_P001 | Maize | cytosol | 28.63 | 26.71 |
| Zm00001d039440_P001 | Maize | cytosol | 7.1 | 26.23 |
| Zm00001d033518_P001 | Maize | nucleus | 33.63 | 25.53 |
| Zm00001d029573_P001 | Maize | cytosol | 28.19 | 24.61 |
| Zm00001d035554_P001 | Maize | plastid | 12.76 | 22.86 |
Protein Annotations
| MapMan:12.5.1.13 | Gene3D:2.170.260.10 | Gene3D:3.30.420.10 | Gene3D:3.40.50.2300 | UniProt:A0A1D6MQQ3 | InterPro:ArgoL1 |
| InterPro:ArgoL2 | InterPro:Argonaute_N | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0031047 | InterPro:IPR003100 | InterPro:IPR003165 |
| InterPro:IPR036397 | ProteinID:ONM31331.1 | ProteinID:ONM31337.1 | ProteinID:ONM31338.1 | ProteinID:ONM31342.1 | ProteinID:ONM31343.1 |
| InterPro:PAZ_dom | InterPro:PAZ_dom_sf | PFAM:PF02170 | PFAM:PF02171 | PFAM:PF08699 | PFAM:PF16486 |
| PFAM:PF16488 | PFscan:PS50821 | PFscan:PS50822 | PANTHER:PTHR22891 | PANTHER:PTHR22891:SF56 | InterPro:Piwi |
| InterPro:RNaseH-like_sf | InterPro:RNaseH_sf | SMART:SM00950 | SMART:SM01163 | SUPFAM:SSF101690 | SUPFAM:SSF53098 |
| UniParc:UPI000843B050 | EnsemblPlantsGene:Zm00001d040429 | EnsemblPlants:Zm00001d040429_P012 | EnsemblPlants:Zm00001d040429_T012 | SEG:seg | : |
Description
argonaute105
Coordinates
chr3:-:43101860..43117158
Molecular Weight (calculated)
100851.0 Da
IEP (calculated)
9.328
GRAVY (calculated)
-0.358
Length
901 amino acids
Sequence
(BLAST)
(BLAST)
001: MESHNGEAND LPPPPPLIAG VEPLKADETK MPLKPRSLVQ RNGFGRKGQP IKLITNHFKV SLVNAEEFFY HYYVNLKYED DTPVDRKGSG RKVIEKLQQT
101: YAAELANKDF AYDGEKSLFT IGALPQVKNE FTVVVEDFST GKTPANGSPG NDSPPGSDRK RVRRPYNTKT YKVELSFAAK IPMSAISQAL RGQESEHTQE
201: AIRVIDIILR QHSAKQGCLL VRQSFFHNNP SNFVDLGGGV VGCRGFHSSF RATQSGLSLN IDVSTTMIVK PGPVIDFLLD NQKVGDPSMI DWAKAKRALK
301: NLRIKISPAN QEQKIVGLSE RTCREQLFTL KHKNGNNGDS EEITVYDYFV KQRGIVLQYS GDLPCINVGK LKRPTYFPIE LCSLVPLQRY TKALNTLQRS
401: SLVEKSRQKP QERMSVLSDV LQRSNYDAEP MLKACGITIA RNFTEVDGRV LQPPKLKAGN GEDIFTRNGR WNFNNKRLIR ACSVEKWAVV NFSARCNVRD
501: LVRDLIKCGG MKGIMVDAPF AVFDENPSMR RSPAIRRVED MFEQVKTKLP GAPKFLLCVL AERKNSDIYG PWKKKCLAEF GIVTQCVAPT RVNDQYLTNV
601: LLKINAKLGG MNSLLQIETS PAIPLVSKVP TIILGMDVSH GSPGHSDVPS IAAVVSSREW PLISKYRASV RTQSPKMEMI DSLFKPREAE DDGLIRECLI
701: DFYTSSGKRK PDQVIIFRDG VSESQFNQVL NIELQQIIEA CKFLDEKWNP KFTLIIAQKN HHTKFFIPGK PDNVPPGTVV DNKVCHPKNF DFYMCAHAGM
801: IGTTRPTHYH ILHDEIGFSP DDLQELVHSL SYVYQRSTTA ISVVAPICYA HLAAAQVGQF IKFDEMSETS SSHGGHTSAG SVPVQELPRL HEKVRSSMFF
901: C
101: YAAELANKDF AYDGEKSLFT IGALPQVKNE FTVVVEDFST GKTPANGSPG NDSPPGSDRK RVRRPYNTKT YKVELSFAAK IPMSAISQAL RGQESEHTQE
201: AIRVIDIILR QHSAKQGCLL VRQSFFHNNP SNFVDLGGGV VGCRGFHSSF RATQSGLSLN IDVSTTMIVK PGPVIDFLLD NQKVGDPSMI DWAKAKRALK
301: NLRIKISPAN QEQKIVGLSE RTCREQLFTL KHKNGNNGDS EEITVYDYFV KQRGIVLQYS GDLPCINVGK LKRPTYFPIE LCSLVPLQRY TKALNTLQRS
401: SLVEKSRQKP QERMSVLSDV LQRSNYDAEP MLKACGITIA RNFTEVDGRV LQPPKLKAGN GEDIFTRNGR WNFNNKRLIR ACSVEKWAVV NFSARCNVRD
501: LVRDLIKCGG MKGIMVDAPF AVFDENPSMR RSPAIRRVED MFEQVKTKLP GAPKFLLCVL AERKNSDIYG PWKKKCLAEF GIVTQCVAPT RVNDQYLTNV
601: LLKINAKLGG MNSLLQIETS PAIPLVSKVP TIILGMDVSH GSPGHSDVPS IAAVVSSREW PLISKYRASV RTQSPKMEMI DSLFKPREAE DDGLIRECLI
701: DFYTSSGKRK PDQVIIFRDG VSESQFNQVL NIELQQIIEA CKFLDEKWNP KFTLIIAQKN HHTKFFIPGK PDNVPPGTVV DNKVCHPKNF DFYMCAHAGM
801: IGTTRPTHYH ILHDEIGFSP DDLQELVHSL SYVYQRSTTA ISVVAPICYA HLAAAQVGQF IKFDEMSETS SSHGGHTSAG SVPVQELPRL HEKVRSSMFF
901: C
001: MDSTNGNGAD LESANGANGS GVTEALPPPP PVIPPNVEPV RVKTELAEKK GPVRVPMARK GFGTRGQKIP LLTNHFKVDV ANLQGHFFHY SVALFYDDGR
101: PVEQKGVGRK ILDKVHQTYH SDLDGKEFAY DGEKTLFTYG ALPSNKMDFS VVLEEVSATR ANGNGSPNGN ESPSDGDRKR LRRPNRSKNF RVEISYAAKI
201: PLQALANAMR GQESENSQEA IRVLDIILRQ HAARQGCLLV RQSFFHNDPT NCEPVGGNIL GCRGFHSSFR TTQGGMSLNM DVTTTMIIKP GPVVDFLIAN
301: QNARDPYSID WSKAKRTLKN LRVKVSPSGQ EFKITGLSDK PCREQTFELK KRNPNENGEF ETTEVTVADY FRDTRHIDLQ YSADLPCINV GKPKRPTYIP
401: LELCALVPLQ RYTKALTTFQ RSALVEKSRQ KPQERMTVLS KALKVSNYDA EPLLRSCGIS ISSNFTQVEG RVLPAPKLKM GCGSETFPRN GRWNFNNKEF
501: VEPTKIQRWV VVNFSARCNV RQVVDDLIKI GGSKGIEIAS PFQVFEEGNQ FRRAPPMIRV ENMFKDIQSK LPGVPQFILC VLPDKKNSDL YGPWKKKNLT
601: EFGIVTQCMA PTRQPNDQYL TNLLLKINAK LGGLNSMLSV ERTPAFTVIS KVPTIILGMD VSHGSPGQSD VPSIAAVVSS REWPLISKYR ASVRTQPSKA
701: EMIESLVKKN GTEDDGIIKE LLVDFYTSSN KRKPEHIIIF RDGVSESQFN QVLNIELDQI IEACKLLDAN WNPKFLLLVA QKNHHTKFFQ PTSPENVPPG
801: TIIDNKICHP KNNDFYLCAH AGMIGTTRPT HYHVLYDEIG FSADELQELV HSLSYVYQRS TSAISVVAPI CYAHLAAAQL GTFMKFEDQS ETSSSHGGIT
901: APGPISVAQL PRLKDNVANS MFFC
101: PVEQKGVGRK ILDKVHQTYH SDLDGKEFAY DGEKTLFTYG ALPSNKMDFS VVLEEVSATR ANGNGSPNGN ESPSDGDRKR LRRPNRSKNF RVEISYAAKI
201: PLQALANAMR GQESENSQEA IRVLDIILRQ HAARQGCLLV RQSFFHNDPT NCEPVGGNIL GCRGFHSSFR TTQGGMSLNM DVTTTMIIKP GPVVDFLIAN
301: QNARDPYSID WSKAKRTLKN LRVKVSPSGQ EFKITGLSDK PCREQTFELK KRNPNENGEF ETTEVTVADY FRDTRHIDLQ YSADLPCINV GKPKRPTYIP
401: LELCALVPLQ RYTKALTTFQ RSALVEKSRQ KPQERMTVLS KALKVSNYDA EPLLRSCGIS ISSNFTQVEG RVLPAPKLKM GCGSETFPRN GRWNFNNKEF
501: VEPTKIQRWV VVNFSARCNV RQVVDDLIKI GGSKGIEIAS PFQVFEEGNQ FRRAPPMIRV ENMFKDIQSK LPGVPQFILC VLPDKKNSDL YGPWKKKNLT
601: EFGIVTQCMA PTRQPNDQYL TNLLLKINAK LGGLNSMLSV ERTPAFTVIS KVPTIILGMD VSHGSPGQSD VPSIAAVVSS REWPLISKYR ASVRTQPSKA
701: EMIESLVKKN GTEDDGIIKE LLVDFYTSSN KRKPEHIIIF RDGVSESQFN QVLNIELDQI IEACKLLDAN WNPKFLLLVA QKNHHTKFFQ PTSPENVPPG
801: TIIDNKICHP KNNDFYLCAH AGMIGTTRPT HYHVLYDEIG FSADELQELV HSLSYVYQRS TSAISVVAPI CYAHLAAAQL GTFMKFEDQS ETSSSHGGIT
901: APGPISVAQL PRLKDNVANS MFFC
Arabidopsis Description
AGO4Protein argonaute 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVD5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.