Factsheet for Zm00001d018436_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d005045_P001	Maize	cytosol, nucleus, peroxisome, plastid	72.95	38.53
Zm00001d026146_P001	Maize	nucleus	40.98	34.25
Zm00001d015926_P001	Maize	nucleus	62.3	33.78
Zm00001d036886_P001	Maize	plastid	50.82	27.43
Zm00001d039440_P001	Maize	cytosol	50.0	25.0
Zm00001d032611_P002	Maize	vacuole	57.38	18.82
Zm00001d025691_P001	Maize	mitochondrion	27.87	17.44
Zm00001d025073_P001	Maize	cytosol	49.18	15.46
Zm00001d009158_P003	Maize	golgi	53.28	14.87
Zm00001d025331_P002	Maize	cytosol	60.66	13.41
Zm00001d035554_P001	Maize	plastid	54.92	13.32
HORVU2Hr1G031130.2	Barley	cytosol, nucleus	65.57	9.49
Zm00001d007786_P001	Maize	nucleus	79.51	9.4
VIT_08s0007g04360.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	61.48	8.81
Zm00001d013063_P001	Maize	nucleus	72.13	8.71
CDX71410	Canola	nucleus	63.11	8.09
CDY04517	Canola	plastid	63.11	8.05
Bra011993.1-P	Field mustard	plastid	63.11	7.97
VIT_06s0061g01040.t01	Wine grape	mitochondrion, nucleus	66.39	7.85
TraesCS2D01G176500.1	Wheat	golgi, unclear	66.39	7.81
KRH25139	Soybean	plastid	61.48	7.8
Zm00001d036917_P009	Maize	nucleus	61.48	7.76
AT2G27880.1	Thale cress	cytosol, nucleus, plastid	63.11	7.72
TraesCS2A01G168900.1	Wheat	cytosol	65.57	7.71
TraesCS2B01G195200.2	Wheat	nucleus	63.11	7.64
Zm00001d046438_P003	Maize	cytosol	62.3	7.56
Solyc06g074730.2.1	Tomato	nucleus	61.48	7.42
PGSC0003DMT400018363	Potato	cytosol, nucleus, plastid	62.3	7.41
Os07t0188000-01	Rice	nucleus	63.93	7.41
Zm00001d013542_P003	Maize	nucleus	62.3	7.2
KRH30536	Soybean	plastid	51.64	7.08
Zm00001d026111_P014	Maize	nucleus	61.48	6.85
Zm00001d011096_P059	Maize	nucleus	60.66	6.68
Zm00001d002650_P003	Maize	nucleus	61.48	6.66
Zm00001d033518_P001	Maize	nucleus	64.75	6.66
Zm00001d035747_P027	Maize	endoplasmic reticulum, plastid	61.48	6.53
Zm00001d014875_P001	Maize	nucleus	55.74	6.3
Zm00001d021345_P001	Maize	nucleus	45.08	5.92
Zm00001d033206_P001	Maize	cytosol	45.08	5.69
Zm00001d006351_P001	Maize	nucleus	48.36	5.6
Zm00001d029573_P001	Maize	cytosol	44.26	5.23
Zm00001d008249_P012	Maize	nucleus	37.7	5.11
Zm00001d002316_P003	Maize	plastid	35.25	5.02
Zm00001d019905_P003	Maize	nucleus	37.7	4.99
Zm00001d040429_P012	Maize	nucleus	36.89	4.99
Zm00001d026300_P001	Maize	nucleus	36.07	4.99
Zm00001d039214_P025	Maize	nucleus	34.43	4.55
Zm00001d037833_P001	Maize	mitochondrion	0.0	0.0
Zm00001d044183_P001	Maize	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:Zm00001d018436_P001	EnsemblPlants:Zm00001d018436_T001	EnsemblPlantsGene:Zm00001d018436	Gene3D:3.30.420.10	GO:GO:0003674	GO:GO:0003676
GO:GO:0005488	InterPro:IPR003165	InterPro:IPR036397	InterPro:Piwi	InterPro:RNaseH-like_sf	InterPro:RNaseH_sf
PANTHER:PTHR22891	PANTHER:PTHR22891:SF24	PFAM:PF02171	PFscan:PS50822	ProteinID:AQK75975.1	SUPFAM:SSF53098
UniParc:UPI0008DB341F	UniProt:A0A1D6HNX1	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr5:+:220842394..220843750

Molecular Weight (calculated)

13917.9 Da

IEP (calculated)

8.213

GRAVY (calculated)

0.091

Length

122 amino acids

Sequence
(BLAST)

001: MDAIRKAYAS LEDGYLPPVT FVIIQKRHHT RLFPGVHGRR DVTDRSGNIL PGSVVDTEIC HPREFDFYLC SHAGIQILTN SLCYTYARCT RAVSVGKSIC
101: QFHQVLCVIS QVYCCFISYW LQ

Best Arabidopsis Sequence Match ( AT5G43810.1 )
(BLAST)

001: MPIRQMKDSS ETHLVIKTQP LKHHNPKTVQ NGKIPPPSPS PVTVTTPATV TQSQASSPSP PSKNRSRRRN RGGRKSDQGD VCMRPSSRPR KPPPPSQTTS
101: SAVSVATAGE IVAVNHQMQM GVRKNSNFAP RPGFGTLGTK CIVKANHFLA DLPTKDLNQY DVTITPEVSS KSVNRAIIAE LVRLYKESDL GRRLPAYDGR
201: KSLYTAGELP FTWKEFSVKI VDEDDGIING PKRERSYKVA IKFVARANMH HLGEFLAGKR ADCPQEAVQI LDIVLRELSV KRFCPVGRSF FSPDIKTPQR
301: LGEGLESWCG FYQSIRPTQM GLSLNIDMAS AAFIEPLPVI EFVAQLLGKD VLSKPLSDSD RVKIKKGLRG VKVEVTHRAN VRRKYRVAGL TTQPTRELMF
401: PVDENCTMKS VIEYFQEMYG FTIQHTHLPC LQVGNQKKAS YLPMEACKIV EGQRYTKRLN EKQITALLKV TCQRPRDREN DILRTVQHNA YDQDPYAKEF
501: GMNISEKLAS VEARILPAPW LKYHENGKEK DCLPQVGQWN MMNKKMINGM TVSRWACVNF SRSVQENVAR GFCNELGQMC EVSGMEFNPE PVIPIYSARP
601: DQVEKALKHV YHTSMNKTKG KELELLLAIL PDNNGSLYGD LKRICETELG LISQCCLTKH VFKISKQYLA NVSLKINVKM GGRNTVLVDA ISCRIPLVSD
701: IPTIIFGADV THPENGEESS PSIAAVVASQ DWPEVTKYAG LVCAQAHRQE LIQDLYKTWQ DPVRGTVSGG MIRDLLISFR KATGQKPLRI IFYRDGVSEG
801: QFYQVLLYEL DAIRKACASL EPNYQPPVTF IVVQKRHHTR LFANNHRDKN STDRSGNILP GTVVDTKICH PTEFDFYLCS HAGIQGTSRP AHYHVLWDEN
901: NFTADGIQSL TNNLCYTYAR CTRSVSIVPP AYYAHLAAFR ARFYLEPEIM QDNGSPGKKN TKTTTVGDVG VKPLPALKEN VKRVMFYC

Arabidopsis Description

AGO10Protein argonaute 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9XGW1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.