Factsheet for VIT_08s0007g04360.t01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 6
plasma membrane 5
golgi 6
plastid 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi, vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d015926_P001	Maize	nucleus	16.69	63.11
Zm00001d018436_P001	Maize	cytosol	8.81	61.48
Zm00001d005045_P001	Maize	cytosol, nucleus, peroxisome, plastid	15.86	58.44
TraesCS4B01G026600.1	Wheat	cytosol	33.26	58.35
TraesCS4D01G024300.1	Wheat	cytosol	35.14	54.36
OQU91198	Sorghum	nucleus	47.36	54.24
TraesCS5A01G446000.1	Wheat	cytosol	53.94	54.06
EER90726	Sorghum	cytosol	53.47	53.59
TraesCS4A01G288300.1	Wheat	plastid	52.41	52.04
TraesCS4D01G024100.1	Wheat	plastid	52.29	51.93
HORVU2Hr1G031130.2	Barley	cytosol, nucleus	51.0	51.48
Os03t0789466-00	Rice	cytosol, mitochondrion, nucleus	27.5	51.2
Zm00001d032611_P002	Maize	vacuole	22.33	51.08
TraesCS5D01G454600.1	Wheat	cytosol	44.42	51.01
TraesCS5B01G468000.1	Wheat	plastid	52.29	50.97
TraesCS4A01G288000.1	Wheat	cytosol	42.89	50.91
TraesCS5B01G454200.1	Wheat	cytosol	40.07	50.52
OQU88608	Sorghum	plastid	52.17	50.4
Os03t0682600-00	Rice	nucleus	43.83	49.93
OQU91197	Sorghum	plastid	51.35	49.43
Zm00001d025691_P001	Maize	mitochondrion	11.28	49.23
TraesCS3B01G287600.1	Wheat	nucleus	51.94	48.79
VIT_19s0014g01840.t01	Wine grape	cytosol, nucleus, plastid	44.54	48.78
VIT_11s0016g04620.t01	Wine grape	cytosol	51.47	48.4
VIT_06s0061g01040.t01	Wine grape	mitochondrion, nucleus	58.28	48.06
Zm00001d036886_P001	Maize	plastid	12.57	47.35
TraesCS5B01G452500.1	Wheat	nucleus	49.82	46.49
Zm00001d009158_P003	Maize	golgi	23.38	45.54
Os03t0800200-01	Rice	plasma membrane	56.17	45.18
VIT_05s0020g04190.t01	Wine grape	nucleus	46.53	45.1
TraesCS5D01G454200.1	Wheat	cytosol, nucleus, plastid	54.64	44.16
TraesCS5B01G455700.1	Wheat	cytosol, mitochondrion, plastid	51.0	44.06
Solyc06g074730.2.1	Tomato	nucleus	52.29	44.02
PGSC0003DMT400018363	Potato	cytosol, nucleus, plastid	52.88	43.9
TraesCS5B01G451400.2	Wheat	plastid	54.64	43.87
TraesCS7D01G061600.1	Wheat	cytosol, mitochondrion, nucleus, plastid	27.03	43.64
GSMUA_Achr4P17670_001	Banana	extracellular, plasma membrane	18.21	43.18
TraesCS2B01G195200.2	Wheat	nucleus	50.53	42.66
VIT_17s0053g00680.t01	Wine grape	nucleus	54.29	42.58
TraesCS2A01G168900.1	Wheat	cytosol	51.82	42.53
TraesCS4B01G024000.1	Wheat	nucleus	51.12	42.48
Zm00001d013542_P003	Maize	nucleus	52.64	42.46
TraesCS2D01G176500.1	Wheat	golgi, unclear	51.59	42.33
HORVU4Hr1G004030.1	Barley	mitochondrion	51.35	42.3
Zm00001d013063_P001	Maize	nucleus	50.06	42.18
TraesCS7A01G067500.2	Wheat	cytosol	42.19	42.04
Os07t0188000-01	Rice	nucleus	51.7	41.83
Zm00001d007786_P001	Maize	nucleus	49.94	41.18
TraesCS5B01G458100.1	Wheat	cytosol	41.72	37.37
GSMUA_Achr6P04510_001	Banana	nucleus	53.7	36.94
Zm00001d033518_P001	Maize	nucleus	51.35	36.82
Os02t0616300-00	Rice	vacuole	13.4	34.44
Zm00001d039440_P001	Maize	cytosol	9.87	34.43
HORVU2Hr1G045050.1	Barley	cytosol, mitochondrion, plastid	8.23	34.31
VIT_06s0009g01200.t01	Wine grape	nucleus	35.25	32.86
TraesCS5D01G192700.2	Wheat	nucleus	35.02	31.6
VIT_12s0059g01430.t01	Wine grape	nucleus	34.08	31.52
VIT_01s0113g00500.t01	Wine grape	nucleus	36.08	30.61
VIT_13s0175g00140.t01	Wine grape	nucleus	31.73	30.51
VIT_08s0040g00070.t01	Wine grape	nucleus	32.9	30.5
VIT_03s0038g00830.t01	Wine grape	nucleus	35.84	30.47
VIT_10s0042g01180.t01	Wine grape	nucleus, plastid	32.9	29.54
VIT_10s0042g01150.t01	Wine grape	nucleus	33.26	28.91
Zm00001d035554_P001	Maize	plastid	16.45	27.83
EER93271	Sorghum	cytosol	32.67	27.47
VIT_10s0042g01200.t01	Wine grape	nucleus	31.37	26.86
Os03t0789500-01	Rice	cytosol	0.59	2.2

Protein Annotations

EntrezGene:100250362	wikigene:100250362	Gene3D:2.170.260.10	Gene3D:3.30.420.10	Gene3D:3.40.50.2300	MapMan:35.1
InterPro:ArgoL1	InterPro:ArgoL2	InterPro:Argonaute_N	ProteinID:CBI30202	ProteinID:CBI30202.3	UniProt:D7TIX6
EMBL:FN595991	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488	GO:GO:0005515	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0031047	InterPro:IPR003100	InterPro:IPR003165	InterPro:IPR036397
EntrezGene:LOC100250362	wikigene:LOC100250362	InterPro:PAZ_dom	InterPro:PAZ_dom_sf	PFAM:PF02170	PFAM:PF02171
PFAM:PF08699	PFAM:PF16486	PFAM:PF16488	PFscan:PS50821	PFscan:PS50822	PANTHER:PTHR22891
PANTHER:PTHR22891:SF63	InterPro:Piwi	InterPro:RNaseH-like_sf	InterPro:RNaseH_sf	SMART:SM00949	SMART:SM00950
SMART:SM01163	SUPFAM:SSF101690	SUPFAM:SSF53098	TMHMM:TMhelix	UniParc:UPI0001BE37DF	ArrayExpress:VIT_08s0007g04360
EnsemblPlantsGene:VIT_08s0007g04360	EnsemblPlants:VIT_08s0007g04360.t01	RefSeq:XP_002264527	RefSeq:XP_002264527.2	SEG:seg	:

Description

No Description!

Coordinates

chr8:+:18308666..18314201

Molecular Weight (calculated)

97034.5 Da

IEP (calculated)

8.741

GRAVY (calculated)

-0.208

Length

851 amino acids

Sequence
(BLAST)

001: MPFCISFLSF VFPFFLWASL KVPYSLFYFA LFISSFKWLD VVSITPEVTS RVLSRSLIKE LVHLYGQSHL YRNPAYDGRR GIYTAGPLPF TSKEFMIKLE
101: EGNDGTHERK KKEFIVKIRF ATSTDIHNLR EFLLSRQSNV PYEIIHALDV VLKDSLSNNR CTLSGKTFFP LGLGARSEIG NGVQCWNGFY QSLRPTQMGL
201: SLNIDVSSKS FYEPIPVIEF AAKFLNLEDP SIMARMPLSN DDRLKLKKVL KGIKVEVTHG GQRRYKIFDI TEQPTNQLRF TEDGQQKSVI QYFREKYNIV
301: LRYASWPSLR SGKDSRPIYL PMETCTIVAG QRYAKKLNER QVASMLRMTC QRPWRRQEII HQIADQDDYI RNDFVKEFGV NVSVDMAAID ARVLPPPALK
401: YHDSGREKTI RPRTGQWNAQ HVKLYHGAVV EYWMCVNFSN LKQEVVFNFC QHLVDMCCRK GMDFARNPLF PIQSSPPGQI EAKLSDVHHQ CRVEGKQLQM
501: LIIILPEVNA YYGKIKRICE TELGMVSQCC QPRHARTCNR IYLENIVLKI NVKAGGQNAI LEDTLYGRIP LLTDIPTIIF GADVTHPQSG EDQGPSIAAV
601: VASMDWPTVV TYRGLVSAQP HRSEIIEDLF RVKEDPKRGV VHAGMIRELL LAFKSSTGLK PLRIIFFRDG VSEGMFEMVL LKEMDAIRKA CASLEEGYLP
701: PVTFIVVQKR HNTRLFPTNE DNMDKSGNIL PGTVVDTVIC HPSEHDFYLC SHAGIRGTSR PAHYRVLLDE NKFSADALQM LANDLCYTYA RCTRSVSIVP
801: PVYYAHLAAF RAKFYVERSG AQYEGGSSTG PDDRIELPEI DPTVKSVMFY C

Best Arabidopsis Sequence Match ( AT2G27880.1 )
(BLAST)

001: MSNRGGGGHG GASRGRGGGR RSDQRQDQSS GQVAWPGLQQ SYGGRGGSVS AGRGRGNVGR GENTGDLTAT QVPVASAVSG GRGRGNIGDP TFSVASSSKT
101: VSVASSSKEE SKNTEVSETM SNLQITSTET KPEMTSLPPA SSKAVTFPVR PGRGTLGKKV MVRANHFLVQ VADRDLYHYD VSINPEVISK TVNRNVMKLL
201: VKNYKDSHLG GKSPAYDGRK SLYTAGPLPF DSKEFVVNLA EKRADGSSGK DRPFKVAVKN VTSTDLYQLQ QFLDRKQREA PYDTIQVLDV VLRDKPSNDY
301: VSVGRSFFHT SLGKDARDGR GELGDGIEYW RGYFQSLRLT QMGLSLNIDV SARSFYEPIV VTDFISKFLN IRDLNRPLRD SDRLKVKKVL RTLKVKLLHW
401: NGTKSAKISG ISSLPIRELR FTLEDKSEKT VVQYFAEKYN YRVKYQALPA IQTGSDTRPV YLPMELCQID EGQRYTKRLN EKQVTALLKA TCQRPPDREN
501: SIKNLVVKNN YNDDLSKEFG MSVTTQLASI EARVLPPPML KYHDSGKEKM VNPRLGQWNM IDKKMVNGAK VTSWTCVSFS TRIDRGLPQE FCKQLIGMCV
601: SKGMEFKPQP AIPFISCPPE HIEEALLDIH KRAPGLQLLI VILPDVTGSY GKIKRICETE LGIVSQCCQP RQVNKLNKQY MENVALKINV KTGGRNTVLN
701: DAIRRNIPLI TDRPTIIMGA DVTHPQPGED SSPSIAAVVA SMDWPEINKY RGLVSAQAHR EEIIQDLYKL VQDPQRGLVH SGLIREHFIA FRRATGQIPQ
801: RIIFYRDGVS EGQFSQVLLH EMTAIRKACN SLQENYVPRV TFVIVQKRHH TRLFPEQHGN RDMTDKSGNI QPGTVVDTKI CHPNEFDFYL NSHAGIQGTS
901: RPAHYHVLLD ENGFTADQLQ MLTNNLCYTY ARCTKSVSIV PPAYYAHLAA FRARYYMESE MSDGGSSRSR SSTTGVGQVI SQLPAIKDNV KEVMFYC

Arabidopsis Description

AGO5Protein argonaute 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJK3]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.