Factsheet for GSMUA_Achr6P04510_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G026600.1	Wheat	cytosol	27.32	69.69
TraesCS4D01G024100.1	Wheat	plastid	46.56	67.21
TraesCS4A01G288300.1	Wheat	plastid	46.16	66.63
TraesCS5B01G468000.1	Wheat	plastid	46.48	65.86
OQU91198	Sorghum	nucleus	39.05	65.01
GSMUA_AchrUn_...	Banana	cytosol	10.19	64.29
TraesCS4D01G024300.1	Wheat	cytosol	28.46	64.0
TraesCS4A01G288000.1	Wheat	cytosol	35.97	62.06
GSMUA_Achr7P04100_001	Banana	extracellular	12.21	60.89
OQU91197	Sorghum	plastid	43.09	60.29
HORVU2Hr1G045050.1	Barley	cytosol, mitochondrion, plastid	9.78	59.31
Os03t0682600-00	Rice	nucleus	35.25	58.37
VIT_06s0061g01040.t01	Wine grape	mitochondrion, nucleus	47.7	57.17
CDX71410	Canola	nucleus	43.41	56.41
KRH25139	Soybean	plastid	43.49	55.98
CDY04517	Canola	plastid	43.09	55.69
KRH30536	Soybean	plastid	40.02	55.62
Bra011993.1-P	Field mustard	plastid	43.33	55.49
TraesCS4B01G024000.1	Wheat	nucleus	45.92	55.47
GSMUA_Achr4P30720_001	Banana	nucleus	41.55	55.09
HORVU4Hr1G004030.1	Barley	mitochondrion	45.76	54.79
GSMUA_Achr6P05310_001	Banana	nucleus	40.91	54.53
Zm00001d013542_P003	Maize	nucleus	46.24	54.22
VIT_08s0007g04360.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	36.94	53.7
AT2G27880.1	Thale cress	cytosol, nucleus, plastid	42.52	52.76
GSMUA_Achr7P13220_001	Banana	cytosol	40.34	52.75
GSMUA_Achr1P17950_001	Banana	nucleus	44.46	52.13
GSMUA_Achr3P13970_001	Banana	nucleus	44.46	51.89
GSMUA_Achr4P17670_001	Banana	extracellular, plasma membrane	14.79	50.97
Solyc06g074730.2.1	Tomato	nucleus	41.55	50.84
GSMUA_Achr1P07120_001	Banana	cytosol	43.25	50.61
GSMUA_Achr3P27070_001	Banana	nucleus	43.9	50.46
PGSC0003DMT400018363	Potato	cytosol, nucleus, plastid	41.63	50.24
GSMUA_AchrUn_...	Banana	mitochondrion	43.01	50.0
Zm00001d033518_P001	Maize	nucleus	45.35	47.26
GSMUA_AchrUn_...	Banana	cytosol	11.48	46.71
GSMUA_Achr7P26400_001	Banana	cytosol	18.92	36.73
GSMUA_Achr9P05150_001	Banana	nucleus	25.87	34.97
GSMUA_Achr9P22630_001	Banana	nucleus	24.49	33.82
GSMUA_Achr9P27810_001	Banana	plastid	22.23	31.57

Protein Annotations

MapMan:15.5.1.3	Gene3D:2.170.260.10	Gene3D:3.30.420.10	Gene3D:3.30.50.10	Gene3D:3.40.50.2300	InterPro:ArgoL1
InterPro:ArgoL2	InterPro:Argonaute_Mid_dom	InterPro:Argonaute_N	InterPro:CCT_domain	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005829	GO:GO:0006139	GO:GO:0006355
GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009058	GO:GO:0009605
GO:GO:0009607	GO:GO:0009615	GO:GO:0009814	GO:GO:0009987	GO:GO:0031047	GO:GO:0040029
GO:GO:0043565	GO:GO:0060145	EnsemblPlantsGene:GSMUA_Achr6G04510_001	EnsemblPlants:GSMUA_Achr6P04510_001	EnsemblPlants:GSMUA_Achr6T04510_001	InterPro:IPR000679
InterPro:IPR003100	InterPro:IPR003165	InterPro:IPR010399	InterPro:IPR010402	InterPro:IPR013088	InterPro:IPR036397
UniProt:M0T449	InterPro:PAZ_dom	InterPro:PAZ_dom_sf	PFAM:PF00320	PFAM:PF02170	PFAM:PF02171
PFAM:PF06200	PFAM:PF06203	PFAM:PF08699	PFAM:PF16486	PFAM:PF16487	PFAM:PF16488
ScanProsite:PS00344	PFscan:PS50821	PFscan:PS50822	PFscan:PS51017	PFscan:PS51320	PANTHER:PTHR22891
PANTHER:PTHR22891:SF24	InterPro:Piwi	InterPro:RNaseH-like_sf	InterPro:RNaseH_sf	SMART:SM00401	SMART:SM00949
SMART:SM00950	SMART:SM00979	SMART:SM01163	SUPFAM:SSF101690	SUPFAM:SSF53098	SUPFAM:SSF57716
InterPro:Tify_dom	UniParc:UPI000295224D	InterPro:Znf_GATA	InterPro:Znf_NHR/GATA	SEG:seg	:

Description

Protein argonaute MEL1 [Source:GMGC_GENE;Acc:GSMUA_Achr6G04510_001]

Coordinates

chr6:+:3088655..3104476

Molecular Weight (calculated)

137561.0 Da

IEP (calculated)

8.627

GRAVY (calculated)

-0.407

Length

1237 amino acids

Sequence
(BLAST)

0001: MSSNANPEDL GMYGHDDAAV DASGGQGAIE GATGGEKMGV SLIPTSDQDH LAEAMDAAAP LMSVTSNQLT LLFQGEVYVF DSVSPEKVQA VLLLLGGCEV
0101: PTGAAGMTLS GQQDDRGYDD LLHRTNIPAK RIASLIRFRE KRKERNFDKK IRYNVRKEVA LRMQRRKGQF AGKAITQEGA LASSSGDPLQ SSIQEDPPRE
0201: SKCQNCGISE KMTPAMRRGP AGPRSLCNAC GLMWANKGTL RSPSRAKIGT PSTANPSEHG QAIDSELISD NKLHVHTPSN HDAVVSNSEI VGDGTTADVQ
0301: QADTVGLKTE LRERAPPPTT SYYSPPADVP SSSAAAAAGT SSTSLSQELE QRLTIRDPEP AAAEPEATLT QSTPASSKAL RPPARPGFGK AGVTCIVRAN
0401: HFLVEVADKS ICHYDVAISP ECTSRITNRR IITELVRMHK NGVLGNRLPV YDGRKSLYTA GPLPFTDKAF VIKLADEEKT DKTREKEFKV TIKLAGQADL
0501: DHLRNFLQGR QMDAPQETIQ ALDIVLRESP SANYVTSSRS FFSPMFGHKC DIGEGLECWR GYFQSLRPTQ MGLSLNTDIS ATSFYKPVTV VEFVAEYLNI
0601: YDIMRPLSDP DRIKIKKALR GIKVEAMHNR NCRRRYKITG ITSMPMSEIM FPVDESGTKL SVVQYFRDRY QCSLKHVSWP CLQAGSDARP TYLPMEVCRI
0701: IEGQRFTKKL NDRQVTSILK ATCQRPRDRE RSILEMVRLN KFNDDKFVKE FGIRIKNEFT PVEARVLPPP RLKYHESGRE KLCSPNVGQW NMINKRMVNG
0801: GNVEHWTCLS FSRLRGDEID RFCGGLVNMC NNIGMVFNPR PFVDIWAVHP DSMETALRKV HSQSLNCLGK SGRHIQLLII VLPEKSGHYG RIKRICETDL
0901: GIVSQCCLPK HVAKCNNQYL ENVALKINVK VGGRNTVLED ALHYRIPFVT DKPTIIFGAD VTHPAPGEDA SSIAAVVASI DWPEVTKYKG LVSAQQNREE
1001: MIQDLFKVTQ DPQKGTIYGG MIRELLLSFF RATKQKPHRI IFYRDGVSEG QFSQVLLHEM TAIRKACASL EEGYLPPTTF VVVQKRHHTR LFPEVHGSRD
1101: LTDRSGNILP GTVVDKMICH PTEFDFFLCS HAGIQGTSRP THYHVLFDEN HFSADDLQRL TNNLCYTYAR CTRSVSIVPP AYYAHLAAFR ARYYMEGELS
1201: DGGSTSAGGR SRSKNTSTEV RQLPLIKHNV QEVMFYC

Best Arabidopsis Sequence Match ( AT2G27880.1 )
(BLAST)

001: MSNRGGGGHG GASRGRGGGR RSDQRQDQSS GQVAWPGLQQ SYGGRGGSVS AGRGRGNVGR GENTGDLTAT QVPVASAVSG GRGRGNIGDP TFSVASSSKT
101: VSVASSSKEE SKNTEVSETM SNLQITSTET KPEMTSLPPA SSKAVTFPVR PGRGTLGKKV MVRANHFLVQ VADRDLYHYD VSINPEVISK TVNRNVMKLL
201: VKNYKDSHLG GKSPAYDGRK SLYTAGPLPF DSKEFVVNLA EKRADGSSGK DRPFKVAVKN VTSTDLYQLQ QFLDRKQREA PYDTIQVLDV VLRDKPSNDY
301: VSVGRSFFHT SLGKDARDGR GELGDGIEYW RGYFQSLRLT QMGLSLNIDV SARSFYEPIV VTDFISKFLN IRDLNRPLRD SDRLKVKKVL RTLKVKLLHW
401: NGTKSAKISG ISSLPIRELR FTLEDKSEKT VVQYFAEKYN YRVKYQALPA IQTGSDTRPV YLPMELCQID EGQRYTKRLN EKQVTALLKA TCQRPPDREN
501: SIKNLVVKNN YNDDLSKEFG MSVTTQLASI EARVLPPPML KYHDSGKEKM VNPRLGQWNM IDKKMVNGAK VTSWTCVSFS TRIDRGLPQE FCKQLIGMCV
601: SKGMEFKPQP AIPFISCPPE HIEEALLDIH KRAPGLQLLI VILPDVTGSY GKIKRICETE LGIVSQCCQP RQVNKLNKQY MENVALKINV KTGGRNTVLN
701: DAIRRNIPLI TDRPTIIMGA DVTHPQPGED SSPSIAAVVA SMDWPEINKY RGLVSAQAHR EEIIQDLYKL VQDPQRGLVH SGLIREHFIA FRRATGQIPQ
801: RIIFYRDGVS EGQFSQVLLH EMTAIRKACN SLQENYVPRV TFVIVQKRHH TRLFPEQHGN RDMTDKSGNI QPGTVVDTKI CHPNEFDFYL NSHAGIQGTS
901: RPAHYHVLLD ENGFTADQLQ MLTNNLCYTY ARCTKSVSIV PPAYYAHLAA FRARYYMESE MSDGGSSRSR SSTTGVGQVI SQLPAIKDNV KEVMFYC

Arabidopsis Description

AGO5Protein argonaute 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJK3]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.