CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
nucleus 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH30536	Soybean	plastid	79.92	86.29
Zm00001d015926_P001	Maize	nucleus	15.92	68.0
KRG99173	Soybean	cytosol	10.72	66.03
Zm00001d005045_P001	Maize	cytosol, nucleus, peroxisome, plastid	14.88	61.9
TraesCS4B01G026600.1	Wheat	cytosol	31.22	61.86
Zm00001d018436_P001	Maize	cytosol	7.8	61.48
EER90726	Sorghum	cytosol	53.8	60.9
TraesCS5A01G446000.1	Wheat	cytosol	52.76	59.72
VIT_06s0061g01040.t01	Wine grape	mitochondrion, nucleus	63.79	59.4
TraesCS4D01G024300.1	Wheat	cytosol	33.82	59.09
CDY04517	Canola	plastid	58.79	59.04
CDX71410	Canola	nucleus	58.38	58.93
OQU91198	Sorghum	nucleus	45.27	58.55
Bra011993.1-P	Field mustard	plastid	58.79	58.49
TraesCS4D01G024100.1	Wheat	plastid	51.51	57.76
TraesCS4A01G288300.1	Wheat	plastid	51.4	57.64
OQU88608	Sorghum	plastid	52.45	57.21
HORVU2Hr1G031130.2	Barley	cytosol, nucleus	49.84	56.82
TraesCS5B01G468000.1	Wheat	plastid	51.61	56.82
AT2G27880.1	Thale cress	cytosol, nucleus, plastid	58.27	56.17
OQU91197	Sorghum	plastid	51.2	55.66
TraesCS4A01G288000.1	Wheat	cytosol	41.42	55.51
TraesCS3B01G287600.1	Wheat	nucleus	51.4	54.53
TraesCS5B01G454200.1	Wheat	cytosol	38.09	54.22
TraesCS5D01G454600.1	Wheat	cytosol	41.73	54.12
Zm00001d032611_P002	Maize	vacuole	20.92	54.03
Os03t0789466-00	Rice	cytosol, mitochondrion, nucleus	25.29	53.17
KRH03770	Soybean	nucleus	49.22	52.38
KRH63036	Soybean	cytosol	49.53	52.37
KRH56656	Soybean	cytosol	49.43	52.31
Zm00001d036886_P001	Maize	plastid	12.28	52.21
KRH54842	Soybean	nucleus	49.32	52.15
Os03t0682600-00	Rice	nucleus	40.48	52.08
KRH31645	Soybean	nucleus	51.3	51.95
Os03t0800200-01	Rice	plasma membrane	57.02	51.8
Zm00001d025691_P001	Maize	mitochondrion	10.51	51.79
PGSC0003DMT400018363	Potato	cytosol, nucleus, plastid	54.73	51.32
TraesCS5B01G452500.1	Wheat	nucleus	48.6	51.21
KRH69078	Soybean	cytosol	51.61	51.03
Solyc06g074730.2.1	Tomato	nucleus	53.59	50.94
KRH35431	Soybean	cytosol	51.51	50.82
TraesCS5D01G454200.1	Wheat	cytosol, nucleus, plastid	55.57	50.71
KRG91384	Soybean	cytosol	51.3	50.62
TraesCS2B01G195200.2	Wheat	nucleus	52.97	50.5
TraesCS2D01G176500.1	Wheat	golgi, unclear	54.42	50.43
TraesCS5B01G451400.2	Wheat	plastid	55.46	50.28
TraesCS2A01G168900.1	Wheat	cytosol	54.11	50.14
KRH09472	Soybean	nucleus	54.73	49.95
TraesCS5B01G455700.1	Wheat	cytosol, mitochondrion, plastid	51.09	49.85
KRH38925	Soybean	endoplasmic reticulum	54.63	49.62
HORVU2Hr1G045050.1	Barley	cytosol, mitochondrion, plastid	10.51	49.51
Zm00001d009158_P003	Maize	golgi	22.27	48.97
Zm00001d013063_P001	Maize	nucleus	51.2	48.71
TraesCS4B01G024000.1	Wheat	nucleus	51.72	48.54
HORVU4Hr1G004030.1	Barley	mitochondrion	51.4	47.82
Os07t0188000-01	Rice	nucleus	52.24	47.72
Zm00001d013542_P003	Maize	nucleus	52.34	47.68
Zm00001d007786_P001	Maize	nucleus	50.57	47.09
GSMUA_Achr4P17670_001	Banana	extracellular, plasma membrane	17.17	45.96
TraesCS7D01G061600.1	Wheat	cytosol, mitochondrion, nucleus, plastid	24.14	44.02
TraesCS7A01G067500.2	Wheat	cytosol	38.81	43.68
GSMUA_Achr6P04510_001	Banana	nucleus	55.98	43.49
Zm00001d033518_P001	Maize	nucleus	51.09	41.36
TraesCS5B01G458100.1	Wheat	cytosol	38.5	38.95
Zm00001d039440_P001	Maize	cytosol	9.05	35.66
Os02t0616300-00	Rice	vacuole	11.76	34.14
TraesCS5D01G192700.2	Wheat	nucleus	33.3	33.93
KRH14678	Soybean	nucleus	31.84	33.77
KRH73469	Soybean	nucleus	31.74	33.66
KRG89867	Soybean	nucleus	32.88	33.37
KRH20672	Soybean	nucleus	31.63	33.3
KRH70802	Soybean	nucleus	35.48	33.07
KRH74941	Soybean	nucleus	35.17	32.85
KRH36727	Soybean	nucleus	15.4	32.67
KRG89432	Soybean	nucleus	30.59	30.43
EER93271	Sorghum	cytosol	31.43	29.84
KRH56276	Soybean	cytosol	24.97	28.88
KRH11732	Soybean	nucleus	30.8	28.54
Zm00001d035554_P001	Maize	plastid	14.78	28.23
Os03t0789500-01	Rice	cytosol	0.62	2.64

Protein Annotations

EntrezGene:100805246	Gene3D:2.170.260.10	Gene3D:3.30.420.10	Gene3D:3.40.50.2300	MapMan:35.1	EMBL:ACUP02007211
InterPro:ArgoL1	InterPro:ArgoL2	InterPro:Argonaute_Mid_dom	InterPro:Argonaute_N	EnsemblPlantsGene:GLYMA_12G083500	GO:GO:0003674
GO:GO:0003676	GO:GO:0005488	GO:GO:0005515	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0031047	UniProt:I1LRB1	InterPro:IPR003100	InterPro:IPR003165	InterPro:IPR036397	EnsemblPlants:KRH25139
ProteinID:KRH25139	ProteinID:KRH25139.1	InterPro:PAZ_dom	InterPro:PAZ_dom_sf	PFAM:PF02170	PFAM:PF02171
PFAM:PF08699	PFAM:PF16486	PFAM:PF16487	PFAM:PF16488	PFscan:PS50821	PFscan:PS50822
PANTHER:PTHR22891	PANTHER:PTHR22891:SF24	InterPro:Piwi	InterPro:RNaseH-like_sf	InterPro:RNaseH_sf	SMART:SM00949
SMART:SM00950	SMART:SM01163	SUPFAM:SSF101690	SUPFAM:SSF53098	UniParc:UPI0002949EB0	SEG:seg

Description

hypothetical protein

Coordinates

chr12:+:6649319..6655621

Molecular Weight (calculated)

107566.0 Da

IEP (calculated)

10.008

GRAVY (calculated)

-0.395

Length

961 amino acids

Sequence
(BLAST)

001: MSPRGGSKQQ PDSRRQAPPS AAAAVPSPPG RGRGRGRGES SVPAPSLVNA PSAPPPASTI GVPSGAAPFR AALPPPAVES LTSAVEKQLT MQPSAPSSSK
101: AVRFKERPGF GLAGEKIKVR ANHFQVQVAE QDLFHYDVSI NPEITSKKVS RDVMTLLVQA HREKILGNRI PAYDGGKSLF TAGSLPFESK DFVIVLKDDD
201: EPGSSSSSSP TRKKREREYR VTIRLASRTD IHHLSQFLRR RQLDCPYETI QALDVVLRAT PSERFVVVGR SFFSPSLGKP GSLGSGTEYW RGYYQSLRPT
301: QMGLSLNINV SARAFYEPIP VIDFIESHFR ANPSRPLPDQ DRIKLKRVLR GVKVEVTHGK NLRRYKITGV TKEQLRKLMF TLDDNRTKSS VVQYFHEKYN
401: IVLKHTLLPA LQAGSDIKPI FLPMELCQIV AGQRYTKRLN EEQVTNLLRA SCQRPRDREN SIRQVVRQSN FSTDKFVSHF GIQVREDPAL LDARVLPAPM
501: LKYHDTGRES SVEPKMGQWN MIDKKMFNAG VVEHWTCLNF SGKINREFPS AFCHKLARMC SNKGMRFNSK PLLPITSAQS SQIESALVNL HKQSITRLAN
601: QGRLQLLIII LPDFEGSYEK IKRICETELG IVSQCCQPRH VCQMKPQYLE NVALKINVKV GGSNTVLNDA IARIIPRVSD RPTLILGADV THPQPGEDSS
701: PSIAAVVASM DWPYVTRYRG VVSAQTHREE IIQDLYNTCE DPVKGKVHSG IIRELLRAFR LSTNQKPERI IFYRDGVSEG QFSQVLLYEM DAIRRACASL
801: QEGYLPRVTF VVVQKRHHTR LFPVDHGSHD QTNKSGNIMP GTVVDTHICH PREFDFYLNS HAGMQGTSRP THYHVLFDEN NFTADGLQMF TNNLCYTYAR
901: CTRSVSIVPP VYYAHLAAFR ARCYIEVATS DSGSASGGRA ANCEVRLPSV KENVKDVMFF C

Best Arabidopsis Sequence Match ( AT2G27880.1 )
(BLAST)

001: MSNRGGGGHG GASRGRGGGR RSDQRQDQSS GQVAWPGLQQ SYGGRGGSVS AGRGRGNVGR GENTGDLTAT QVPVASAVSG GRGRGNIGDP TFSVASSSKT
101: VSVASSSKEE SKNTEVSETM SNLQITSTET KPEMTSLPPA SSKAVTFPVR PGRGTLGKKV MVRANHFLVQ VADRDLYHYD VSINPEVISK TVNRNVMKLL
201: VKNYKDSHLG GKSPAYDGRK SLYTAGPLPF DSKEFVVNLA EKRADGSSGK DRPFKVAVKN VTSTDLYQLQ QFLDRKQREA PYDTIQVLDV VLRDKPSNDY
301: VSVGRSFFHT SLGKDARDGR GELGDGIEYW RGYFQSLRLT QMGLSLNIDV SARSFYEPIV VTDFISKFLN IRDLNRPLRD SDRLKVKKVL RTLKVKLLHW
401: NGTKSAKISG ISSLPIRELR FTLEDKSEKT VVQYFAEKYN YRVKYQALPA IQTGSDTRPV YLPMELCQID EGQRYTKRLN EKQVTALLKA TCQRPPDREN
501: SIKNLVVKNN YNDDLSKEFG MSVTTQLASI EARVLPPPML KYHDSGKEKM VNPRLGQWNM IDKKMVNGAK VTSWTCVSFS TRIDRGLPQE FCKQLIGMCV
601: SKGMEFKPQP AIPFISCPPE HIEEALLDIH KRAPGLQLLI VILPDVTGSY GKIKRICETE LGIVSQCCQP RQVNKLNKQY MENVALKINV KTGGRNTVLN
701: DAIRRNIPLI TDRPTIIMGA DVTHPQPGED SSPSIAAVVA SMDWPEINKY RGLVSAQAHR EEIIQDLYKL VQDPQRGLVH SGLIREHFIA FRRATGQIPQ
801: RIIFYRDGVS EGQFSQVLLH EMTAIRKACN SLQENYVPRV TFVIVQKRHH TRLFPEQHGN RDMTDKSGNI QPGTVVDTKI CHPNEFDFYL NSHAGIQGTS
901: RPAHYHVLLD ENGFTADQLQ MLTNNLCYTY ARCTKSVSIV PPAYYAHLAA FRARYYMESE MSDGGSSRSR SSTTGVGQVI SQLPAIKDNV KEVMFYC

Arabidopsis Description

AGO5Protein argonaute 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJK3]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.