Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os03t0789466-00 | Rice | cytosol, mitochondrion, nucleus | 30.63 | 67.83 |
| EER90726 | Sorghum | cytosol | 46.54 | 55.48 |
| OQU91198 | Sorghum | nucleus | 32.71 | 44.55 |
| Os03t0800200-01 | Rice | plasma membrane | 42.09 | 40.26 |
| OQU88608 | Sorghum | plastid | 32.81 | 37.68 |
| OQU91197 | Sorghum | plastid | 30.63 | 35.07 |
| VIT_08s0007g04360.t01 | Wine grape | endoplasmic reticulum, golgi, vacuole | 27.47 | 32.67 |
| VIT_06s0061g01040.t01 | Wine grape | mitochondrion, nucleus | 32.81 | 32.17 |
| CDX71410 | Canola | nucleus | 30.04 | 31.93 |
| CDY04517 | Canola | plastid | 30.04 | 31.77 |
| Bra011993.1-P | Field mustard | plastid | 30.14 | 31.57 |
| KRH25139 | Soybean | plastid | 29.84 | 31.43 |
| KRH30536 | Soybean | plastid | 27.57 | 31.35 |
| OQU82149 | Sorghum | nucleus | 31.72 | 29.8 |
| KXG20286 | Sorghum | cytosol | 28.75 | 29.66 |
| AT2G27880.1 | Thale cress | cytosol, nucleus, plastid | 29.05 | 29.49 |
| KXG20965 | Sorghum | nucleus | 30.24 | 29.2 |
| Solyc06g074730.2.1 | Tomato | nucleus | 29.15 | 29.18 |
| PGSC0003DMT400018363 | Potato | cytosol, nucleus, plastid | 29.25 | 28.88 |
| EES18841 | Sorghum | nucleus | 30.63 | 27.95 |
| OQU86027 | Sorghum | plastid | 29.55 | 27.08 |
| EER91156 | Sorghum | nucleus | 22.73 | 24.6 |
| EER97198 | Sorghum | nucleus | 24.7 | 23.95 |
| KXG23356 | Sorghum | nucleus | 19.66 | 22.59 |
| OQU86696 | Sorghum | nucleus | 19.86 | 22.33 |
| EES18816 | Sorghum | nucleus | 19.86 | 22.11 |
| EES00570 | Sorghum | nucleus | 18.87 | 21.27 |
| EER92100 | Sorghum | cytosol | 19.86 | 19.46 |
| OQU89939 | Sorghum | endoplasmic reticulum, plasma membrane | 18.28 | 18.37 |
| KXG27113 | Sorghum | nucleus | 18.58 | 17.22 |
| Os03t0789500-01 | Rice | cytosol | 0.59 | 2.64 |
Protein Annotations
| Gene3D:2.170.260.10 | Gene3D:3.30.420.10 | Gene3D:3.40.50.2300 | MapMan:35.1 | InterPro:ArgoL1 | InterPro:ArgoL2 |
| InterPro:Argonaute_Mid_dom | UniProt:C5WX33 | EnsemblPlants:EER93271 | ProteinID:EER93271 | ProteinID:EER93271.3 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0031047 | InterPro:IPR003100 | InterPro:IPR036397 | InterPro:PAZ_dom | InterPro:PAZ_dom_sf | PFAM:PF02170 |
| PFAM:PF08699 | PFAM:PF16487 | PFAM:PF16488 | PFscan:PS50821 | PANTHER:PTHR22891 | PANTHER:PTHR22891:SF108 |
| InterPro:RNaseH_sf | SMART:SM00949 | SMART:SM01163 | EnsemblPlantsGene:SORBI_3001G053350 | SUPFAM:SSF101690 | UniParc:UPI000B8BB0D1 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:-:3942720..3955241
Molecular Weight (calculated)
116040.0 Da
IEP (calculated)
8.769
GRAVY (calculated)
-0.338
Length
1012 amino acids
Sequence
(BLAST)
(BLAST)
0001: MPQETIQVLD VVLRESPSWN YVTVSRSFFS TTFGHRGDIG DRLECWRGYY QSLRPTQMGL SLNIDISATS FFKPVSVIKF VEEYLNMRDT SRPLSDRDRV
0101: KIKKALRGVR IETTHQQDQI RRYKITGVTS IPMSQLIFPV DDKGTRKTVV QYFWDKYNYS LKHGSWPCLQ AGSDSRPVYL PMEVCKILEG QRYSKKLNDR
0201: QVTNILRATC KRPQEREQSI HDMVLHNKYA DDRFAQEFGI KVSSDLVTVP ARVLPPPLLK YHESGREKTC ALSVGQWNMI NKKMINGGTI DNWTCLNFSR
0301: MRPDEVQRFC MDLIHMCNAT GMVVNPRPFV DVKSAAPNYI ENALRDVHRR ATQMLAQQGV GNQLQLLIVI LPDVKSKESV RLTLELYLSV ACQSMLAGQT
0401: SNIWKMLHSK SMSRLVGATR FLSEPLYAMA YPLCQKSQQS SLVQMSHPPP AGEDSASSIA AVVASMDWSE ITKYRGLVSA QPHRQEIIED LFTVTKDPHK
0501: RHNVNNGMIP YAFSCAHKKG SHYLIKRKFG YALSRSKIKR VCETDIGIVS QCCLMKHDCR PNKIFLENIS LKNNAKVVAS MDWPEITNCT DSDQDWHSSH
0601: DETSQECIRV NVILLTTKVE VIVKKYSTVE YVANHAMRGI GAKFTDVYFL CDNRSIDAGT HLGQSCTLEC RHRLRGGQIS APKRFSEFLK EEQQKSNWHE
0701: IVDIPYDLQR PPEFLDKVVG LGDPSQWAFS MLVEALERTH NAGHSYRGVF SIDDLWYIPD FDCVEIRKKS EKCLDQKNYI LDLFVIVSII EMHFLLVEWD
0801: LSYKYPMYLD RLVKWIHDLK ETGTEYLSKV QRAVVFLNPA GWSAAKRIQL FDSLMIHYHK LELFNDRQNF RAALGQGSSD SQYSWKYNLS EEMMNCMGTQ
0901: KIYRDDYFGL LDFTRCFFTH MERIIGSEKQ ADAAIYLLAK DQIIRLLNLL LIKYQPTTGA LPAVGTSSAS IAIHHSAGGS VTTRQCSELS RIPRVNTLEV
1001: FHYFGFRSNP SS
0101: KIKKALRGVR IETTHQQDQI RRYKITGVTS IPMSQLIFPV DDKGTRKTVV QYFWDKYNYS LKHGSWPCLQ AGSDSRPVYL PMEVCKILEG QRYSKKLNDR
0201: QVTNILRATC KRPQEREQSI HDMVLHNKYA DDRFAQEFGI KVSSDLVTVP ARVLPPPLLK YHESGREKTC ALSVGQWNMI NKKMINGGTI DNWTCLNFSR
0301: MRPDEVQRFC MDLIHMCNAT GMVVNPRPFV DVKSAAPNYI ENALRDVHRR ATQMLAQQGV GNQLQLLIVI LPDVKSKESV RLTLELYLSV ACQSMLAGQT
0401: SNIWKMLHSK SMSRLVGATR FLSEPLYAMA YPLCQKSQQS SLVQMSHPPP AGEDSASSIA AVVASMDWSE ITKYRGLVSA QPHRQEIIED LFTVTKDPHK
0501: RHNVNNGMIP YAFSCAHKKG SHYLIKRKFG YALSRSKIKR VCETDIGIVS QCCLMKHDCR PNKIFLENIS LKNNAKVVAS MDWPEITNCT DSDQDWHSSH
0601: DETSQECIRV NVILLTTKVE VIVKKYSTVE YVANHAMRGI GAKFTDVYFL CDNRSIDAGT HLGQSCTLEC RHRLRGGQIS APKRFSEFLK EEQQKSNWHE
0701: IVDIPYDLQR PPEFLDKVVG LGDPSQWAFS MLVEALERTH NAGHSYRGVF SIDDLWYIPD FDCVEIRKKS EKCLDQKNYI LDLFVIVSII EMHFLLVEWD
0801: LSYKYPMYLD RLVKWIHDLK ETGTEYLSKV QRAVVFLNPA GWSAAKRIQL FDSLMIHYHK LELFNDRQNF RAALGQGSSD SQYSWKYNLS EEMMNCMGTQ
0901: KIYRDDYFGL LDFTRCFFTH MERIIGSEKQ ADAAIYLLAK DQIIRLLNLL LIKYQPTTGA LPAVGTSSAS IAIHHSAGGS VTTRQCSELS RIPRVNTLEV
1001: FHYFGFRSNP SS
0001: MVRKRRTDAP SEGGEGSGSR EAGPVSGGGR GSQRGGFQQG GGQHQGGRGY TPQPQQGGRG GRGYGQPPQQ QQQYGGPQEY QGRGRGGPPH QGGRGGYGGG
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC
Arabidopsis Description
AGO1ICU9 [Source:UniProtKB/TrEMBL;Acc:A0A178WL72]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.