Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G552900.1 | Wheat | mitochondrion | 37.98 | 87.47 |
| Os06t0729300-01 | Rice | nucleus | 86.26 | 87.09 |
| TraesCS7D01G553200.1 | Wheat | nucleus, plastid | 39.03 | 85.39 |
| Zm00001d014875_P001 | Maize | nucleus | 84.64 | 82.21 |
| TraesCS7D01G553000.1 | Wheat | cytosol | 78.82 | 80.12 |
| TraesCS7A01G557400.1 | Wheat | plastid | 78.72 | 79.94 |
| HORVU7Hr1G120600.3 | Barley | cytosol, nucleus | 79.2 | 78.01 |
| VIT_19s0014g01840.t01 | Wine grape | cytosol, nucleus, plastid | 56.2 | 75.8 |
| Solyc03g098280.2.1 | Tomato | nucleus | 67.56 | 72.24 |
| Solyc06g072300.2.1 | Tomato | nucleus | 71.76 | 71.35 |
| PGSC0003DMT400069313 | Potato | cytosol | 71.76 | 71.35 |
| OQU82149 | Sorghum | nucleus | 72.81 | 70.84 |
| CDY04311 | Canola | cytosol, nucleus, plastid | 65.55 | 70.1 |
| VIT_17s0053g00680.t01 | Wine grape | nucleus | 72.14 | 69.68 |
| OQU86027 | Sorghum | plastid | 72.61 | 68.93 |
| AT1G48410.2 | Thale cress | nucleus | 68.8 | 68.67 |
| CDY41831 | Canola | nucleus | 67.84 | 68.1 |
| CDY68174 | Canola | nucleus | 68.23 | 67.97 |
| EES18841 | Sorghum | nucleus | 71.18 | 67.27 |
| Bra014136.1-P | Field mustard | nucleus | 68.32 | 66.36 |
| PGSC0003DMT400079716 | Potato | nucleus | 70.99 | 66.02 |
| CDY23683 | Canola | cytosol, nucleus, plastid | 66.98 | 64.64 |
| Bra032254.1-P | Field mustard | nucleus | 68.51 | 64.63 |
| KXG20286 | Sorghum | cytosol | 60.21 | 64.32 |
| TraesCS3B01G027100.1 | Wheat | cytosol | 9.06 | 62.09 |
| EER90726 | Sorghum | cytosol | 48.85 | 60.31 |
| OQU91198 | Sorghum | nucleus | 41.89 | 59.08 |
| OQU91197 | Sorghum | plastid | 48.38 | 57.35 |
| OQU88608 | Sorghum | plastid | 45.71 | 54.37 |
| EER97198 | Sorghum | nucleus | 46.09 | 46.26 |
| EER91156 | Sorghum | nucleus | 38.36 | 42.99 |
| KXG23356 | Sorghum | nucleus | 30.53 | 36.32 |
| EES00570 | Sorghum | nucleus | 30.73 | 35.86 |
| EES18816 | Sorghum | nucleus | 30.63 | 35.31 |
| OQU86696 | Sorghum | nucleus | 29.58 | 34.44 |
| EER92100 | Sorghum | cytosol | 32.35 | 32.82 |
| EER93271 | Sorghum | cytosol | 29.2 | 30.24 |
| KXG27113 | Sorghum | nucleus | 29.68 | 28.48 |
| OQU89939 | Sorghum | endoplasmic reticulum, plasma membrane | 21.37 | 22.24 |
Protein Annotations
| MapMan:16.10.3 | Gene3D:2.170.260.10 | Gene3D:3.30.420.10 | Gene3D:3.40.50.2300 | UniProt:A0A194YLW3 | InterPro:ArgoL1 |
| InterPro:ArgoL2 | InterPro:Argonaut_Gly-rich | InterPro:Argonaute_Mid_dom | InterPro:Argonaute_N | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0031047 | InterPro:IPR003100 | InterPro:IPR003165 | InterPro:IPR036397 | EnsemblPlants:KXG20965 | ProteinID:KXG20965 |
| ProteinID:KXG20965.1 | InterPro:PAZ_dom | InterPro:PAZ_dom_sf | PFAM:PF02170 | PFAM:PF02171 | PFAM:PF08699 |
| PFAM:PF12764 | PFAM:PF16486 | PFAM:PF16487 | PFAM:PF16488 | PFscan:PS50821 | PFscan:PS50822 |
| PANTHER:PTHR22891 | PANTHER:PTHR22891:SF57 | InterPro:Piwi | InterPro:RNaseH-like_sf | InterPro:RNaseH_sf | SMART:SM00949 |
| SMART:SM00950 | SMART:SM01163 | EnsemblPlantsGene:SORBI_3010G276600 | SUPFAM:SSF101690 | SUPFAM:SSF53098 | UniParc:UPI0003C6E69C |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr10:+:60972238..60979018
Molecular Weight (calculated)
116477.0 Da
IEP (calculated)
9.079
GRAVY (calculated)
-0.412
Length
1048 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGSWRPKLPG LGEGSQDAEP GGGGRGPGRG FRGRGGSYHQ QLPQGGRGTG YYQHGQGSML QPRGVMMSQR WQPAGPAAGY LGQGQAYREV QAPQYYGGGR
0101: GGRGAGPSAI APELRQAMET SHEPDNISPE TGSPDLSPRA STVEVTDQLK DLSVQDESSM CQDIVQAFPV SSNACKFPHR PGSGSIGTRC LVKANHFFAE
0201: LPDKDLHQYD VSITPEVTSR IVNRSVMEEL VKLHKMSYLG GRLPAYDGRK SLYTAGPLPF ISKEFHITLL EEDDGSGVER RKKTYKVVIK FAARADLCRL
0301: EQFLAGRQAE APQEALQVLD IVLRELPTTR YAPFGRSFFS PDLGRRRSLG EGIECWRGFY QSIRPTQMGL SLNIDMSATA FFEPLPVIDF VAQLLNTDIH
0401: SRPLSDAERV KIKKALRGVK VEVTHRGNMR RKYRIAGLTS LATRELTFPV DQGGTLKSVV QYFQETYGFA IQHTYLPCLQ VGNQQHPNYL PMEVCKIVEG
0501: QRYSKRLNQG QIRALLEETC QRPHDRERDI IQMVNHNSYH EDPYAKEFGI KISERLASIE ARILPAPRLK YNETGREKDC LPRVGQWNMM NKKMVNGGRV
0601: RSWICVNFAR NVQESVAVGF CRELARMCQA SGMDFALEPI LPPIYAHPDK VERALKARFH DAMSMLGPQR KELDLLIGIL PDNNGSLYGD LKRICEIDLG
0701: LVSQCCCAKQ VFKMNKQILA NLALKINVKV GGRNTVLADA VSRRIPLVTD RPTIIFGADV THPHPGEDSS PSIAAVVASQ DWPEVTKYAG LVSAQSHRQE
0801: LIEDLYKVVH DPQKGTICGG MIRELLISFK RSTGQKPQRI LFYRDGVSEG QFYQVLLHEL DAIRKACASL EANYQPQVTF IVVQKRHHTR LFAHNHNDQN
0901: SVDRSGNILP GTVVDSKICH PTEFDFFLCS HAGIKGTSRP AHYHVLWDEN NFTADALQTL TNNLCYTYAR CTRSVSIVPP AYYAHLAAFR ARFYMEPDSS
1001: DSGSLASGSR GGAPSSSSTS RSTRAATSGA VRPLPVLKDS VKNVMFYC
0101: GGRGAGPSAI APELRQAMET SHEPDNISPE TGSPDLSPRA STVEVTDQLK DLSVQDESSM CQDIVQAFPV SSNACKFPHR PGSGSIGTRC LVKANHFFAE
0201: LPDKDLHQYD VSITPEVTSR IVNRSVMEEL VKLHKMSYLG GRLPAYDGRK SLYTAGPLPF ISKEFHITLL EEDDGSGVER RKKTYKVVIK FAARADLCRL
0301: EQFLAGRQAE APQEALQVLD IVLRELPTTR YAPFGRSFFS PDLGRRRSLG EGIECWRGFY QSIRPTQMGL SLNIDMSATA FFEPLPVIDF VAQLLNTDIH
0401: SRPLSDAERV KIKKALRGVK VEVTHRGNMR RKYRIAGLTS LATRELTFPV DQGGTLKSVV QYFQETYGFA IQHTYLPCLQ VGNQQHPNYL PMEVCKIVEG
0501: QRYSKRLNQG QIRALLEETC QRPHDRERDI IQMVNHNSYH EDPYAKEFGI KISERLASIE ARILPAPRLK YNETGREKDC LPRVGQWNMM NKKMVNGGRV
0601: RSWICVNFAR NVQESVAVGF CRELARMCQA SGMDFALEPI LPPIYAHPDK VERALKARFH DAMSMLGPQR KELDLLIGIL PDNNGSLYGD LKRICEIDLG
0701: LVSQCCCAKQ VFKMNKQILA NLALKINVKV GGRNTVLADA VSRRIPLVTD RPTIIFGADV THPHPGEDSS PSIAAVVASQ DWPEVTKYAG LVSAQSHRQE
0801: LIEDLYKVVH DPQKGTICGG MIRELLISFK RSTGQKPQRI LFYRDGVSEG QFYQVLLHEL DAIRKACASL EANYQPQVTF IVVQKRHHTR LFAHNHNDQN
0901: SVDRSGNILP GTVVDSKICH PTEFDFFLCS HAGIKGTSRP AHYHVLWDEN NFTADALQTL TNNLCYTYAR CTRSVSIVPP AYYAHLAAFR ARFYMEPDSS
1001: DSGSLASGSR GGAPSSSSTS RSTRAATSGA VRPLPVLKDS VKNVMFYC
0001: MVRKRRTDAP SEGGEGSGSR EAGPVSGGGR GSQRGGFQQG GGQHQGGRGY TPQPQQGGRG GRGYGQPPQQ QQQYGGPQEY QGRGRGGPPH QGGRGGYGGG
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC
Arabidopsis Description
AGO1ICU9 [Source:UniProtKB/TrEMBL;Acc:A0A178WL72]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.