Factsheet for Os06t0729300-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G552900.1	Wheat	mitochondrion	38.63	88.13
KXG20965	Sorghum	nucleus	87.09	86.26
TraesCS7D01G553200.1	Wheat	nucleus, plastid	39.69	86.01
TraesCS7A01G557400.1	Wheat	plastid	80.73	81.2
TraesCS7B01G482100.1	Wheat	nucleus	80.64	81.1
TraesCS7D01G553000.1	Wheat	cytosol	80.54	81.09
Os02t0831600-01	Rice	extracellular	78.61	80.71
HORVU7Hr1G120600.3	Barley	cytosol, nucleus	80.83	78.85
Zm00001d014875_P001	Maize	nucleus	80.25	77.2
VIT_19s0014g01840.t01	Wine grape	cytosol, nucleus, plastid	57.13	76.32
Solyc03g098280.2.1	Tomato	nucleus	67.92	71.94
Solyc06g072300.2.1	Tomato	nucleus	71.97	70.87
PGSC0003DMT400069313	Potato	cytosol	71.87	70.78
CDY04311	Canola	cytosol, nucleus, plastid	66.57	70.51
VIT_17s0053g00680.t01	Wine grape	nucleus	72.54	69.4
Os04t0566500-04	Rice	nucleus	72.83	68.66
Os02t0672200-01	Rice	cytosol	71.0	68.11
AT1G48410.2	Thale cress	nucleus	68.79	68.0
CDY68174	Canola	nucleus	68.59	67.68
CDY41831	Canola	nucleus	67.92	67.53
Bra014136.1-P	Field mustard	nucleus	68.5	65.89
PGSC0003DMT400079716	Potato	nucleus	70.81	65.22
Os06t0597400-01	Rice	cytosol	61.08	64.76
CDY23683	Canola	cytosol, nucleus, plastid	67.24	64.27
Bra032254.1-P	Field mustard	nucleus	68.79	64.27
Os03t0682200-00	Rice	nucleus	27.55	61.51
Os03t0789466-00	Rice	cytosol, mitochondrion, nucleus	23.41	53.17
Os03t0682600-00	Rice	nucleus	38.25	53.15
Os02t0169400-01	Rice	nucleus	43.93	52.05
Os07t0471300-01	Rice	nucleus	36.51	51.01
Os03t0800200-01	Rice	plasma membrane	50.77	49.81
Os07t0188000-01	Rice	nucleus	47.59	46.96
Os07t0265600-01	Rice	cytosol, nucleus	13.39	44.98
Os02t0616300-00	Rice	vacuole	12.33	38.67
Os04t0151800-02	Rice	nucleus	31.7	36.11
Os01t0275600-01	Rice	nucleus	30.15	34.62
Os03t0449200-00	Rice	nucleus	32.85	32.54
Os04t0615700-01	Rice	nucleus, plasma membrane	30.25	30.37
Os01t0275200-00	Rice	golgi, peroxisome, plastid	13.49	29.98
Os03t0789500-01	Rice	cytosol	0.48	2.2
Os04t0615800-01	Rice	nucleus	0.19	0.38

Protein Annotations

MapMan:16.10.3	Gene3D:2.170.260.10	Gene3D:3.30.420.10	Gene3D:3.40.50.2300	EntrezGene:4342138	EMBL:AK111500
InterPro:ArgoL1	InterPro:ArgoL2	InterPro:Argonaute_Mid_dom	InterPro:Argonaute_N	ProteinID:BAD62111.1	ProteinID:BAF20562.1
ProteinID:BAS99632.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488	GO:GO:0005515
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0031047	InterPro:IPR003100	InterPro:IPR003165
InterPro:IPR036397	EnsemblPlantsGene:Os06g0729300	EnsemblPlants:Os06t0729300-01	InterPro:PAZ_dom	InterPro:PAZ_dom_sf	PFAM:PF02170
PFAM:PF02171	PFAM:PF08699	PFAM:PF16486	PFAM:PF16487	PFAM:PF16488	PFscan:PS50821
PFscan:PS50822	PANTHER:PTHR22891	PANTHER:PTHR22891:SF57	InterPro:Piwi	UniProt:Q5Z5B2	InterPro:RNaseH-like_sf
InterPro:RNaseH_sf	SMART:SM00949	SMART:SM00950	SMART:SM01163	SUPFAM:SSF101690	SUPFAM:SSF53098
UniParc:UPI0000450758	RefSeq:XP_015642511.1	RefSeq:XP_015642512.1	SEG:seg	:	:

Description

ARGONAUTE 1DSimilar to AGO1 homologous protein. (Os06t0729300-01);Similar to Protein argonaute 1D. (Os06t0729300-02)

Coordinates

chr6:+:31069076..31077365

Molecular Weight (calculated)

115930.0 Da

IEP (calculated)

9.266

GRAVY (calculated)

-0.452

Length

1038 amino acids

Sequence
(BLAST)

0001: MGSRRPRLPG FGEDCEPRGG GRGGGGRGRG SYYPQAQQYH PQGHGGRGGA GYYHGAAPQP RGAMVVQQWR PATAAAEHLG HQQPYNSSVR PQHYYGPSAI
0101: APELLQAMDA PHEPPANVSS PEAASPEASS PRSLALEVTE QLQDLSVQYQ LSESQEEIVQ HVPVSTKSFK FPHRPGSGSI GTRCLVKANH FFAQLPDKDL
0201: HQYDVSITPE LTSRIRSRAV MEELVRLHKM SYLGGRLPAY DGRKSLYTAG PLPFTSKEFR ISLLEEDDGS GSERRQKTYN VVIKFAARAD LHRLEQFLAG
0301: RQAEAPQEAL QVLDIVLREL PTARYAPFGR SFFSPDLGRR RSLGEGLETW RGFYQSIRPT QMGLSLNIDM SATAFFEPLP VIDFVIQLLN TDIRSRPLSD
0401: AERVKIKKAL RGVKVGVTHR GNMRRKYRIS GLTSQATREL TFPVDQGGTV KSVVQYFQET YGFAIQHTYL PCLQVGNQQR PNYLPMEVCK IVEGQRYSKR
0501: LNQNQIRALL EETCQRPHDR ERDIIQMVNH NSYHEDPYAK EFGIKISERL ALVEARILPA PRLKYNETGR EKDCLPRVGQ WNMMNKKMVN GGRVRSWICV
0601: NFARNVQESV ASGFCRELAR MCQASGMDFA LEPVLPSMYA RPDQVERALK ARFHDAMNIL GPQHKELDLL IGLLPDNNGS LYGDLKRICE IDLGLVSQCC
0701: CTKQVFKMNK QILANLALKI NVKVGGRNTV LVDAVSRRIP LVTDRPTIIF GADVTHPHPG EDSSPSIAAV VASQDWPEVT KYAGLVSAQS HRQELIDDLY
0801: NITHDPHRGP ICGGMVRELL ISFKRSTGQK PQRIIFYRDG VSEGQFYQVL LHELDAIRKA CASLEANYQP QVTFIVVQKR HHTRLFAHNH NDQNSVDRSG
0901: NILPGTVVDS KICHPTEFDF FLCSHAGIKG TSRPAHYHVL WDENNFTADA LQTLTNNLCY TYARCTRSVS IVPPAYYAHL AAFRARFYME SDSSDSGSMA
1001: SGRGGGSSTS RSTRAAGGGA VRPLPALKDS VKNVMFYC

Best Arabidopsis Sequence Match ( AT1G48410.1 )
(BLAST)

0001: MVRKRRTDAP SEGGEGSGSR EAGPVSGGGR GSQRGGFQQG GGQHQGGRGY TPQPQQGGRG GRGYGQPPQQ QQQYGGPQEY QGRGRGGPPH QGGRGGYGGG
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC

Arabidopsis Description

AGO1ICU9 [Source:UniProtKB/TrEMBL;Acc:A0A178WL72]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.