Factsheet for Os04t0151800-02

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Os05t0506200-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G27040.1	Os05t0506200-01	AT5G04290.1	19410546

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES18816	Sorghum	nucleus	85.18	85.37
Zm00001d039214_P025	Maize	nucleus	84.19	83.01
TraesCS1D01G453600.1	Wheat	nucleus	83.31	82.32
TraesCS1B01G480100.1	Wheat	nucleus	83.21	81.77
TraesCS1A01G445500.1	Wheat	golgi, unclear	82.99	81.73
Os01t0275600-01	Rice	nucleus	79.58	80.2
TraesCS7A01G533100.1	Wheat	cytosol	76.4	77.25
TraesCS7D01G520400.1	Wheat	nucleus	75.85	76.02
TraesCS7B01G450300.1	Wheat	nucleus	75.96	75.3
GSMUA_Achr9P05150_001	Banana	nucleus	74.97	74.64
PGSC0003DMT400070806	Potato	nucleus	23.71	73.97
VIT_06s0009g01200.t01	Wine grape	nucleus	73.11	72.95
TraesCS7B01G450200.2	Wheat	nucleus	73.77	72.57
Solyc01g008960.2.1	Tomato	nucleus	71.79	71.95
Solyc06g073540.2.1	Tomato	nucleus	71.57	71.41
PGSC0003DMT400069459	Potato	nucleus	71.57	71.41
PGSC0003DMT400058471	Potato	nucleus	71.24	71.4
KRH14678	Soybean	nucleus	70.69	71.08
KRH73469	Soybean	nucleus	70.03	70.42
Os07t0265600-01	Rice	cytosol, nucleus	23.71	69.9
VIT_08s0040g00070.t01	Wine grape	nucleus	68.39	67.86
CDY72062	Canola	plastid	21.95	67.34
Solyc01g096750.1.1	Tomato	nucleus	65.09	67.31
KRG89867	Soybean	nucleus	69.26	66.63
Solyc06g073530.1.1	Tomato	nucleus	65.86	66.37
CDY48192	Canola	nucleus	67.07	66.27
CDY04475	Canola	nucleus	67.07	66.2
Bra034318.1-P	Field mustard	nucleus	66.96	66.16
CDY56413	Canola	nucleus	66.96	66.09
CDX77061	Canola	nucleus	66.74	65.94
AT5G21150.1	Thale cress	nucleus	64.22	65.29
AT2G27040.1	Thale cress	nucleus	66.19	65.26
Bra020152.1-P	Field mustard	nucleus	64.11	64.46
CDY09103	Canola	nucleus	64.0	64.35
PGSC0003DMT400039204	Potato	cytosol	10.43	63.33
Bra002361.1-P	Field mustard	nucleus	62.79	62.79
CDX92417	Canola	nucleus	44.24	62.58
CDX92405	Canola	nucleus	62.24	61.97
VIT_13s0175g00140.t01	Wine grape	nucleus	60.15	61.92
CDX92406	Canola	nucleus	60.04	60.51
CDY16587	Canola	nucleus	58.51	60.43
CDY59516	Canola	nucleus	59.71	60.04
AT5G21030.2	Thale cress	cytosol	56.09	59.84
Bra002360.1-P	Field mustard	nucleus	59.6	58.39
Os01t0275200-00	Rice	golgi, peroxisome, plastid	29.64	57.82
KRH56276	Soybean	cytosol	50.05	54.87
CDY16595	Canola	nucleus	55.1	54.57
Solyc03g111760.2.1	Tomato	mitochondrion	48.85	48.58
CDY62055	Canola	nucleus	28.98	45.83
Os03t0682200-00	Rice	nucleus	19.43	38.06
Os03t0682600-00	Rice	nucleus	27.88	34.0
Os03t0789466-00	Rice	cytosol, mitochondrion, nucleus	16.68	33.26
Os02t0831600-01	Rice	extracellular	36.77	33.14
Os07t0471300-01	Rice	nucleus	26.67	32.71
Os06t0597400-01	Rice	cytosol	35.02	32.58
Os06t0729300-01	Rice	nucleus	36.11	31.7
Os02t0672200-01	Rice	cytosol	37.54	31.61
Bra002349.1-P	Field mustard	nucleus	57.41	30.75
Os03t0800200-01	Rice	plasma membrane	35.57	30.62
Os04t0566500-04	Rice	nucleus	36.77	30.43
Os02t0169400-01	Rice	nucleus	29.2	30.37
Os07t0188000-01	Rice	nucleus	33.92	29.37
Os02t0616300-00	Rice	vacuole	9.33	25.68
Os04t0615700-01	Rice	nucleus, plasma membrane	28.98	25.53
Os03t0449200-00	Rice	nucleus	28.21	24.52
Os03t0789500-01	Rice	cytosol	0.55	2.2
Os04t0615800-01	Rice	nucleus	0.33	0.57

Protein Annotations

MapMan:12.5.1.13	Gene3D:2.170.260.10	Gene3D:3.30.420.10	Gene3D:3.40.50.2300	EntrezGene:4335025	EMBL:AK122078
InterPro:ArgoL1	InterPro:ArgoL2	InterPro:Argonaute_Mid_dom	InterPro:Argonaute_N	ProteinID:BAF14029.1	ProteinID:BAS87801.1
ProteinID:BAS87802.1	ProteinID:EEE60454.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488	GO:GO:0005515
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0031047	InterPro:IPR003100	InterPro:IPR003165
InterPro:IPR036397	EnsemblPlantsGene:Os04g0151800	EnsemblPlants:Os04t0151800-02	InterPro:PAZ_dom	InterPro:PAZ_dom_sf	PFAM:PF02170
PFAM:PF02171	PFAM:PF08699	PFAM:PF16486	PFAM:PF16487	PFAM:PF16488	PFscan:PS50821
PFscan:PS50822	PANTHER:PTHR22891	PANTHER:PTHR22891:SF56	InterPro:Piwi	UniProt:Q0JF58	InterPro:RNaseH-like_sf
InterPro:RNaseH_sf	SMART:SM00950	SMART:SM01163	SUPFAM:SSF101690	SUPFAM:SSF53098	UniParc:UPI0000DD8F38
RefSeq:XP_015636673.1	SEG:seg	:	:	:	:

Description

ARGONAUTE 4BArgonaute and Dicer protein, PAZ domain containing protein. (Os04t0151800-01);Argonaute and Dicer protein, PAZ domain containing protein. (Os04t0151800-02);Similar to Protein argonaute 4B. (Os04t0151800-03);Similar to H0820C10.3 protein. (Os04t0151800-04)

Coordinates

chr4:-:3555377..3562793

Molecular Weight (calculated)

101746.0 Da

IEP (calculated)

9.199

GRAVY (calculated)

-0.412

Length

911 amino acids

Sequence
(BLAST)

001: MDAHDGEADE LPPPPPVPAN VVPIKADDVE SEVPANKPAK PKRFPMARPG LGRKGQPIQL LANHYKVSVK SSEEYFFHYN VILKYEDDRP VDGKGVGRKV
101: IDKLQQTYRS ELSSKDFAYD GEKSLFTIGA LPQVTNEFTV VLEDVSTGKT AANGSPGGND SPGGSDRKRV RRPYQTKTFK VELCFAAKIP MNAIAQAIKG
201: QESENSQEAL RVLDIILRQH SAKQGCLLVR QSFFHNNPNN FVDLGGGVMG CRGFHSSFRG TQSGLSLNID VSTTMIVKPG PVIDFLLANQ KVDHPDRIDW
301: QKAKRALKNL RIRTTPVNSE FKIIGLSDRN CNEQMFSLRQ RNGNNGDVDE VEVTVYDYFV KNKGIELRYS GNLPCINVGK PKRPTYFPIE LCSLIPLQRY
401: TKALSTLQRS SLVEKSRQKP QERMSVLNDA LRHSNYDSDP MLRASGISIA QNFTQVEGRV LQPPKLKAGN GEDIFPRNGR WNFNNKKLIQ TCSVDKWAVV
501: NFSARCDVRN LIRDLIRNAS AKGIQMAEPF DVFEESPSLR RAPVSRRVDD MFEQIKSKLP GAPKFLLCLL PERKNCEVYG PWKRKCLAEF GIVTQCLAPQ
601: RVNDQYLLNL LLKINAKLGG INSLLQIEAS PSIPLVSKTP TIILGMDVSH GQPGQSDRPS IAAVVSSRQW PLISKYRASV HTQSPKLEMM SSLFKPRGTE
701: DDGLIRESLI DFYTSSGKRK PDHVIVFRDG VSESQFTQVI NIELDQIIEA CKFLDEKWSP KFTVIVAQKN HHTKFFQSGS PDNVPPGTVV DKQVCHPRNY
801: DFYMCAHAGM IGTTRPTHYH VLHDEIGFSP DDLQELVHSL SYVYQRSTTA ISVVAPICYA HLAAAQVGTF LKFEDMSDAS SSQGGHTSVG SVPVPELPRL
901: HEKVRSSMFF C

Best Arabidopsis Sequence Match ( AT2G27040.2 )
(BLAST)

001: MDSTNGNGAD LESANGANGS GVTEALPPPP PVIPPNVEPV RVKTELAEKK GPVRVPMARK GFGTRGQKIP LLTNHFKVDV ANLQGHFFHY SVALFYDDGR
101: PVEQKGVGRK ILDKVHQTYH SDLDGKEFAY DGEKTLFTYG ALPSNKMDFS VVLEEVSATR ANGNGSPNGN ESPSDGDRKR LRRPNRSKNF RVEISYAAKI
201: PLQALANAMR GQESENSQEA IRVLDIILRQ HAARQGCLLV RQSFFHNDPT NCEPVGGNIL GCRGFHSSFR TTQGGMSLNM DVTTTMIIKP GPVVDFLIAN
301: QNARDPYSID WSKAKRTLKN LRVKVSPSGQ EFKITGLSDK PCREQTFELK KRNPNENGEF ETTEVTVADY FRDTRHIDLQ YSADLPCINV GKPKRPTYIP
401: LELCALVPLQ RYTKALTTFQ RSALVEKSRQ KPQERMTVLS KALKVSNYDA EPLLRSCGIS ISSNFTQVEG RVLPAPKLKM GCGSETFPRN GRWNFNNKEF
501: VEPTKIQRWV VVNFSARCNV RQVVDDLIKI GGSKGIEIAS PFQVFEEGNQ FRRAPPMIRV ENMFKDIQSK LPGVPQFILC VLPDKKNSDL YGPWKKKNLT
601: EFGIVTQCMA PTRQPNDQYL TNLLLKINAK LGGLNSMLSV ERTPAFTVIS KVPTIILGMD VSHGSPGQSD VPSIAAVVSS REWPLISKYR ASVRTQPSKA
701: EMIESLVKKN GTEDDGIIKE LLVDFYTSSN KRKPEHIIIF RDGVSESQFN QVLNIELDQI IEACKLLDAN WNPKFLLLVA QKNHHTKFFQ PTSPENVPPG
801: TIIDNKICHP KNNDFYLCAH AGMIGTTRPT HYHVLYDEIG FSADELQELV HSLSYVYQRS TSAISVVAPI CYAHLAAAQL GTFMKFEDQS ETSSSHGGIT
901: APGPISVAQL PRLKDNVANS MFFC

Arabidopsis Description

AGO4Protein argonaute 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVD5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.