Factsheet for Os07t0471300-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 4

Predictors

GFP

MS/MS

Papers

nucleus: 23303719

msms PMID: 23303719 doi

Q He, L Chen, Y Xu, W Yu

State Key Laboratory for Agrobiotechnology, Institute of Plant Molecular Biology and Agricultural Biotechnology, School of Life Sciences, The Chinese University of Hong Kong, Shatin, Hong Kong.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G135800.1	Wheat	cytosol	57.87	51.13
TraesCS3D01G118600.1	Wheat	cytosol, mitochondrion, nucleus	57.6	50.95
Os03t0682200-00	Rice	nucleus	28.8	46.02
Zm00001d021345_P001	Maize	nucleus	55.18	44.13
EER97198	Sorghum	nucleus	58.55	41.67
Os07t0265600-01	Rice	cytosol, nucleus	17.23	41.42
Zm00001d006351_P001	Maize	nucleus	57.87	40.84
EER91156	Sorghum	nucleus	51.28	40.75
TraesCS3A01G116800.1	Wheat	nucleus	57.74	40.59
HORVU3Hr1G021290.1	Barley	cytosol, nucleus	57.34	40.53
Zm00001d033206_P001	Maize	cytosol	49.93	38.41
Os03t0789466-00	Rice	cytosol, mitochondrion, nucleus	23.55	38.29
Os06t0597400-01	Rice	cytosol	50.07	38.0
Os02t0831600-01	Rice	extracellular	50.74	37.29
Os03t0682600-00	Rice	nucleus	37.42	37.22
Os06t0729300-01	Rice	nucleus	51.01	36.51
Os02t0672200-01	Rice	cytosol	51.95	35.67
Os04t0566500-04	Rice	nucleus	52.36	35.33
Os02t0169400-01	Rice	nucleus	39.57	33.56
Os03t0800200-01	Rice	plasma membrane	44.28	31.1
Os07t0188000-01	Rice	nucleus	44.01	31.08
Os02t0616300-00	Rice	vacuole	13.73	30.82
Os01t0275200-00	Rice	golgi, peroxisome, plastid	17.36	27.62
Os01t0275600-01	Rice	nucleus	33.24	27.32
Os04t0151800-02	Rice	nucleus	32.71	26.67
Os03t0449200-00	Rice	nucleus	36.47	25.86
Os04t0615700-01	Rice	nucleus, plasma membrane	31.9	22.92
OQU89939	Sorghum	endoplasmic reticulum, plasma membrane	28.26	20.85
Os03t0789500-01	Rice	cytosol	0.94	3.08
Os04t0615800-01	Rice	nucleus	0.4	0.57

Protein Annotations

Gene3D:2.170.260.10	Gene3D:3.30.420.10	Gene3D:3.40.50.2300	MapMan:35.1	UniProt:A0A0P0X663	InterPro:ArgoL1
InterPro:ArgoL2	InterPro:Argonaute_Mid_dom	ProteinID:BAT01425.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488
GO:GO:0005515	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0031047	InterPro:IPR003100
InterPro:IPR003165	InterPro:IPR036397	EnsemblPlantsGene:Os07g0471300	EnsemblPlants:Os07t0471300-01	InterPro:PAZ_dom	InterPro:PAZ_dom_sf
PFAM:PF02170	PFAM:PF02171	PFAM:PF08699	PFAM:PF16487	PFAM:PF16488	PFscan:PS50821
PFscan:PS50822	PANTHER:PTHR22891	PANTHER:PTHR22891:SF103	InterPro:Piwi	InterPro:RNaseH-like_sf	InterPro:RNaseH_sf
SMART:SM00949	SMART:SM00950	SMART:SM01163	SUPFAM:SSF101690	SUPFAM:SSF53098	UniParc:UPI0000E12AFC

Description

ARGONAUTE 18Similar to Protein argonaute 18. (Os07t0471300-01)

Coordinates

chr7:+:16894746..16900204

Molecular Weight (calculated)

83516.3 Da

IEP (calculated)

9.265

GRAVY (calculated)

-0.305

Length

743 amino acids

Sequence
(BLAST)

001: VELSGSRKFK VAIRHVAPVS LQDLRMVMAG CPAGIPSQAL QLLDIVLRDM VLAERNDMGY VAFGRSYFSP GLGSRELDKG IFAWKGFYQS CRVTQQGLSL
101: NIDMSSTAFI EPGRVLNFVE KAIGRRITNA ITVGYFLNNY GNELMRTLKG VKVEVTHRGN LRKKYRIAGF TEQSADVQTF TSSDGIKTVK EYFNKKYNLK
201: LAFGYLPCLQ VGSKERPNYL PMELCNIVPG QRYKNRLSPT QVSNLINITN DRPCDRESSI RQTVSSNQYN STERADEFGI EVDSYPTTLK ARVLKAPMLK
301: YHDSGRVRVC TPEDGAWNMK DKKVVNGATI KSWACVNLCE GLDNRVVEAF CLQLVRTSKI TGLDFANVSL PILKADPHNV KTDLPMRYQE ACSWSRDNKI
401: DLLLVVMTDD KNNASLYGDV KRICETEIGV LSQCCRAKQV YKERNVQYCA NVALKINAKA GGRNSVFLNV EASLPVVSKS PTIIFGADVT HPGSFDESTP
501: SIASVVASAD WPEVTKYNSV VRMQASRKEI IQDLDSIVRE LLNAFKRDSK MEPKQLIFYR DGVSEGQFQQ VVESEIPEIE KAWKSLYAGK PRITFIVVQK
601: RHHTRLFPNN YNDPRGMDGT GNVRPGTVVD TVICHPREFD FFLCSQAGIK GTSRPSHYHV LRDDNNFTAD QLQSVTNNLC YLYTSCTRSV SIPPPVYYAH
701: KLAFRARFYL TQVPVAGGDP GAAKFQWVLP EIKEEVKKSM FFC

Best Arabidopsis Sequence Match ( AT1G48410.1 )
(BLAST)

0001: MVRKRRTDAP SEGGEGSGSR EAGPVSGGGR GSQRGGFQQG GGQHQGGRGY TPQPQQGGRG GRGYGQPPQQ QQQYGGPQEY QGRGRGGPPH QGGRGGYGGG
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC

Arabidopsis Description

AGO1ICU9 [Source:UniProtKB/TrEMBL;Acc:A0A178WL72]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.