Factsheet for Os02t0616300-00

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

nucleus 3
extracellular 3
endoplasmic reticulum 3
vacuole 4
plasma membrane 4
golgi 3
peroxisome 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	peroxisome
Plant-mPloc:	nucleus, plasma membrane, plastid
PProwler:	secretory
TargetP:	secretory
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0789466-00	Rice	cytosol, mitochondrion, nucleus	41.39	29.98
TraesCS7D01G061600.1	Wheat	cytosol, mitochondrion, nucleus, plastid	35.05	22.01
TraesCS7A01G067500.2	Wheat	cytosol	52.57	20.37
Os07t0471300-01	Rice	nucleus	30.82	13.73
VIT_08s0007g04360.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	34.44	13.4
Os03t0800200-01	Rice	plasma membrane	42.3	13.23
VIT_06s0061g01040.t01	Wine grape	mitochondrion, nucleus	41.09	13.18
Os03t0682600-00	Rice	nucleus	29.61	13.12
KRH30536	Soybean	plastid	35.05	13.03
Os02t0831600-01	Rice	extracellular	39.27	12.86
Os01t0275200-00	Rice	golgi, peroxisome, plastid	18.13	12.85
Os07t0188000-01	Rice	nucleus	39.88	12.55
Os06t0729300-01	Rice	nucleus	38.67	12.33
Os02t0672200-01	Rice	cytosol	39.58	12.11
CDX71410	Canola	nucleus	34.44	11.97
Os06t0597400-01	Rice	cytosol	35.05	11.85
Os04t0566500-04	Rice	nucleus	39.27	11.81
KRH25139	Soybean	plastid	34.14	11.76
AT2G27880.1	Thale cress	cytosol, nucleus, plastid	35.35	11.74
Bra011993.1-P	Field mustard	plastid	34.14	11.7
CDY04517	Canola	plastid	33.53	11.6
PGSC0003DMT400018363	Potato	cytosol, nucleus, plastid	33.84	10.93
Os02t0169400-01	Rice	nucleus	28.1	10.62
Solyc06g074730.2.1	Tomato	nucleus	31.42	10.29
Os04t0151800-02	Rice	nucleus	25.68	9.33
Os01t0275600-01	Rice	nucleus	25.38	9.29
Os04t0615700-01	Rice	nucleus, plasma membrane	22.66	7.25
Os03t0449200-00	Rice	nucleus	22.66	7.16
Os03t0682200-00	Rice	nucleus	8.46	6.02
Os07t0265600-01	Rice	cytosol, nucleus	0.0	0.0
Os04t0615800-01	Rice	nucleus	0.0	0.0
Os03t0789500-01	Rice	cytosol	0.0	0.0

Protein Annotations

Gene3D:2.170.260.10	Gene3D:3.40.50.2300	MapMan:35.1	UniProt:A0A0P0VLZ4	InterPro:ArgoL1	ProteinID:BAS79778.1
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0031047	InterPro:IPR003100	EnsemblPlantsGene:Os02g0616300	EnsemblPlants:Os02t0616300-00	InterPro:PAZ_dom	InterPro:PAZ_dom_sf
PFAM:PF02170	PFAM:PF08699	PFscan:PS50821	PANTHER:PTHR22891	PANTHER:PTHR22891:SF24	SMART:SM00949
SMART:SM01163	SUPFAM:SSF101690	UniParc:UPI000393A684	:	:	:

Description

Similar to Protein argonaute MEL1. (Os02t0616300-00)

Coordinates

chr2:-:24391316..24406611

Molecular Weight (calculated)

37679.2 Da

IEP (calculated)

9.485

GRAVY (calculated)

-0.093

Length

331 amino acids

Sequence
(BLAST)

001: VNYQHIEVIV NYKPTFVIIS SATLNYQYCL AILLLTFSSY SCLSAPGTIF STKFGPIIDT QEGLEFWRGC YKGVRLSQFG PGLNIDIPAA PFYKPLPVVE
101: FVAELLNRTD VNQLFSTEEY DKVEKALQGV FVETTHRTDK TIRYKIKGLS VVPLEDLMFA EGAKENFTTT VVDYFQKRYK YKLKYIYWPC LQCGSSRDIF
201: LPMEVCKILP GQRYCRKLTT RQAAKLLKAT CERPHIRKIA IMKVRNNCNV ERCVEEFGIR VNGLPAIVCG RILPTPELKY HVSGNEKTCV PTGGRWNMIN
301: KKLVNGGKVE RWACLNFSKV PASTVKIFCG K

Best Arabidopsis Sequence Match ( AT1G48410.1 )
(BLAST)

0001: MVRKRRTDAP SEGGEGSGSR EAGPVSGGGR GSQRGGFQQG GGQHQGGRGY TPQPQQGGRG GRGYGQPPQQ QQQYGGPQEY QGRGRGGPPH QGGRGGYGGG
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC

Arabidopsis Description

AGO1ICU9 [Source:UniProtKB/TrEMBL;Acc:A0A178WL72]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.