Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G061600.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 60.77 | 98.48 |
| Os02t0616300-00 | Rice | vacuole | 20.37 | 52.57 |
| TraesCS5A01G446000.1 | Wheat | cytosol | 46.02 | 46.29 |
| TraesCS2A01G258200.1 | Wheat | cytosol | 34.54 | 44.29 |
| TraesCS4A01G288300.1 | Wheat | plastid | 43.79 | 43.64 |
| VIT_08s0007g04360.t01 | Wine grape | endoplasmic reticulum, golgi, vacuole | 42.04 | 42.19 |
| TraesCS4A01G288000.1 | Wheat | cytosol | 34.43 | 41.0 |
| KRH25139 | Soybean | plastid | 43.68 | 38.81 |
| TraesCS2A01G258100.1 | Wheat | mitochondrion | 38.88 | 37.9 |
| TraesCS2A01G168900.1 | Wheat | cytosol | 46.02 | 37.9 |
| CDX71410 | Canola | nucleus | 42.15 | 37.82 |
| CDY04517 | Canola | plastid | 42.15 | 37.62 |
| KRH30536 | Soybean | plastid | 38.99 | 37.42 |
| TraesCS7A01G371200.2 | Wheat | cytosol | 42.04 | 37.32 |
| Bra011993.1-P | Field mustard | plastid | 42.15 | 37.27 |
| VIT_06s0061g01040.t01 | Wine grape | mitochondrion, nucleus | 44.73 | 37.02 |
| TraesCS6A01G178100.2 | Wheat | plastid | 40.75 | 36.71 |
| AT2G27880.1 | Thale cress | cytosol, nucleus, plastid | 41.57 | 35.61 |
| PGSC0003DMT400018363 | Potato | cytosol, nucleus, plastid | 42.15 | 35.12 |
| Solyc06g074730.2.1 | Tomato | nucleus | 41.33 | 34.92 |
| TraesCS7A01G557400.1 | Wheat | plastid | 41.69 | 34.5 |
| TraesCS6A01G254600.2 | Wheat | plastid | 42.74 | 33.64 |
| TraesCS2A01G403100.4 | Wheat | nucleus | 43.79 | 33.39 |
| TraesCS7A01G521000.1 | Wheat | nucleus | 29.16 | 30.7 |
| TraesCS7A01G040700.5 | Wheat | endoplasmic reticulum, golgi, vacuole | 43.33 | 30.58 |
| TraesCS2A01G414800.1 | Wheat | nucleus | 33.02 | 30.19 |
| TraesCS3A01G188400.1 | Wheat | nucleus | 31.97 | 29.8 |
| TraesCS5A01G165900.1 | Wheat | cytosol | 30.8 | 29.78 |
| TraesCS3A01G116800.1 | Wheat | nucleus | 36.77 | 29.71 |
| TraesCS2A01G419800.2 | Wheat | nucleus | 24.36 | 29.5 |
| TraesCS7A01G533100.1 | Wheat | cytosol | 30.91 | 29.3 |
| TraesCS1A01G445500.1 | Wheat | golgi, unclear | 31.15 | 28.76 |
| TraesCS2A01G419900.1 | Wheat | nucleus | 29.39 | 23.93 |
| TraesCS2A01G419500.1 | Wheat | nucleus | 25.88 | 20.75 |
Protein Annotations
| Gene3D:2.170.260.10 | Gene3D:3.30.420.10 | Gene3D:3.40.50.2300 | MapMan:35.1 | InterPro:Argonaute_Mid_dom | InterPro:Argonaute_N |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR003100 | InterPro:IPR003165 |
| InterPro:IPR036397 | InterPro:PAZ_dom | InterPro:PAZ_dom_sf | PFAM:PF02170 | PFAM:PF02171 | PFAM:PF16486 |
| PFAM:PF16487 | PFscan:PS50821 | PFscan:PS50822 | PANTHER:PTHR22891 | PANTHER:PTHR22891:SF24 | InterPro:Piwi |
| InterPro:RNaseH-like_sf | InterPro:RNaseH_sf | SMART:SM00949 | SMART:SM00950 | SUPFAM:SSF101690 | SUPFAM:SSF53098 |
| EnsemblPlantsGene:TraesCS7A01G067500 | EnsemblPlants:TraesCS7A01G067500.2 | TIGR:cd02846 | TIGR:cd04657 | SEG:seg | : |
Description
No Description!
Coordinates
chr7A:+:33883985..33893081
Molecular Weight (calculated)
96170.3 Da
IEP (calculated)
7.995
GRAVY (calculated)
-0.151
Length
854 amino acids
Sequence
(BLAST)
(BLAST)
001: MNDSNMIKRA ERPGFCLIGS KVVVLVNRYI TYFCPETIIN MYKFSVTPET KSKAIKGALV EELTKTSLGN KVIAFDGMHI YTITLFPSEY EKEYVIELNE
101: GASEDASRSV SYSVTIHLAK SLKMQELKDY YNGEQSYVSQ DILHAINVVL RALSSSCLNA PRAMFSIKFG PIIDIKEGLE LWQGCYKGVC LSHYGLDLTI
201: DTTVAPFYKS ISMVKFVGEF LGRTDFNRAF SHKEYAKIER ALKGVQVETI HHTDRTMKYR IKGLSVVPLK ELMFSVDDDG IMTTVVDYYQ SRYNCKLEYI
301: HWPSLQCGVS GRQIYLPMEV CKLVQGQRYR QKLSTTQAAK LLKITCKRPQ NRLNGILKAA RGNFDVEELT EGEFSASGFP KVLYGSVLSA PLLKYGNEEI
401: FMPIGGQWNM ANKKIIDGGK VERWACLNFS KVPALEVDNF CSELINMCNK IGMVFEGKPL AVQQSSNFMD IQSALESLLS YISELFTDEG NCQRLQLLIV
501: VLPEEKGHYG TIKRICETQL GIVSQCCLPK YVKAKVNVEY LENVALKINV KAGGRNAILQ EGLPFLSDIP TIIFGADVSH PPPGVYSSSV SAVVASMDWP
601: EVATYRCVIS AQQPKQEIIT NLFQVTQDSN GCVKTDSMIK ELLLNFYQKN RRKPERIIFY RDGVSESQFS PVLLHEVDAI RKACISLDEH YVPPITFLVV
701: QKRHQTRLFP MPTTRKPEPK GIRKPEPKGI LPGTVVDYGI CDPCGFDFYL TSHASEGSCR PTHYHVLFDE NRFTAGALQS ITYNLCYTYA RCTRSVSIVP
801: PVYYAHLAAS RGRSYQGNFG DGSSIRETTP GDELPEFLQV PKIHENVSEV MFYC
101: GASEDASRSV SYSVTIHLAK SLKMQELKDY YNGEQSYVSQ DILHAINVVL RALSSSCLNA PRAMFSIKFG PIIDIKEGLE LWQGCYKGVC LSHYGLDLTI
201: DTTVAPFYKS ISMVKFVGEF LGRTDFNRAF SHKEYAKIER ALKGVQVETI HHTDRTMKYR IKGLSVVPLK ELMFSVDDDG IMTTVVDYYQ SRYNCKLEYI
301: HWPSLQCGVS GRQIYLPMEV CKLVQGQRYR QKLSTTQAAK LLKITCKRPQ NRLNGILKAA RGNFDVEELT EGEFSASGFP KVLYGSVLSA PLLKYGNEEI
401: FMPIGGQWNM ANKKIIDGGK VERWACLNFS KVPALEVDNF CSELINMCNK IGMVFEGKPL AVQQSSNFMD IQSALESLLS YISELFTDEG NCQRLQLLIV
501: VLPEEKGHYG TIKRICETQL GIVSQCCLPK YVKAKVNVEY LENVALKINV KAGGRNAILQ EGLPFLSDIP TIIFGADVSH PPPGVYSSSV SAVVASMDWP
601: EVATYRCVIS AQQPKQEIIT NLFQVTQDSN GCVKTDSMIK ELLLNFYQKN RRKPERIIFY RDGVSESQFS PVLLHEVDAI RKACISLDEH YVPPITFLVV
701: QKRHQTRLFP MPTTRKPEPK GIRKPEPKGI LPGTVVDYGI CDPCGFDFYL TSHASEGSCR PTHYHVLFDE NRFTAGALQS ITYNLCYTYA RCTRSVSIVP
801: PVYYAHLAAS RGRSYQGNFG DGSSIRETTP GDELPEFLQV PKIHENVSEV MFYC
0001: MVRKRRTDAP SEGGEGSGSR EAGPVSGGGR GSQRGGFQQG GGQHQGGRGY TPQPQQGGRG GRGYGQPPQQ QQQYGGPQEY QGRGRGGPPH QGGRGGYGGG
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRIRYIPVGR SFYSPDIGKK QSLGDGLESW RGFYQSIRPT QMGLSLNIDM SSTAFIEANP VIQFVCDLLN
0401: RDISSRPLSD ADRVKIKKAL RGVKVEVTHR GNMRRKYRIS GLTAVATREL TFPVDERNTQ KSVVEYFHET YGFRIQHTQL PCLQVGNSNR PNYLPMEVCK
0501: IVEGQRYSKR LNERQITALL KVTCQRPIDR EKDILQTVQL NDYAKDNYAQ EFGIKISTSL ASVEARILPP PWLKYHESGR EGTCLPQVGQ WNMMNKKMIN
0601: GGTVNNWICI NFSRQVQDNL ARTFCQELAQ MCYVSGMAFN PEPVLPPVSA RPEQVEKVLK TRYHDATSKL SQGKEIDLLI VILPDNNGSL YGDLKRICET
0701: ELGIVSQCCL TKHVFKMSKQ YMANVALKIN VKVGGRNTVL VDALSRRIPL VSDRPTIIFG ADVTHPHPGE DSSPSIAAVV ASQDWPEITK YAGLVCAQAH
0801: RQELIQDLFK EWKDPQKGVV TGGMIKELLI AFRRSTGHKP LRIIFYRDGV SEGQFYQVLL YELDAIRKAC ASLEAGYQPP VTFVVVQKRH HTRLFAQNHN
0901: DRHSVDRSGN ILPGTVVDSK ICHPTEFDFY LCSHAGIQGT SRPAHYHVLW DENNFTADGL QSLTNNLCYT YARCTRSVSI VPPAYYAHLA AFRARFYMEP
1001: ETSDSGSMAS GSMARGGGMA GRSTRGPNVN AAVRPLPALK ENVKRVMFYC
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRIRYIPVGR SFYSPDIGKK QSLGDGLESW RGFYQSIRPT QMGLSLNIDM SSTAFIEANP VIQFVCDLLN
0401: RDISSRPLSD ADRVKIKKAL RGVKVEVTHR GNMRRKYRIS GLTAVATREL TFPVDERNTQ KSVVEYFHET YGFRIQHTQL PCLQVGNSNR PNYLPMEVCK
0501: IVEGQRYSKR LNERQITALL KVTCQRPIDR EKDILQTVQL NDYAKDNYAQ EFGIKISTSL ASVEARILPP PWLKYHESGR EGTCLPQVGQ WNMMNKKMIN
0601: GGTVNNWICI NFSRQVQDNL ARTFCQELAQ MCYVSGMAFN PEPVLPPVSA RPEQVEKVLK TRYHDATSKL SQGKEIDLLI VILPDNNGSL YGDLKRICET
0701: ELGIVSQCCL TKHVFKMSKQ YMANVALKIN VKVGGRNTVL VDALSRRIPL VSDRPTIIFG ADVTHPHPGE DSSPSIAAVV ASQDWPEITK YAGLVCAQAH
0801: RQELIQDLFK EWKDPQKGVV TGGMIKELLI AFRRSTGHKP LRIIFYRDGV SEGQFYQVLL YELDAIRKAC ASLEAGYQPP VTFVVVQKRH HTRLFAQNHN
0901: DRHSVDRSGN ILPGTVVDSK ICHPTEFDFY LCSHAGIQGT SRPAHYHVLW DENNFTADGL QSLTNNLCYT YARCTRSVSI VPPAYYAHLA AFRARFYMEP
1001: ETSDSGSMAS GSMARGGGMA GRSTRGPNVN AAVRPLPALK ENVKRVMFYC
Arabidopsis Description
AGO1ICU9 [Source:UniProtKB/TrEMBL;Acc:A0A178WL72]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.