Factsheet for TraesCS2A01G419800.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G438600.1	Wheat	cytosol, nucleus, plastid	85.11	74.72
HORVU2Hr1G098620.2	Barley	nucleus	80.85	55.94
TraesCS2A01G419500.1	Wheat	nucleus	68.94	45.63
KRH36727	Soybean	nucleus	25.11	39.07
TraesCS2A01G419900.1	Wheat	nucleus	55.46	37.27
PGSC0003DMT400054667	Potato	cytosol	36.45	35.21
CDY70429	Canola	plastid	37.59	29.88
TraesCS2A01G258200.1	Wheat	cytosol	27.94	29.58
KRG89432	Soybean	nucleus	40.28	29.4
VIT_10s0042g01180.t01	Wine grape	nucleus, plastid	39.01	29.01
VIT_10s0042g01150.t01	Wine grape	nucleus	40.0	28.8
VIT_10s0042g01200.t01	Wine grape	nucleus	40.14	28.47
Solyc02g069270.2.1	Tomato	cytosol	39.01	28.15
Solyc02g069280.2.1	Tomato	nucleus	38.01	26.83
Solyc02g069260.2.1	Tomato	nucleus	39.29	26.58
KRH11732	Soybean	nucleus	38.72	26.33
PGSC0003DMT400054669	Potato	cytosol	39.01	26.17
AT1G31280.1	Thale cress	nucleus	37.59	26.13
CDY02373	Canola	nucleus	37.59	25.9
Bra040815.1-P	Field mustard	cytosol	36.88	25.77
Bra023172.1-P	Field mustard	nucleus	37.87	25.75
CDY25885	Canola	cytosol	36.88	25.74
TraesCS4A01G288000.1	Wheat	cytosol	25.96	25.52
TraesCS5A01G446000.1	Wheat	cytosol	30.21	25.09
CDY55876	Canola	cytosol	36.17	24.64
TraesCS2A01G414800.1	Wheat	nucleus	32.34	24.41
TraesCS7A01G067500.2	Wheat	cytosol	29.5	24.36
PGSC0003DMT400054661	Potato	nucleus	33.76	24.29
TraesCS4A01G288300.1	Wheat	plastid	28.94	23.8
TraesCS2A01G258100.1	Wheat	mitochondrion	27.94	22.49
TraesCS7A01G371200.2	Wheat	cytosol	29.79	21.83
TraesCS5A01G165900.1	Wheat	cytosol	27.09	21.63
TraesCS7A01G521000.1	Wheat	nucleus	24.82	21.58
TraesCS6A01G178100.2	Wheat	plastid	28.79	21.41
TraesCS7A01G557400.1	Wheat	plastid	30.78	21.03
AT1G31290.1	Thale cress	nucleus	35.6	21.02
TraesCS3A01G188400.1	Wheat	nucleus	26.81	20.63
TraesCS7A01G533100.1	Wheat	cytosol	25.82	20.2
TraesCS2A01G168900.1	Wheat	cytosol	29.5	20.06
TraesCS1A01G445500.1	Wheat	golgi, unclear	26.24	20.0
TraesCS6A01G254600.2	Wheat	plastid	29.93	19.45
TraesCS2A01G403100.4	Wheat	nucleus	30.35	19.11
TraesCS3A01G116800.1	Wheat	nucleus	27.94	18.64
TraesCS7A01G040700.5	Wheat	endoplasmic reticulum, golgi, vacuole	30.78	17.93

Protein Annotations

Gene3D:2.170.260.10	Gene3D:3.30.420.10	Gene3D:3.40.50.2300	MapMan:35.1	GO:GO:0003674	GO:GO:0003676
GO:GO:0005488	GO:GO:0005515	InterPro:IPR003100	InterPro:IPR003165	InterPro:IPR036397	InterPro:PAZ_dom
InterPro:PAZ_dom_sf	PFAM:PF02170	PFAM:PF02171	PFscan:PS50821	PFscan:PS50822	PANTHER:PTHR22891
PANTHER:PTHR22891:SF4	InterPro:Piwi	InterPro:RNaseH-like_sf	InterPro:RNaseH_sf	SMART:SM00949	SMART:SM00950
SUPFAM:SSF101690	SUPFAM:SSF53098	EnsemblPlantsGene:TraesCS2A01G419800	EnsemblPlants:TraesCS2A01G419800.2	TIGR:cd02846	SEG:seg

Description

No Description!

Coordinates

chr2A:-:675746757..675749296

Molecular Weight (calculated)

79399.8 Da

IEP (calculated)

8.596

GRAVY (calculated)

-0.471

Length

705 amino acids

Sequence
(BLAST)

001: MQTLKATEQG LVLCVDYSVM EFCRDGSSVM DLVKHLVKRF DTDIPFDMET ALDEKQQKYL ESQLKGLCIT VNYLKKSSKG KDNGTRIRKY KVQGLTAEPA
101: QLITFEDFDS GKPPHKLVEY YREQYEVEIQ YKMLPCLDLS TTNGRPNYVP IELCTLHRRQ KYPKDNTLKG SKQKPKDKPL ESNARKDRIL DMVKPPEGPC
201: SSSRGQQFNI TLNREMTEVT GTILAPPTLT VGSSTGRRDY NITKKNCQWN LMNWMKLVDG KVLKCWGILD FSASATPSHS GQEGPLDGDK FIRNIVRKCL
301: NLGIQMDGQD CVVRRSAMSV LSDPGKLRKE LIQVKKDAEE RTQKKLQLLF CPMSEQHRGY KILKMICETE LGIQTQCLLS HLANKGKGQD QYLSNLALKI
401: NIKLGGSNMQ LSDQLPKVTG SRFMFIGADV NHPPPGDTVS LSIAAVVASM DCPSASQYVP RIRAQKRGTE EIDNLGTMCK ELIQVYMERN GGFKPDKIIY
501: FRDGVSDEQF KMVLDKELVS MEKGICEDDY SPTITVVVAK KRHNTRLFPK DENELQTTNG NVLPGTVVDT VVVDGSHDDF FLCSHDGLHG TSRPTHYYML
601: KNGHGFKPVD LQKLVYSMCF MFARCTKPVS LTAPIKYADT AAYRGRDYYD SRMVSQQFQV QEPGPSSSAS VPAGAPLFRG MPEVHADLHH LMPHAFQHGI
701: SSFFI

Best Arabidopsis Sequence Match ( AT1G31280.1 )
(BLAST)

0001: MERGGYRGGR GDGRGRGGRG YGGGGGGGEQ GRDRGYGGGE QGRGRGSERG GGNRGQGRGE QQDFRSQSQR GPPPGHGGRG TTQFQQPRPQ VAPQPSQAPA
0101: SYAGSVGGVA GRGAWGRKPQ VPSDSASPST STTVVSEPVR VAEVMNLKPS VQVATSDRKE PMKRPDRGGV VAVRRVNLYV NHYKVNFNPE SVIRHYDVEI
0201: KGEIPTKKVS RFELAMVRDK VFTDNPDEFP LAMTAYDGQK NIFSAVELPT GSYKVEYPKT EEMRGRSYTF TIKQVNVLKL GDLKEYMTGR SSFNPRDVLQ
0301: GMDVVMKEHP SKCMITVGKS FFTRETEPDE DFRFGVIAAK GYRHTLKPTA QGLSLCLDYS VLAFRKAMSV IEYLKLYFNW SDMRQFRRRD VEEELIGLKV
0401: TVNHRKNKQK LTIVGLSMQN TKDIKFDLID QEGNEPPRKT SIVEYFRIKY GRHIVHKDIP CLDLGKNGRQ NFVPMEFCDL VEGQIYPKDN LDKDSALWLK
0501: KLSLVNPQQR QRNIDKMIKA RNGPSGGEII GNFGLKVDTN MTPVEGRVLK APSLKLAERG RVVREEPNPR QNNQWNLMKK GVTRGSIVKH WAVLDFTASE
0601: RFNKMPNDFV DNLIDRCWRL GMQMEAPIVY KTSRMETLSN GNAIEELLRS VIDEASRKHG GARPTLVLCA MSRKDDGYKT LKWIAETKLG LVTQCFLTGP
0701: ATKGGDQYRA NLALKMNAKV GGSNVELMDT FSFFKKEDEV MFIGADVNHP AARDKMSPSI VAVVGTLNWP EANRYAARVI AQPHRKEEIQ GFGDACLELV
0801: KAHVQATGKR PNKIVIFRDG VSDAQFDMVL NVELLDVKLT FEKNGYNPKI TVIVAQKRHQ TRFFPATNND GSDKGNVPSG TVVDTKVIHP YEYDFYLCSH
0901: HGGIGTSKPT HYYTLWDELG FTSDQVQKLI FEMCFTFTRC TKPVSLVPPV YYADMVAFRG RMYHEASSRE KNFKQPRGAS TSAASLASSL SSLTIEDKAI
1001: FKLHAELENV MFFV

Arabidopsis Description

AGO2Protein argonaute 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHF3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.