Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G417000.1 | Wheat | nucleus | 98.47 | 98.57 |
| TraesCS2B01G439000.2 | Wheat | nucleus, unclear | 98.09 | 98.37 |
| HORVU2Hr1G098650.1 | Barley | nucleus | 95.14 | 95.32 |
| Os04t0615700-01 | Rice | nucleus, plasma membrane | 72.26 | 73.31 |
| Zm00001d026300_P001 | Maize | nucleus | 60.53 | 72.08 |
| Zm00001d002316_P003 | Maize | plastid | 58.63 | 71.85 |
| KXG27113 | Sorghum | nucleus | 69.78 | 67.03 |
| TraesCS2A01G419800.2 | Wheat | nucleus | 37.27 | 55.46 |
| TraesCS2A01G419500.1 | Wheat | nucleus | 48.62 | 47.89 |
| KRH36727 | Soybean | nucleus | 19.45 | 45.03 |
| PGSC0003DMT400054667 | Potato | cytosol | 29.17 | 41.92 |
| VIT_10s0042g01180.t01 | Wine grape | nucleus, plastid | 37.08 | 41.03 |
| KRG89432 | Soybean | nucleus | 37.56 | 40.79 |
| Solyc02g069270.2.1 | Tomato | cytosol | 37.65 | 40.43 |
| VIT_10s0042g01150.t01 | Wine grape | nucleus | 37.56 | 40.25 |
| CDY70429 | Canola | plastid | 33.08 | 39.12 |
| VIT_10s0042g01200.t01 | Wine grape | nucleus | 36.8 | 38.83 |
| Solyc02g069260.2.1 | Tomato | nucleus | 37.75 | 38.0 |
| PGSC0003DMT400054669 | Potato | cytosol | 37.94 | 37.87 |
| CDY02373 | Canola | nucleus | 36.42 | 37.34 |
| AT1G31280.1 | Thale cress | nucleus | 36.03 | 37.28 |
| Bra023172.1-P | Field mustard | nucleus | 36.7 | 37.13 |
| KRH11732 | Soybean | nucleus | 36.61 | 37.03 |
| Solyc02g069280.2.1 | Tomato | nucleus | 35.18 | 36.94 |
| Bra040815.1-P | Field mustard | cytosol | 35.37 | 36.77 |
| CDY25885 | Canola | cytosol | 35.37 | 36.73 |
| CDY55876 | Canola | cytosol | 36.23 | 36.72 |
| PGSC0003DMT400054661 | Potato | nucleus | 31.65 | 33.88 |
| TraesCS5A01G446000.1 | Wheat | cytosol | 27.26 | 33.69 |
| TraesCS2A01G258200.1 | Wheat | cytosol | 21.35 | 33.63 |
| TraesCS4A01G288000.1 | Wheat | cytosol | 22.78 | 33.33 |
| AT1G31290.1 | Thale cress | nucleus | 37.08 | 32.58 |
| TraesCS4A01G288300.1 | Wheat | plastid | 26.6 | 32.56 |
| TraesCS2A01G414800.1 | Wheat | nucleus | 28.41 | 31.91 |
| TraesCS7A01G371200.2 | Wheat | cytosol | 29.08 | 31.7 |
| TraesCS2A01G168900.1 | Wheat | cytosol | 30.12 | 30.47 |
| TraesCS7A01G557400.1 | Wheat | plastid | 29.84 | 30.33 |
| TraesCS6A01G178100.2 | Wheat | plastid | 27.26 | 30.17 |
| TraesCS5A01G165900.1 | Wheat | cytosol | 24.98 | 29.67 |
| TraesCS7A01G067500.2 | Wheat | cytosol | 23.93 | 29.39 |
| TraesCS3A01G116800.1 | Wheat | nucleus | 29.46 | 29.23 |
| TraesCS2A01G403100.4 | Wheat | nucleus | 31.17 | 29.2 |
| TraesCS6A01G254600.2 | Wheat | plastid | 29.84 | 28.85 |
| TraesCS2A01G258100.1 | Wheat | mitochondrion | 24.02 | 28.77 |
| TraesCS7A01G521000.1 | Wheat | nucleus | 21.83 | 28.24 |
| TraesCS1A01G445500.1 | Wheat | golgi, unclear | 24.4 | 27.68 |
| TraesCS7A01G533100.1 | Wheat | cytosol | 23.74 | 27.64 |
| TraesCS3A01G188400.1 | Wheat | nucleus | 24.02 | 27.51 |
| TraesCS7A01G040700.5 | Wheat | endoplasmic reticulum, golgi, vacuole | 30.98 | 26.86 |
| Os04t0615800-01 | Rice | nucleus | 0.38 | 0.76 |
Protein Annotations
| MapMan:12.5.1.15.2 | Gene3D:2.170.260.10 | Gene3D:3.30.420.10 | Gene3D:3.40.50.2300 | InterPro:ArgoL1 | InterPro:ArgoL2 |
| InterPro:Argonaute_Mid_dom | InterPro:Argonaute_N | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:IPR003100 | InterPro:IPR003165 | InterPro:IPR036397 | InterPro:PAZ_dom | InterPro:PAZ_dom_sf |
| PFAM:PF02170 | PFAM:PF02171 | PFAM:PF08699 | PFAM:PF16486 | PFAM:PF16487 | PFAM:PF16488 |
| PFscan:PS50821 | PFscan:PS50822 | PANTHER:PTHR22891 | PANTHER:PTHR22891:SF4 | InterPro:Piwi | InterPro:RNaseH-like_sf |
| InterPro:RNaseH_sf | SMART:SM00949 | SMART:SM00950 | SMART:SM01163 | SUPFAM:SSF101690 | SUPFAM:SSF53098 |
| EnsemblPlantsGene:TraesCS2A01G419900 | EnsemblPlants:TraesCS2A01G419900.1 | TIGR:cd02846 | TIGR:cd04657 | SEG:seg | : |
Description
No Description!
Coordinates
chr2A:-:675896377..675900970
Molecular Weight (calculated)
113472.0 Da
IEP (calculated)
9.684
GRAVY (calculated)
-0.398
Length
1049 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDYEQGGGAG RGRGRSRGGV GGRGGAPGGY GPQGGGGGYG GGGQGRGAQG SGGGYGGGGG YAPQGGMEGR GGGYAPRGGG YAPRGGGEGR GRGYGPQGGG
0101: EGRGGDYGGG GPGGRGPGGG GRGYGPGGGR GGNAWAQPGR GPAGGPGEYV PVRAPAPASA ARRVESEEAG RSSGSVERIS SKEVAKLEPL APPVAVSPNG
0201: IRVPMQRPDG GGTLCQARVQ LLVNHFIVKY PKLSTFFHYD IDIKFDPASS KVSGKELSNA DFLSAKAELF KDDSFRQLSS AVAYDGKRNL FTVAQLPEGL
0301: FRVRVSSKTY IVSVEFKKQL PLSQLSELPV AREILQGLDV IVREASSWSK IILGHGFYSP QSKVDMGSGV VSMKGTQQTL KHTQQGLVLC VDYSVMPFRR
0401: DGPVLDIVRQ FIKPLPLDYR TALNKTHREK LVYELKGQRV NVSHRKTKQK YTIQGFTDLP ASQITFLDSE SGQSRKLVDY FAQQYGKVIE YQMLPCLDLS
0501: KSKDKPNYVP IELCKLIEGQ RYPMANLNKD TDRALKGKAL IKAAERKWEI ETAVKAEDGP CRGEIAQQFG ISLDVKMMEV TGRVLSPPML TLGSSRGAPG
0601: NLSITPSNCQ WNLMGKKLVE GKALQCWGIV DFSARPSHNK QQALDGNMFI NYIVRKCCDL GIQMNKTACF VHLSTMSVLS DPHQLYEELN KAKQAAVKKN
0701: QKLQLLFCPM SEQHPGYKTL KLICETQLGI QTQCFLSHLA NKTQGQDQYM SNLALKINSK LGGINVQLQD KLPLDNGVPY MFIGADVNHP SPGNVESPSI
0801: AAVVASMNRG ATKYVPRIRA QPHRCEVIKN LGEIVQELIG VFEKKAGVKP QKIIYFRDGV SDGQFEMVLN EELADMEKVI KVKGYSPTIT VIVAKKRHHT
0901: RLFPKEHNEP LQTKNGNVLP GTVVDTRIVD PVTYDFYLCS HNGLIGTSRP THYYNLMDEH GYGSDDLQRL VYNLCFVFAR CTKPVSLATP VYYADLAAYR
1001: GRLYYEGMLA SQPQVRSSSS SASSAAAGAS DFSNFPMLHV DLQDNMFFI
0101: EGRGGDYGGG GPGGRGPGGG GRGYGPGGGR GGNAWAQPGR GPAGGPGEYV PVRAPAPASA ARRVESEEAG RSSGSVERIS SKEVAKLEPL APPVAVSPNG
0201: IRVPMQRPDG GGTLCQARVQ LLVNHFIVKY PKLSTFFHYD IDIKFDPASS KVSGKELSNA DFLSAKAELF KDDSFRQLSS AVAYDGKRNL FTVAQLPEGL
0301: FRVRVSSKTY IVSVEFKKQL PLSQLSELPV AREILQGLDV IVREASSWSK IILGHGFYSP QSKVDMGSGV VSMKGTQQTL KHTQQGLVLC VDYSVMPFRR
0401: DGPVLDIVRQ FIKPLPLDYR TALNKTHREK LVYELKGQRV NVSHRKTKQK YTIQGFTDLP ASQITFLDSE SGQSRKLVDY FAQQYGKVIE YQMLPCLDLS
0501: KSKDKPNYVP IELCKLIEGQ RYPMANLNKD TDRALKGKAL IKAAERKWEI ETAVKAEDGP CRGEIAQQFG ISLDVKMMEV TGRVLSPPML TLGSSRGAPG
0601: NLSITPSNCQ WNLMGKKLVE GKALQCWGIV DFSARPSHNK QQALDGNMFI NYIVRKCCDL GIQMNKTACF VHLSTMSVLS DPHQLYEELN KAKQAAVKKN
0701: QKLQLLFCPM SEQHPGYKTL KLICETQLGI QTQCFLSHLA NKTQGQDQYM SNLALKINSK LGGINVQLQD KLPLDNGVPY MFIGADVNHP SPGNVESPSI
0801: AAVVASMNRG ATKYVPRIRA QPHRCEVIKN LGEIVQELIG VFEKKAGVKP QKIIYFRDGV SDGQFEMVLN EELADMEKVI KVKGYSPTIT VIVAKKRHHT
0901: RLFPKEHNEP LQTKNGNVLP GTVVDTRIVD PVTYDFYLCS HNGLIGTSRP THYYNLMDEH GYGSDDLQRL VYNLCFVFAR CTKPVSLATP VYYADLAAYR
1001: GRLYYEGMLA SQPQVRSSSS SASSAAAGAS DFSNFPMLHV DLQDNMFFI
0001: MVRKRRTDAP SEGGEGSGSR EAGPVSGGGR GSQRGGFQQG GGQHQGGRGY TPQPQQGGRG GRGYGQPPQQ QQQYGGPQEY QGRGRGGPPH QGGRGGYGGG
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC
Arabidopsis Description
AGO1ICU9 [Source:UniProtKB/TrEMBL;Acc:A0A178WL72]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.