Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 2
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G166300.1 | Wheat | plastid | 96.84 | 96.53 |
| TraesCS6B01G206700.1 | Wheat | plastid | 95.89 | 95.89 |
| HORVU6Hr1G036840.2 | Barley | plastid | 94.94 | 94.84 |
| TraesCS7A01G371200.2 | Wheat | cytosol | 78.16 | 77.03 |
| GSMUA_Achr4P30720_001 | Banana | nucleus | 74.05 | 75.24 |
| GSMUA_Achr6P05310_001 | Banana | nucleus | 73.42 | 75.0 |
| GSMUA_Achr7P13220_001 | Banana | cytosol | 69.94 | 70.08 |
| VIT_11s0016g04620.t01 | Wine grape | cytosol | 66.03 | 69.17 |
| KRH03770 | Soybean | nucleus | 65.19 | 68.44 |
| KRH54842 | Soybean | nucleus | 65.4 | 68.21 |
| KRH56656 | Soybean | cytosol | 65.3 | 68.17 |
| KRH63036 | Soybean | cytosol | 65.3 | 68.1 |
| Solyc12g006790.1.1 | Tomato | nucleus | 65.19 | 66.24 |
| PGSC0003DMT400053301 | Potato | nucleus | 63.19 | 65.11 |
| TraesCS7A01G557400.1 | Wheat | plastid | 61.5 | 56.49 |
| TraesCS2A01G258200.1 | Wheat | cytosol | 39.56 | 56.31 |
| TraesCS6A01G254600.2 | Wheat | plastid | 63.71 | 55.67 |
| TraesCS2A01G403100.4 | Wheat | nucleus | 65.61 | 55.54 |
| TraesCS5A01G446000.1 | Wheat | cytosol | 49.16 | 54.89 |
| TraesCS4A01G288300.1 | Wheat | plastid | 49.58 | 54.84 |
| TraesCS4A01G288000.1 | Wheat | cytosol | 39.56 | 52.3 |
| TraesCS7A01G040700.5 | Wheat | endoplasmic reticulum, golgi, vacuole | 65.72 | 51.49 |
| TraesCS2A01G258100.1 | Wheat | mitochondrion | 45.04 | 48.74 |
| TraesCS2A01G168900.1 | Wheat | cytosol | 49.37 | 45.13 |
| TraesCS3A01G116800.1 | Wheat | nucleus | 45.46 | 40.78 |
| TraesCS7A01G067500.2 | Wheat | cytosol | 36.71 | 40.75 |
| TraesCS7A01G521000.1 | Wheat | nucleus | 29.85 | 34.9 |
| TraesCS5A01G165900.1 | Wheat | cytosol | 32.28 | 34.65 |
| TraesCS7A01G533100.1 | Wheat | cytosol | 32.59 | 34.3 |
| TraesCS2A01G414800.1 | Wheat | nucleus | 33.23 | 33.73 |
| TraesCS3A01G188400.1 | Wheat | nucleus | 32.38 | 33.52 |
| TraesCS1A01G445500.1 | Wheat | golgi, unclear | 32.38 | 33.19 |
| TraesCS2A01G419800.2 | Wheat | nucleus | 21.41 | 28.79 |
| TraesCS2A01G419900.1 | Wheat | nucleus | 30.17 | 27.26 |
| TraesCS2A01G419500.1 | Wheat | nucleus | 25.32 | 22.54 |
Protein Annotations
| MapMan:16.10.3 | Gene3D:2.170.260.10 | Gene3D:3.30.420.10 | Gene3D:3.40.50.2300 | InterPro:ArgoL1 | InterPro:ArgoL2 |
| InterPro:Argonaute_Mid_dom | InterPro:Argonaute_N | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR003100 | InterPro:IPR003165 | InterPro:IPR036397 | InterPro:PAZ_dom | InterPro:PAZ_dom_sf | PFAM:PF02170 |
| PFAM:PF02171 | PFAM:PF08699 | PFAM:PF16486 | PFAM:PF16487 | PFAM:PF16488 | PFscan:PS50821 |
| PFscan:PS50822 | PANTHER:PTHR22891 | PANTHER:PTHR22891:SF45 | InterPro:Piwi | InterPro:RNaseH-like_sf | InterPro:RNaseH_sf |
| SMART:SM00949 | SMART:SM00950 | SMART:SM01163 | SUPFAM:SSF101690 | SUPFAM:SSF53098 | EnsemblPlantsGene:TraesCS6A01G178100 |
| EnsemblPlants:TraesCS6A01G178100.2 | TIGR:cd02846 | TIGR:cd04657 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr6A:-:199810662..199817718
Molecular Weight (calculated)
105776.0 Da
IEP (calculated)
9.666
GRAVY (calculated)
-0.315
Length
948 amino acids
Sequence
(BLAST)
(BLAST)
001: MLEVLEVPWT VVGGKAAGGC PGPPRRQALQ SSLAHPKAAT RSPGAGCKKC NSGASGPRRN GARARSKEEA VVPAACTGVV AVAPAEPPPV SSKGLELCRR
101: PGFGKAGTRC VVKANHFLAE VADKDLTQYD VKITPEVRSR SVSRAIVAEL VRLYRASDLG MRLPAYDGRS NLYTAGRLPF DAREFVIRLA VDDDGVSSAT
201: VREKEYKVAI KFAAGADLRH LREFMAGRQP DEPQGGLQVL DVVLREVASQ RYLSVRRSFY SPDIRTPQRL GDGLQSWFGF YQSIRPTQMG LSLNIDMSST
301: AFVEPLPVID FAAQILGKDV MSRPLSDANR VRIKKALHDL KVEITHRGSL RRKYRVFGLT AQPTHELIFP IDDEVKSVVE YFKEMYGFTI KQPHLPCLLV
401: GNQKKPNYLP MEVCKIVEGQ RYKKRLNEKQ ITSLLKVTCQ RPGDKEMDIR RTVHKNGYDQ DPYAKEFGIN ISDKLTSIEA RVLPAPWLKY HDTGKESECL
501: PRVGQWDMKN KKVVNGCTVN HWASINFSRS VQESTASGFC QELAQTCKLL GMEFNSEPAI PMYSARPEQA VQALKHVYNA ALKKPKGKEL ELLLVILPDN
601: NGALYGDIKR ICETELGIMS QCCLAKHVFK ICKRYLANVS LKINVKMGGR NTVLLDAVSR RIPLVSDVPT IIFGADVTHP ETREDTSPSI AAVVASQDWP
701: EVTKYAGLVC AQAYRQELIQ DLYKTWHDPQ RGTVTGGMIR ELLISFRKAT GQKPLRIIFY RDGVSAGQFH QVLLYELDAI RKACASLEPN YQPPVTFVIV
801: QKRHHTKLFA NNHNDKSSTD KSGNILPGTV VDSKICHPTQ FDFYLCSHAG IQGTSKPAHY HVLWDENNFM ADEMQTLTNN LCYTYVRCTR SVSVAVPPVY
901: YAHLAAFRAR FYMDQDSLSV KNANGRNGGA MKTMPAVKER VKRVMFYC
101: PGFGKAGTRC VVKANHFLAE VADKDLTQYD VKITPEVRSR SVSRAIVAEL VRLYRASDLG MRLPAYDGRS NLYTAGRLPF DAREFVIRLA VDDDGVSSAT
201: VREKEYKVAI KFAAGADLRH LREFMAGRQP DEPQGGLQVL DVVLREVASQ RYLSVRRSFY SPDIRTPQRL GDGLQSWFGF YQSIRPTQMG LSLNIDMSST
301: AFVEPLPVID FAAQILGKDV MSRPLSDANR VRIKKALHDL KVEITHRGSL RRKYRVFGLT AQPTHELIFP IDDEVKSVVE YFKEMYGFTI KQPHLPCLLV
401: GNQKKPNYLP MEVCKIVEGQ RYKKRLNEKQ ITSLLKVTCQ RPGDKEMDIR RTVHKNGYDQ DPYAKEFGIN ISDKLTSIEA RVLPAPWLKY HDTGKESECL
501: PRVGQWDMKN KKVVNGCTVN HWASINFSRS VQESTASGFC QELAQTCKLL GMEFNSEPAI PMYSARPEQA VQALKHVYNA ALKKPKGKEL ELLLVILPDN
601: NGALYGDIKR ICETELGIMS QCCLAKHVFK ICKRYLANVS LKINVKMGGR NTVLLDAVSR RIPLVSDVPT IIFGADVTHP ETREDTSPSI AAVVASQDWP
701: EVTKYAGLVC AQAYRQELIQ DLYKTWHDPQ RGTVTGGMIR ELLISFRKAT GQKPLRIIFY RDGVSAGQFH QVLLYELDAI RKACASLEPN YQPPVTFVIV
801: QKRHHTKLFA NNHNDKSSTD KSGNILPGTV VDSKICHPTQ FDFYLCSHAG IQGTSKPAHY HVLWDENNFM ADEMQTLTNN LCYTYVRCTR SVSVAVPPVY
901: YAHLAAFRAR FYMDQDSLSV KNANGRNGGA MKTMPAVKER VKRVMFYC
0001: MVRKRRTDAP SEGGEGSGSR EAGPVSGGGR GSQRGGFQQG GGQHQGGRGY TPQPQQGGRG GRGYGQPPQQ QQQYGGPQEY QGRGRGGPPH QGGRGGYGGG
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC
Arabidopsis Description
AGO1ICU9 [Source:UniProtKB/TrEMBL;Acc:A0A178WL72]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.