CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
plasma membrane 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH56656	Soybean	cytosol	96.79	96.26
KRH63036	Soybean	cytosol	89.7	89.11
KRH54842	Soybean	nucleus	89.7	89.11
KRG99173	Soybean	cytosol	13.73	79.49
VIT_11s0016g04620.t01	Wine grape	cytosol	79.07	78.89
Solyc12g006790.1.1	Tomato	nucleus	75.75	73.31
GSMUA_Achr6P05310_001	Banana	nucleus	74.42	72.41
PGSC0003DMT400053301	Potato	nucleus	73.53	72.17
GSMUA_Achr4P30720_001	Banana	nucleus	74.53	72.13
TraesCS7D01G351700.1	Wheat	cytosol	74.09	70.27
GSMUA_Achr7P13220_001	Banana	cytosol	73.53	70.19
Zm00001d036917_P009	Maize	nucleus	74.86	69.98
TraesCS7B01G256500.1	Wheat	cytosol	73.98	69.87
TraesCS7A01G371200.2	Wheat	cytosol	74.09	69.54
Os06t0597400-01	Rice	cytosol	74.86	69.05
KXG20286	Sorghum	cytosol	74.86	68.91
KRH31645	Soybean	nucleus	72.09	68.6
KRH69078	Soybean	cytosol	73.31	68.11
KRG91384	Soybean	cytosol	73.42	68.07
KRH35431	Soybean	cytosol	72.76	67.45
Zm00001d046438_P003	Maize	cytosol	74.86	67.26
TraesCS6B01G206700.1	Wheat	plastid	68.88	65.61
TraesCS6D01G166300.1	Wheat	plastid	68.99	65.51
HORVU6Hr1G036840.2	Barley	plastid	68.66	65.33
TraesCS6A01G178100.2	Wheat	plastid	68.44	65.19
KRH09472	Soybean	nucleus	69.55	59.64
KRH38925	Soybean	endoplasmic reticulum	69.77	59.55
KRH25139	Soybean	plastid	52.38	49.22
KRH30536	Soybean	plastid	48.39	49.1
KRH14678	Soybean	nucleus	34.33	34.22
KRG89867	Soybean	nucleus	35.66	34.0
KRH73469	Soybean	nucleus	34.11	34.0
KRH70802	Soybean	nucleus	38.1	33.37
KRH74941	Soybean	nucleus	37.87	33.24
KRH20672	Soybean	nucleus	33.22	32.86
KRH36727	Soybean	nucleus	15.5	30.91
KRG89432	Soybean	nucleus	31.89	29.81
KRH56276	Soybean	cytosol	26.25	28.52
KRH11732	Soybean	nucleus	32.34	28.16

Protein Annotations

EntrezGene:100798086	MapMan:16.10.3	Gene3D:2.170.260.10	Gene3D:3.30.420.10	Gene3D:3.40.50.2300	EMBL:ACUP02010360
InterPro:ArgoL1	InterPro:ArgoL2	InterPro:Argonaute_Mid_dom	InterPro:Argonaute_N	EnsemblPlantsGene:GLYMA_17G119400	GO:GO:0003674
GO:GO:0003676	GO:GO:0005488	GO:GO:0005515	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0031047	UniProt:I1MUE1	InterPro:IPR003100	InterPro:IPR003165	InterPro:IPR036397	ProteinID:KRH03768.1
ProteinID:KRH03769.1	EnsemblPlants:KRH03770	ProteinID:KRH03770	ProteinID:KRH03770.1	ProteinID:KRH03771.1	ProteinID:KRH03772.1
ProteinID:KRH03773.1	InterPro:PAZ_dom	InterPro:PAZ_dom_sf	PFAM:PF02170	PFAM:PF02171	PFAM:PF08699
PFAM:PF16486	PFAM:PF16487	PFAM:PF16488	PFscan:PS50821	PFscan:PS50822	PANTHER:PTHR22891
PANTHER:PTHR22891:SF104	InterPro:Piwi	InterPro:RNaseH-like_sf	InterPro:RNaseH_sf	SMART:SM00949	SMART:SM00950
SMART:SM01163	SUPFAM:SSF101690	SUPFAM:SSF53098	UniParc:UPI00023D6205	SEG:seg	:

Description

hypothetical protein

Coordinates

chr17:-:9422086..9440192

Molecular Weight (calculated)

102413.0 Da

IEP (calculated)

9.143

GRAVY (calculated)

-0.339

Length

903 amino acids

Sequence
(BLAST)

001: MKDPVEDQVK SRRAVQKPKD FRRRDRRRNQ CKQEKLQDTQ LVSSACKSLV FPARPGYGQL GTKCLVKANH FLADISASDL SHYNVKITPE VTSRKTSKAI
101: IAELVRLHRN TDLAMKLPVY DGGRNLYTAG LLSFAYKEFT ILLREDDEGT GSTREREFEV VIRFAARVSM NQLRELLSGK QVDTPQEALT VIDTVLRELA
201: AQSYVSIGRF LYSPDLRKPQ QLGGGLESWC GFYQSIRPTQ MGLSLNIDMS SMAFIEPLPV IDFVAQILGK DVLSKPLSDA DRVKIKKALR GVKVEVTHRG
301: SFRRKYRITG LTSQPTRELN FPVDEKMNMK SVVDYFQEMY GYTIIYSHLP CLQVGSQKKV NYLPMEACKI VGGQRYTKGL NEKQITSLLK VSCQRPREQE
401: TDILQTIHQN DYEYNPYAKE FGISIDSKLA SVEARVLPAP WLKYHETGRE KEYLPQVGQW NMMNKKVING STVRYWACIN FSRSIQESTA RGFCQQLVQI
501: CQISGMEFSQ DPVIPIYSAK PDLVKKALKY VHSAVLDKLG GKELELLIAI LPDNNGSLYG DLKRICETDL GLISQCCLTK HVFKINRQYL ANVALKINVK
601: MGGRNTVLLD ALSWRIPLVS DIPTIIFGAD VTHPESGEDP CPSIAAVVAS QDWPEVTKYA GLVCAQPHRE ELIQDLFKCW KDPHHGIVYG GMIRELLLSF
701: KKATGQKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEPSYQPPVT FVVVQKRHHT RLFSNNHDDR NSTDKSGNIL PGTVVDSKIC HPTEFDFYLC
801: SHAGIQGTSR PAHYHVLWDE NNFTADEIQS LTNNLCYTYA RCTRSVSVVP PAYYAHLAAY RARFYMEPNV HEIAKSRGAR SKDESVRPLP ALKEKVKNVM
901: FYC

Best Arabidopsis Sequence Match ( AT1G48410.1 )
(BLAST)

0001: MVRKRRTDAP SEGGEGSGSR EAGPVSGGGR GSQRGGFQQG GGQHQGGRGY TPQPQQGGRG GRGYGQPPQQ QQQYGGPQEY QGRGRGGPPH QGGRGGYGGG
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC

Arabidopsis Description

AGO1ICU9 [Source:UniProtKB/TrEMBL;Acc:A0A178WL72]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.