CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 4
mitochondrion 2
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH31645	Soybean	nucleus	94.75	97.05
KRG91384	Soybean	cytosol	90.64	90.45
KRH35431	Soybean	cytosol	90.12	89.94
VIT_05s0020g04190.t01	Wine grape	nucleus	77.37	85.65
PGSC0003DMT400077569	Potato	nucleus, plastid	81.89	83.0
Bra033698.1-P	Field mustard	plastid	82.72	82.55
CDY22332	Canola	plastid	82.72	82.46
Solyc09g082830.2.1	Tomato	nucleus	83.23	82.38
CDX94724	Canola	plastid	82.92	82.16
KRG99173	Soybean	cytosol	13.17	82.05
AT5G43810.3	Thale cress	nucleus	82.82	81.48
KRH03770	Soybean	nucleus	68.11	73.31
KRH63036	Soybean	cytosol	68.21	72.94
KRH56656	Soybean	cytosol	68.11	72.91
KRH54842	Soybean	nucleus	66.98	71.62
KRH09472	Soybean	nucleus	70.68	65.24
KRH38925	Soybean	endoplasmic reticulum	70.88	65.12
KRH25139	Soybean	plastid	51.03	51.61
KRH30536	Soybean	plastid	46.91	51.24
KRH20672	Soybean	nucleus	32.41	34.5
KRG89867	Soybean	nucleus	33.44	34.32
KRH73469	Soybean	nucleus	31.69	34.0
KRH14678	Soybean	nucleus	31.58	33.89
KRH70802	Soybean	nucleus	35.91	33.85
KRH74941	Soybean	nucleus	35.8	33.82
KRG89432	Soybean	nucleus	30.56	30.75
KRH36727	Soybean	nucleus	14.3	30.68
KRH56276	Soybean	cytosol	25.0	29.24
KRH11732	Soybean	nucleus	29.94	28.06

Protein Annotations

EntrezGene:100819073	MapMan:16.10.3	Gene3D:2.170.260.10	Gene3D:3.30.420.10	Gene3D:3.40.50.2300	EMBL:ACUP02000687
InterPro:ArgoL1	InterPro:ArgoL2	InterPro:Argonaute_Mid_dom	InterPro:Argonaute_N	EnsemblPlantsGene:GLYMA_02G002500	GO:GO:0003674
GO:GO:0003676	GO:GO:0005488	GO:GO:0005515	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0031047	UniProt:I1JB56	InterPro:IPR003100	InterPro:IPR003165	InterPro:IPR036397	EnsemblPlants:KRH69078
ProteinID:KRH69078	ProteinID:KRH69078.1	ProteinID:KRH69079.1	InterPro:PAZ_dom	InterPro:PAZ_dom_sf	PFAM:PF02170
PFAM:PF02171	PFAM:PF08699	PFAM:PF16486	PFAM:PF16487	PFAM:PF16488	PFscan:PS50821
PFscan:PS50822	PANTHER:PTHR22891	PANTHER:PTHR22891:SF45	InterPro:Piwi	InterPro:RNaseH-like_sf	InterPro:RNaseH_sf
SMART:SM00949	SMART:SM00950	SMART:SM01163	SUPFAM:SSF101690	SUPFAM:SSF53098	UniParc:UPI0002337878
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:290784..300211

Molecular Weight (calculated)

109067.0 Da

IEP (calculated)

9.393

GRAVY (calculated)

-0.387

Length

972 amino acids

Sequence
(BLAST)

001: MPVRQMRESS EQHLVIKPHL QNPMNGAKKV PRAVQNGKGP PPPPLPQQEL PHNQTSPHVR NKGRRRSRGG GRKCDQGDVL MRPIVASGVE NGSTMCGEIE
101: MSCPTSSKSL SFAPRPGYGQ VGTKCIVKAN HFFAELPDKD LNQYDVSITP EVSSKAVNRS IIAELVRLYK ESDLGMRLPA YDGRKSLYTA GPLPFSWREF
201: KIKVVDDEDR VNGPKRERDY RVVIKFVARA NLHHLGQFLA GKCAEAPQEA LQILDIVLRE LSSKRFCPIG RSFFSPDIRT PQRLGEGLES WCGFYQSIRP
301: TQMGLSLNID MASAAFIEPL PVVEYVGQLL GKDILSRQLS DADRIKIKKA LRGVKVEVTH RGSVRRKYRV SGLTCQPTRE LVFPVDENST MKSVVEYFQE
401: MYGFTIKYTH LPCLQVGNQK KANYLPMEAC KIVEGQRYTK RLNEKQITAL LKVTCQRPRD RENDILQTIQ HNAYGQDPYA KEFGIKISEK LASVEARILP
501: APWLKYHESG KEKNCLPQVG QWNMMNKKMI NGMTVSQWAC INFSRSVQDS VARTFCTELA QMCQVSGMEF NPEPVIPIYN AKPEHVEKAL KHVYHASTNK
601: TKGKELELLL AILPDNNGSL YGDLKRICET DLGLISQCCL TKHVFKITKQ YLANVSLKIN VKMGGRNTVL VDAVSCRIPL VSDIPTIIFG ADVTHPENGE
701: DSSPSIAAVV ASQDWPEVTK YAGLVCAQAH RQELIQDLYK MWHDPVRGLV SGGMIRDLLI SFRKATGQKP LRIIFYRDGV SEGQFYQVLL YELDAIRKAC
801: ASLEPNYQPP VTFIVVQKRH HTRLFANNHR DRNSTDKSGN ILPGTVVDSK ICHPTEFDFY LCSHAGIQGT SRPAHYHVLW DENNFTADGI QSLTNNLCYT
901: YARCTRSVSV VPPAYYAHLA AFRARFYMEP DLQQENGSSG GGSKATRAGG VCGGVKPLPA LKENVKRVMF YC

Best Arabidopsis Sequence Match ( AT1G48410.1 )
(BLAST)

0001: MVRKRRTDAP SEGGEGSGSR EAGPVSGGGR GSQRGGFQQG GGQHQGGRGY TPQPQQGGRG GRGYGQPPQQ QQQYGGPQEY QGRGRGGPPH QGGRGGYGGG
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC

Arabidopsis Description

AGO1ICU9 [Source:UniProtKB/TrEMBL;Acc:A0A178WL72]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.