CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
nucleus 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P04100_001	Banana	extracellular	51.92	32.66
Zm00001d025073_P001	Maize	cytosol	63.46	25.52
Zm00001d025331_P002	Maize	cytosol	81.41	23.01
GSMUA_AchrUn_...	Banana	cytosol	39.74	20.39
TraesCS2A01G258200.1	Wheat	cytosol	66.03	15.47
KRH09472	Soybean	nucleus	92.95	13.77
KRH63036	Soybean	cytosol	80.13	13.75
KRH03770	Soybean	nucleus	79.49	13.73
KRH38925	Soybean	endoplasmic reticulum	92.95	13.71
KRH54842	Soybean	nucleus	79.49	13.64
KRH56656	Soybean	cytosol	78.85	13.55
KRH31645	Soybean	nucleus	82.05	13.49
KRH69078	Soybean	cytosol	82.05	13.17
KRG91384	Soybean	cytosol	81.41	13.04
OQU82149	Sorghum	nucleus	89.74	13.0
KRH35431	Soybean	cytosol	80.13	12.83
TraesCS2D01G400200.1	Wheat	nucleus	90.38	12.83
Os04t0566500-04	Rice	nucleus	90.38	12.81
TraesCS2B01G421000.2	Wheat	nucleus	90.38	12.79
Os02t0672200-01	Rice	cytosol	88.46	12.75
TraesCS2A01G403100.4	Wheat	nucleus	90.38	12.59
Zm00001d002650_P003	Maize	nucleus	89.74	12.43
GSMUA_AchrUn_...	Banana	cytosol	15.38	12.24
TraesCS6A01G254600.2	Wheat	plastid	83.97	12.07
Os02t0169400-01	Rice	nucleus	67.31	11.99
TraesCS6B01G270900.1	Wheat	nucleus	83.33	11.98
Zm00001d011096_P059	Maize	nucleus	84.62	11.91
EES18841	Sorghum	nucleus	84.62	11.9
TraesCS6D01G235900.1	Wheat	endoplasmic reticulum	84.62	11.86
TraesCS2A01G258100.1	Wheat	mitochondrion	66.03	11.76
KRH30536	Soybean	plastid	66.67	11.69
TraesCS5B01G116900.5	Wheat	cytosol, mitochondrion, nucleus, plastid	63.46	11.66
TraesCS1D01G151300.3	Wheat	plastid	63.46	11.66
TraesCSU01G065300.1	Wheat	nucleus	88.46	11.58
Zm00001d035747_P027	Maize	endoplasmic reticulum, plastid	85.26	11.58
TraesCS7A01G040700.5	Wheat	endoplasmic reticulum, golgi, vacuole	88.46	11.4
TraesCS7D01G036100.3	Wheat	endoplasmic reticulum, golgi	88.46	11.4
HORVU7Hr1G007000.14	Barley	nucleus	88.46	11.34
KRH36727	Soybean	nucleus	32.05	11.04
Zm00001d026111_P014	Maize	nucleus	75.64	10.78
KRH25139	Soybean	plastid	66.03	10.72
KRH56276	Soybean	cytosol	42.95	8.06
KRH73469	Soybean	nucleus	43.59	7.51
KRH14678	Soybean	nucleus	43.59	7.51
KRH74941	Soybean	nucleus	46.79	7.09
KRH70802	Soybean	nucleus	46.79	7.08
KRG89867	Soybean	nucleus	42.31	6.97
KRH20672	Soybean	nucleus	39.74	6.79
KRG89432	Soybean	nucleus	35.9	5.8
KRH11732	Soybean	nucleus	33.97	5.11
Zm00001d044183_P001	Maize	cytosol	0.64	0.55
Zm00001d037833_P001	Maize	mitochondrion	0.64	0.4
HORVU2Hr1G103840.1	Barley	cytosol	0.0	0.0

Protein Annotations

EMBL:ACUP02010989	EnsemblPlants:KRG99173	EnsemblPlantsGene:GLYMA_18G126300	Gene3D:3.30.420.10	Gene3D:3.40.50.2300	GO:GO:0003674
GO:GO:0003676	GO:GO:0005488	InterPro:IPR003165	InterPro:IPR036397	InterPro:Piwi	InterPro:RNaseH-like_sf
InterPro:RNaseH_sf	PANTHER:PTHR22891	PANTHER:PTHR22891:SF102	PFAM:PF02171	PFscan:PS50822	ProteinID:KRG99173
ProteinID:KRG99173.1	SUPFAM:SSF53098	UniParc:UPI0006ED6FE4	UniProt:A0A0R0F065	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr18:-:16675037..16676039

Molecular Weight (calculated)

17518.3 Da

IEP (calculated)

9.567

GRAVY (calculated)

-0.180

Length

156 amino acids

Sequence
(BLAST)

001: MFNLNYNGSL YGDLKRICET DLGLASQCCL TKHVFKMSKQ YLANVALKIN VKVGGRNTVL VDALSRRIPL VSDRPTIIFG TDVTHPHPGE DSNPSIAAIT
101: HRQELIQDLF KQWQDPVRGR VTGGMIKELL ISFRRAIGQK PQCIIFYRDG VSEGQF

Best Arabidopsis Sequence Match ( AT1G48410.1 )
(BLAST)

0001: MVRKRRTDAP SEGGEGSGSR EAGPVSGGGR GSQRGGFQQG GGQHQGGRGY TPQPQQGGRG GRGYGQPPQQ QQQYGGPQEY QGRGRGGPPH QGGRGGYGGG
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC

Arabidopsis Description

AGO1ICU9 [Source:UniProtKB/TrEMBL;Acc:A0A178WL72]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.