Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
- cytosol 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G254600.2 | Wheat | plastid | 96.5 | 96.5 |
| TraesCS6D01G235900.1 | Wheat | endoplasmic reticulum | 96.13 | 93.71 |
| KRG99173 | Soybean | cytosol | 11.98 | 83.33 |
| Os02t0672200-01 | Rice | cytosol | 80.92 | 81.15 |
| TraesCS2B01G421000.2 | Wheat | nucleus | 79.72 | 78.49 |
| VIT_19s0014g01840.t01 | Wine grape | cytosol, nucleus, plastid | 55.02 | 76.83 |
| Solyc03g098280.2.1 | Tomato | nucleus | 67.1 | 74.29 |
| Solyc06g072300.2.1 | Tomato | nucleus | 71.15 | 73.24 |
| PGSC0003DMT400069313 | Potato | cytosol | 70.97 | 73.06 |
| CDY04311 | Canola | cytosol, nucleus, plastid | 65.07 | 72.04 |
| CDY41831 | Canola | nucleus | 68.85 | 71.55 |
| CDY68174 | Canola | nucleus | 68.94 | 71.1 |
| AT1G48410.2 | Thale cress | nucleus | 68.66 | 70.95 |
| VIT_17s0053g00680.t01 | Wine grape | nucleus | 70.88 | 70.88 |
| TraesCS6B01G466700.1 | Wheat | nucleus | 65.71 | 70.39 |
| Bra014136.1-P | Field mustard | nucleus | 69.31 | 69.69 |
| GSMUA_Achr7P04100_001 | Banana | extracellular | 15.85 | 69.35 |
| PGSC0003DMT400079716 | Potato | nucleus | 70.78 | 68.15 |
| TraesCS7B01G256500.1 | Wheat | cytosol | 59.91 | 67.99 |
| TraesCS7B01G482100.1 | Wheat | nucleus | 63.69 | 66.96 |
| Bra032254.1-P | Field mustard | nucleus | 68.48 | 66.88 |
| CDY23683 | Canola | cytosol, nucleus, plastid | 66.73 | 66.67 |
| TraesCS4B01G026600.1 | Wheat | cytosol | 28.76 | 64.33 |
| TraesCS6B01G206700.1 | Wheat | plastid | 55.85 | 63.92 |
| TraesCS3B01G027100.1 | Wheat | cytosol | 8.66 | 61.44 |
| TraesCS5B01G468000.1 | Wheat | plastid | 46.27 | 57.5 |
| TraesCS5B01G116900.5 | Wheat | cytosol, mitochondrion, nucleus, plastid | 44.06 | 56.3 |
| TraesCS3B01G135800.1 | Wheat | cytosol | 42.21 | 54.46 |
| TraesCS3B01G287600.1 | Wheat | nucleus | 45.16 | 54.08 |
| TraesCS5B01G454200.1 | Wheat | cytosol | 33.27 | 53.48 |
| TraesCS5B01G452500.1 | Wheat | nucleus | 42.86 | 50.99 |
| TraesCS5B01G451400.2 | Wheat | plastid | 49.77 | 50.94 |
| TraesCS2B01G195200.2 | Wheat | nucleus | 47.0 | 50.6 |
| TraesCS5B01G455700.1 | Wheat | cytosol, mitochondrion, plastid | 45.35 | 49.95 |
| TraesCS4B01G024000.1 | Wheat | nucleus | 46.82 | 49.61 |
| TraesCS5B01G458100.1 | Wheat | cytosol | 34.93 | 39.89 |
| TraesCS7B01G437900.1 | Wheat | cytosol | 27.28 | 36.68 |
| TraesCS7B01G437700.1 | Wheat | nucleus | 28.85 | 35.61 |
| TraesCS5B01G162300.1 | Wheat | mitochondrion | 29.4 | 35.52 |
| TraesCS1B01G480100.1 | Wheat | nucleus | 29.68 | 34.74 |
| TraesCS3B01G217300.2 | Wheat | golgi, nucleus, unclear | 30.14 | 34.64 |
| TraesCS7B01G450300.1 | Wheat | nucleus | 29.12 | 34.39 |
| TraesCS2B01G434000.1 | Wheat | nucleus | 31.98 | 33.05 |
| TraesCS7B01G450200.2 | Wheat | nucleus | 28.02 | 32.83 |
| TraesCS7B01G373400.1 | Wheat | nucleus | 23.59 | 32.57 |
| TraesCS2B01G439000.2 | Wheat | nucleus, unclear | 28.85 | 29.92 |
| TraesCS2B01G438600.1 | Wheat | cytosol, nucleus, plastid | 20.83 | 28.14 |
| TraesCS2B01G438200.1 | Wheat | nucleus | 24.98 | 25.35 |
Protein Annotations
| MapMan:16.10.3 | Gene3D:2.170.260.10 | Gene3D:3.30.420.10 | Gene3D:3.40.50.2300 | InterPro:ArgoL1 | InterPro:ArgoL2 |
| InterPro:Argonaut_Gly-rich | InterPro:Argonaute_Mid_dom | InterPro:Argonaute_N | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:IPR003100 | InterPro:IPR003165 | InterPro:IPR036397 | InterPro:PAZ_dom | InterPro:PAZ_dom_sf |
| PFAM:PF02170 | PFAM:PF02171 | PFAM:PF08699 | PFAM:PF12764 | PFAM:PF16486 | PFAM:PF16487 |
| PFAM:PF16488 | PFscan:PS50821 | PFscan:PS50822 | PANTHER:PTHR22891 | PANTHER:PTHR22891:SF102 | InterPro:Piwi |
| InterPro:RNaseH-like_sf | InterPro:RNaseH_sf | SMART:SM00949 | SMART:SM00950 | SMART:SM01163 | SUPFAM:SSF101690 |
| SUPFAM:SSF53098 | EnsemblPlantsGene:TraesCS6B01G270900 | EnsemblPlants:TraesCS6B01G270900.1 | TIGR:cd02846 | TIGR:cd04657 | SEG:seg |
Description
No Description!
Coordinates
chr6B:+:487774935..487789368
Molecular Weight (calculated)
121191.0 Da
IEP (calculated)
9.865
GRAVY (calculated)
-0.513
Length
1085 amino acids
Sequence
(BLAST)
(BLAST)
0001: MASRTDSGYS PHDQALTMVK NKRYTPPSAR GSTETRNAPR TPGQDPSQRV ERDQQHGGGD WLHANTQYSQ QGGRGGGQHL RCGGHFQDPA SHHPFGGPVK
0101: YQAREYYGHG APRQRGTPQP YHDGHRSGSH GRGVPATPSV TLPELHQAPQ IQNQVPVLTP SPPETGSSSL HVEMNTGQVQ LQFQQLDIPR QSSSRQGIQS
0201: APSSTKSVRF PVRPGKGTFG SRCIVKANHF SAELPDKDLH QYDVSITPDI PSRGVNRAII GQLVTLYRHS LLGGRLPAYD GRKSLYTAGP LPFTSRTFNI
0301: VLQDEDDKLG GAQVAQRREK HFMVVIKFAA RADLHHLAMF LAGKQPDAPQ EAIQVLDIVL RELPTARYSP VARSFYSPNL GRRQQLGDGL ESWRGFYQSI
0401: RPTQMGLSLN IDMSSTAFIE PLPVIDFVAQ LLNRNVSVRP LSDADRVKIK KALRGVKVEV THRGNMRRKY RIFGLTSQAT RELTFPIDDH GTVKTVLKYF
0501: QETYGFNIQH TTLPCLQVGN QQRPNFLPME VCKIVEGQRY SKRLNEKQIT ALLKMTCQHP QQRELDILQT VNHNAYHEDP YAREFGIRID ERLASVEARV
0601: LPPPRLKYHD SGREKDVLPR IGQWNMRNKK MVNGGRVKEW ICINFARNVQ DSAARSFCRQ LADMCEISGM DFSKEPLLPP LCTRPDHVER ALKAHYQDAM
0701: SALKPLGREL DLLIAILPDI NGSLYGNLKR ICETNLGLIS QCCLTKHVKK TTPQYLANVA LKINVKVGGR NTVLVDALSR RIPLVSDRPT IIFGADVTHP
0801: HPGEDSSPSI AAVVASQDWP EVTKYAGLVS AQTRRQELIQ DLFKVWQDPQ KGTVNGGMVR ELLLSFHRST GQKPQRIIFY RDGVSEGQFY QVLLYELDAI
0901: RKACASLESN YQPPVTFVVV QKRHHTRLFA NNHNDQRSVD TKSGNILPGT VVDSKICHPI EFDFYLCSHA GIQGTSRPAH YHVLWDENNF TADGLQTLTN
1001: NLCYTYARCT RSVSIVPPAY YAHLAAFRAR FYMEPDTSDG GSVPSGATTS RAPAGARGGS RAAGNVAVKP LPDLKENVKR VMFYC
0101: YQAREYYGHG APRQRGTPQP YHDGHRSGSH GRGVPATPSV TLPELHQAPQ IQNQVPVLTP SPPETGSSSL HVEMNTGQVQ LQFQQLDIPR QSSSRQGIQS
0201: APSSTKSVRF PVRPGKGTFG SRCIVKANHF SAELPDKDLH QYDVSITPDI PSRGVNRAII GQLVTLYRHS LLGGRLPAYD GRKSLYTAGP LPFTSRTFNI
0301: VLQDEDDKLG GAQVAQRREK HFMVVIKFAA RADLHHLAMF LAGKQPDAPQ EAIQVLDIVL RELPTARYSP VARSFYSPNL GRRQQLGDGL ESWRGFYQSI
0401: RPTQMGLSLN IDMSSTAFIE PLPVIDFVAQ LLNRNVSVRP LSDADRVKIK KALRGVKVEV THRGNMRRKY RIFGLTSQAT RELTFPIDDH GTVKTVLKYF
0501: QETYGFNIQH TTLPCLQVGN QQRPNFLPME VCKIVEGQRY SKRLNEKQIT ALLKMTCQHP QQRELDILQT VNHNAYHEDP YAREFGIRID ERLASVEARV
0601: LPPPRLKYHD SGREKDVLPR IGQWNMRNKK MVNGGRVKEW ICINFARNVQ DSAARSFCRQ LADMCEISGM DFSKEPLLPP LCTRPDHVER ALKAHYQDAM
0701: SALKPLGREL DLLIAILPDI NGSLYGNLKR ICETNLGLIS QCCLTKHVKK TTPQYLANVA LKINVKVGGR NTVLVDALSR RIPLVSDRPT IIFGADVTHP
0801: HPGEDSSPSI AAVVASQDWP EVTKYAGLVS AQTRRQELIQ DLFKVWQDPQ KGTVNGGMVR ELLLSFHRST GQKPQRIIFY RDGVSEGQFY QVLLYELDAI
0901: RKACASLESN YQPPVTFVVV QKRHHTRLFA NNHNDQRSVD TKSGNILPGT VVDSKICHPI EFDFYLCSHA GIQGTSRPAH YHVLWDENNF TADGLQTLTN
1001: NLCYTYARCT RSVSIVPPAY YAHLAAFRAR FYMEPDTSDG GSVPSGATTS RAPAGARGGS RAAGNVAVKP LPDLKENVKR VMFYC
0001: MVRKRRTDAP SEGGEGSGSR EAGPVSGGGR GSQRGGFQQG GGQHQGGRGY TPQPQQGGRG GRGYGQPPQQ QQQYGGPQEY QGRGRGGPPH QGGRGGYGGG
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC
Arabidopsis Description
AGO1ICU9 [Source:UniProtKB/TrEMBL;Acc:A0A178WL72]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.