Factsheet for TraesCS2B01G434000.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G414800.1	Wheat	nucleus	87.71	98.61
HORVU0Hr1G005350.1	Barley	cytosol, golgi, mitochondrion	93.62	97.13
TraesCS2D01G412100.1	Wheat	plastid	97.9	92.03
Os03t0449200-00	Rice	nucleus	79.43	79.58
EER92100	Sorghum	cytosol	76.67	77.93
Zm00001d029573_P001	Maize	cytosol	75.81	77.13
GSMUA_Achr7P26400_001	Banana	cytosol	42.57	70.17
VIT_03s0038g00830.t01	Wine grape	nucleus	57.71	60.54
VIT_01s0113g00500.t01	Wine grape	nucleus	57.52	60.22
KRH70802	Soybean	nucleus	57.43	58.49
KRH74941	Soybean	nucleus	57.14	58.31
PGSC0003DMT400062439	Potato	nucleus	55.43	58.08
Solyc01g010970.2.1	Tomato	nucleus	55.14	57.9
CDY51501	Canola	nucleus	47.43	55.39
Bra003999.1-P	Field mustard	nucleus	51.52	55.15
CDY07349	Canola	nucleus	51.14	54.57
CDY28550	Canola	cytosol, plastid	50.19	54.0
AT1G69440.1	Thale cress	cytosol	50.38	53.43
TraesCS3B01G027100.1	Wheat	cytosol	6.48	44.44
TraesCS4B01G026600.1	Wheat	cytosol	20.0	43.3
TraesCS5B01G468000.1	Wheat	plastid	31.24	37.57
TraesCS3B01G135800.1	Wheat	cytosol	27.9	34.84
TraesCS7B01G256500.1	Wheat	cytosol	31.43	34.52
TraesCS6B01G206700.1	Wheat	plastid	30.29	33.54
TraesCS7B01G482100.1	Wheat	nucleus	32.67	33.24
TraesCS6B01G466700.1	Wheat	nucleus	32.0	33.17
TraesCS5B01G116900.5	Wheat	cytosol, mitochondrion, nucleus, plastid	26.48	32.74
TraesCS3B01G287600.1	Wheat	nucleus	28.1	32.56
TraesCS2B01G195200.2	Wheat	nucleus	30.95	32.24
TraesCS4B01G024000.1	Wheat	nucleus	31.33	32.13
TraesCS6B01G270900.1	Wheat	nucleus	33.05	31.98
TraesCS2B01G421000.2	Wheat	nucleus	33.24	31.67
TraesCS5B01G451400.2	Wheat	plastid	31.62	31.32
TraesCS5B01G455700.1	Wheat	cytosol, mitochondrion, plastid	29.14	31.07
TraesCS2B01G439000.2	Wheat	nucleus, unclear	30.48	30.59
TraesCS5B01G452500.1	Wheat	nucleus	26.48	30.48
TraesCS5B01G454200.1	Wheat	cytosol	19.43	30.22
TraesCS2B01G438600.1	Wheat	cytosol, nucleus, plastid	22.76	29.76
TraesCS7B01G437900.1	Wheat	cytosol	22.57	29.37
TraesCS7B01G437700.1	Wheat	nucleus	23.9	28.56
TraesCS5B01G162300.1	Wheat	mitochondrion	23.24	27.17
TraesCS3B01G217300.2	Wheat	golgi, nucleus, unclear	24.29	27.01
TraesCS1B01G480100.1	Wheat	nucleus	23.71	26.86
TraesCS2B01G438200.1	Wheat	nucleus	27.24	26.75
TraesCS7B01G450200.2	Wheat	nucleus	23.14	26.24
TraesCS7B01G450300.1	Wheat	nucleus	22.19	25.35
TraesCS7B01G373400.1	Wheat	nucleus	18.57	24.81
TraesCS5B01G458100.1	Wheat	cytosol	21.52	23.79

Protein Annotations

Gene3D:2.170.260.10	Gene3D:3.30.420.10	Gene3D:3.40.50.2300	MapMan:35.1	InterPro:ArgoL1	InterPro:ArgoL2
InterPro:Argonaute_N	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0006950
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009605	GO:GO:0009607	GO:GO:0009791
GO:GO:0009987	GO:GO:0010050	GO:GO:0010267	GO:GO:0010492	GO:GO:0010599	GO:GO:0016246
GO:GO:0040029	GO:GO:0040034	GO:GO:0051607	GO:GO:0060145	InterPro:IPR003100	InterPro:IPR003165
InterPro:IPR036397	InterPro:PAZ_dom	InterPro:PAZ_dom_sf	PFAM:PF02170	PFAM:PF02171	PFAM:PF08699
PFAM:PF16486	PFAM:PF16488	PFscan:PS50821	PFscan:PS50822	PANTHER:PTHR22891	PANTHER:PTHR22891:SF9
InterPro:Piwi	InterPro:RNaseH-like_sf	InterPro:RNaseH_sf	SMART:SM00949	SMART:SM00950	SMART:SM01163
SUPFAM:SSF101690	SUPFAM:SSF53098	EnsemblPlantsGene:TraesCS2B01G434000	EnsemblPlants:TraesCS2B01G434000.1	TIGR:cd02846	TIGR:cd04657
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr2B:+:623399317..623403368

Molecular Weight (calculated)

117244.0 Da

IEP (calculated)

9.667

GRAVY (calculated)

-0.425

Length

1050 amino acids

Sequence
(BLAST)

0001: MEREGGPKFE RKAGRGGDGR NAGSNGGGGG GGGGSGGNGR WKWSGVCGSG GGGGGGHRQY PIIQAYPALL PLPINSGRAH NNGAVALPLP PPVLLYLQQP
0101: PPLHLLPAAA TCYGKPMAGA AQRGAMWTHR PSKKPPPPPH AVTAALLPLP QDAKTLPHKK FSIREKKASD VGMDHANGHH RPSSNHQRSP IARRPDNGGI
0201: EGAVIPLSAN YFLVRFSPDQ KIFQYDIDIT PHPSKETARM IKNKLVQENS SVLSGALPAF DGRRDLYSPI EFQENKAEFF VNLPVASARC PVDKKNGHML
0301: DKQSFKVFKV NIRLVSKLSG EDLNKYLTED KDGISLPQDY LHALEVILRE GAMESSVLVG RSLYPRSMGE AREIGGGAVG LRGFFQSLRP TKQGLALNVD
0401: LSLTVFHEST GMIVYLQKRF DFLKDLSHQK TRALSEEERR EVEKALKNIQ VRVCHRETDQ RYHVHSLTKE TTENLKFRDR SAKDLMVVDY FKEQYNHDIQ
0501: FRNMPCLQIG RSKPCYVPME LCVVCEGQKF LGKLSDEQTS KVLRMGCQRP SERKGIIKGI VEEEFGAGSN SYADQFNLQV SKDMTQLSGR VLLPPRLKFG
0601: SGGRITDMTP HRFDRQWSLL DSHVTDGSKI KNWALISFGG TPEQHSYIPK FVNQLSSRCE QLGILLNKKP VISPLFERIQ LLNNPGILES KLGKIQEAAS
0701: GNLQLLICAM ERRHRGYADL KRIAETSIGV VTQCCLYPNL SKLTVQFVAN LALKMNAKLG GCNVSLYNSL PCQIPRIFSD EEPVMFMGAD VTHPHPLDDS
0801: SPSVVAVVAS MNWPAANKYI SRMRSQTHRK EIIEHLDVMT GELLEEFLKE VGKLPGRIIF FRDGVSETQF DKVLKEEMHA LRVACLRYPG YKPLTTFVVV
0901: QKRHHTRLFH REKNGGSTHY SDQNIPPGTV VDTVITHPRE FDFYLCSHWG TKGTSRPTHY HVLLDENRFQ SDEVQQLIHN LCYTFVRCTR PVSLVPPAYY
1001: AHLAAYRGRL YLERSDSVAT SCTTLYRSTP LQTTPLPKLS DSVKRLMFYC

Best Arabidopsis Sequence Match ( AT1G69440.1 )
(BLAST)

001: MEEKTHHHHH STNKHIPSSK SRTPLLHKPY HHHVQTNPPP FLLHPSSHQN LNLVASNLPS SYYYYYYCYF YSQFHNSLPP PPPPHLLPLS PPLPPLLPLP
101: PPHSMTRFHK SLPVSQVVER KQQHQQKKKI QVSNNKVSGS IAIEEAALVV AKRPDFGGQD GSVIYLLANH FLVKFDSSQR IYHYNVEISP QPSKEIARMI
201: KQKLVETDRN SFSGVVPAFD GRQNIYSPVE FQGDRLEFFV NLPIPSCKAV MNYGDLREKQ PQKKIEKLFR VNMKLVSKFD GKEQRKEGED WAPLPPEYIH
301: ALDVILRENP MEKCTSIGRS FYSSSMGGSK EIGGGAVGLR GFFQSLRHTQ QGLALNMDLS ITAFHESIGV IAYLQKRLEF LTDLPRNKGR ELSLEEKREV
401: EKALKNIRVF VCHRETVQRY RVYGLTEEIT ENIWFPDREG KYLRLMSYFK DHYGYEIQFK NLPCLQISRA RPCYLPMELC MICEGQKFLG KLSDDQAAKI
501: MKMGCQKPNE RKAIIDKVMT GSVGPSSGNQ TREFNLEVSR EMTLLKGRIL QPPKLKLDRP RNLKESKVFK GTRIERWALM SIGGSSDQKS TIPKFINELT
601: QKCEHLGVFL SKNTLSSTFF EPSHILNNIS LLESKLKEIQ RAASNNLQLI ICVMEKKHKG YGDLKRISET RIGVVTQCCL YPNITKLSSQ FVSNLALKIN
701: AKIGGSMTEL YNSIPSHIPR LLRPDEPVIF MGADVTHPHP FDDCSPSVAA VVGSINWPEA NRYVSRMRSQ THRQEIIQDL DLMVKELLDD FYKAVKKLPN
801: RIIFFRDGVS ETQFKKVLQE ELQSIKTACS KFQDYNPSIT FAVVQKRHHT RLFRCDPDHE NIPPGTVVDT VITHPKEFDF YLCSHLGVKG TSRPTHYHIL
901: WDENEFTSDE LQRLVYNLCY TFVRCTKPIS IVPPAYYAHL AAYRGRLYIE RSSESNGGSM NPSSVSRVGP PKTIPLPKLS DNVKNLMFYC

Arabidopsis Description

AGO7Protein argonaute 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9C793]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.