Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g010970.2.1 | Tomato | nucleus | 96.91 | 97.1 |
| VIT_03s0038g00830.t01 | Wine grape | nucleus | 74.65 | 74.73 |
| VIT_01s0113g00500.t01 | Wine grape | nucleus | 73.75 | 73.68 |
| KRH70802 | Soybean | nucleus | 73.55 | 71.48 |
| KRH74941 | Soybean | nucleus | 73.15 | 71.23 |
| GSMUA_Achr7P26400_001 | Banana | cytosol | 44.81 | 70.49 |
| AT1G69440.1 | Thale cress | cytosol | 63.17 | 63.94 |
| CDY28550 | Canola | cytosol, plastid | 61.28 | 62.91 |
| CDY51501 | Canola | nucleus | 56.29 | 62.74 |
| CDY07349 | Canola | nucleus | 61.08 | 62.2 |
| Bra003999.1-P | Field mustard | nucleus | 60.78 | 62.08 |
| TraesCS2A01G414800.1 | Wheat | nucleus | 56.19 | 60.28 |
| EER92100 | Sorghum | cytosol | 59.58 | 57.79 |
| Zm00001d029573_P001 | Maize | cytosol | 59.48 | 57.75 |
| HORVU0Hr1G005350.1 | Barley | cytosol, golgi, mitochondrion | 57.39 | 56.82 |
| Os03t0449200-00 | Rice | nucleus | 58.48 | 55.92 |
| TraesCS2B01G434000.1 | Wheat | nucleus | 58.08 | 55.43 |
| TraesCS2D01G412100.1 | Wheat | plastid | 57.68 | 51.75 |
| PGSC0003DMT400039204 | Potato | cytosol | 6.69 | 44.67 |
| PGSC0003DMT400070806 | Potato | nucleus | 11.08 | 38.01 |
| PGSC0003DMT400054667 | Potato | cytosol | 27.25 | 37.4 |
| PGSC0003DMT400053301 | Potato | nucleus | 32.73 | 35.65 |
| PGSC0003DMT400077569 | Potato | nucleus, plastid | 33.43 | 34.93 |
| PGSC0003DMT400069313 | Potato | cytosol | 35.83 | 34.06 |
| PGSC0003DMT400018363 | Potato | cytosol, nucleus, plastid | 33.73 | 32.98 |
| PGSC0003DMT400079716 | Potato | nucleus | 36.03 | 32.03 |
| PGSC0003DMT400054669 | Potato | cytosol | 33.33 | 31.78 |
| PGSC0003DMT400054661 | Potato | nucleus | 29.04 | 29.69 |
| PGSC0003DMT400069459 | Potato | nucleus | 26.75 | 29.35 |
| PGSC0003DMT400058471 | Potato | nucleus | 26.15 | 28.82 |
Protein Annotations
| EntrezGene:102600903 | Gene3D:2.170.260.10 | Gene3D:3.30.420.10 | Gene3D:3.40.50.2300 | MapMan:35.1 | InterPro:ArgoL1 |
| InterPro:ArgoL2 | InterPro:Argonaute_N | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006139 | GO:GO:0006950 |
| GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009791 |
| GO:GO:0009987 | GO:GO:0010050 | GO:GO:0010267 | GO:GO:0010492 | GO:GO:0010599 | GO:GO:0016246 |
| GO:GO:0031047 | GO:GO:0040029 | GO:GO:0040034 | GO:GO:0051607 | GO:GO:0060145 | InterPro:IPR003100 |
| InterPro:IPR003165 | InterPro:IPR036397 | UniProt:M1C932 | InterPro:PAZ_dom | InterPro:PAZ_dom_sf | PFAM:PF02170 |
| PFAM:PF02171 | PFAM:PF08699 | PFAM:PF16486 | PFAM:PF16488 | EnsemblPlantsGene:PGSC0003DMG400024301 | PGSC:PGSC0003DMG400024301 |
| EnsemblPlants:PGSC0003DMT400062439 | PFscan:PS50821 | PFscan:PS50822 | PANTHER:PTHR22891 | PANTHER:PTHR22891:SF9 | InterPro:Piwi |
| InterPro:RNaseH-like_sf | InterPro:RNaseH_sf | SMART:SM00949 | SMART:SM00950 | SMART:SM01163 | SUPFAM:SSF101690 |
| SUPFAM:SSF53098 | UniParc:UPI0002957C47 | RefSeq:XP_006365299.1 | SEG:seg | : | : |
Description
Eukaryotic translation initiation factor 2c [Source:PGSC_GENE;Acc:PGSC0003DMG400024301]
Coordinates
chr1:-:52318261..52322371
Molecular Weight (calculated)
114242.0 Da
IEP (calculated)
9.373
GRAVY (calculated)
-0.411
Length
1002 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEQTENSNKC NSKSTTAKIC PNNNNNNNNH YIAFGFHHNT NNTNNQNQYQ TYPPLLPLPP LLPPLQLPFP QNHNFRSRTH VHKPSFNQNH PFLATPSDSK
0101: IQEISASKVL QRQNDVSKQK YGRRVKAAAT TTESLVVARR PDSGGVEGQV ISLLANHFLV QFDPSQRIFH YDVEISPHPS KDIARLIKKK LVEDHSVMLS
0201: GALPVYDGGR TIYSPIEFQN NKIEFYISLP IPSSGSNKSG EMVKLQKEEQ QIKLFRVNIK LISKFDGKEL NSYLNKEGDD SGSPLPQEYL HALDVVLRES
0301: PTEKCITAGR SFYSSCMGGE KDIGGGAVAL RGFFQSLRPT QQGLALNVDF SVTAFHESIG VITYLEKRLD FLHDISHRKT RGLTNDEKKE VEKALKNIRV
0401: FVCHRETVQR YRIYSLTEEV TENLCFQDRD GKILRIVNYF KDHYNYDILY RNLPCLQISR SKPCYLPMEL CMICEGQKFL GKLSDDQTAR ILKMGCQRPR
0501: ERKAIIDRVV TGSVGPTSGN HASDFKLQIS KEMTQLYGRI LQPPKLKLGD RGQVRNLIPS RLDRQWNLLD SHVFEGTRVE RWALMSFGGT SDQKSHIPKF
0601: INQLCQRCEQ LGIFLNKNTV LNPQFEPLHL LNNVKNLETK LNKLHRASFN NLQLVICVME RKHKGYADLK RIAETSIGVV TQCCLYPNLG KISSQFLANL
0701: ALKINAKVGG CTVALYNSLP SQIPRLFKHD CPVIFMGADV THPHPLDDFS PSVAAVVGSV NWPAANKYVS RMRSQTHRQE IIQDLSTMVG EIIDDFYEEL
0801: LKLPERIIFF RDGVSETQFL KVLKEELQAI RMACSRFPGY KPPITFVVVQ KRHHTRLFPC ELDLSTTKNT LFNENILPGT VVDTVITHPS EFDFYLCSHW
0901: GVKGTSRPIH YHVLWDENQF TSDELQKLVY NLCYTFVRCT KPISLVPPAY YAHLAAYRGR LYLERSDLST LTRSSNISRA APPKTTPLPK LTENIKKLMF
1001: YC
0101: IQEISASKVL QRQNDVSKQK YGRRVKAAAT TTESLVVARR PDSGGVEGQV ISLLANHFLV QFDPSQRIFH YDVEISPHPS KDIARLIKKK LVEDHSVMLS
0201: GALPVYDGGR TIYSPIEFQN NKIEFYISLP IPSSGSNKSG EMVKLQKEEQ QIKLFRVNIK LISKFDGKEL NSYLNKEGDD SGSPLPQEYL HALDVVLRES
0301: PTEKCITAGR SFYSSCMGGE KDIGGGAVAL RGFFQSLRPT QQGLALNVDF SVTAFHESIG VITYLEKRLD FLHDISHRKT RGLTNDEKKE VEKALKNIRV
0401: FVCHRETVQR YRIYSLTEEV TENLCFQDRD GKILRIVNYF KDHYNYDILY RNLPCLQISR SKPCYLPMEL CMICEGQKFL GKLSDDQTAR ILKMGCQRPR
0501: ERKAIIDRVV TGSVGPTSGN HASDFKLQIS KEMTQLYGRI LQPPKLKLGD RGQVRNLIPS RLDRQWNLLD SHVFEGTRVE RWALMSFGGT SDQKSHIPKF
0601: INQLCQRCEQ LGIFLNKNTV LNPQFEPLHL LNNVKNLETK LNKLHRASFN NLQLVICVME RKHKGYADLK RIAETSIGVV TQCCLYPNLG KISSQFLANL
0701: ALKINAKVGG CTVALYNSLP SQIPRLFKHD CPVIFMGADV THPHPLDDFS PSVAAVVGSV NWPAANKYVS RMRSQTHRQE IIQDLSTMVG EIIDDFYEEL
0801: LKLPERIIFF RDGVSETQFL KVLKEELQAI RMACSRFPGY KPPITFVVVQ KRHHTRLFPC ELDLSTTKNT LFNENILPGT VVDTVITHPS EFDFYLCSHW
0901: GVKGTSRPIH YHVLWDENQF TSDELQKLVY NLCYTFVRCT KPISLVPPAY YAHLAAYRGR LYLERSDLST LTRSSNISRA APPKTTPLPK LTENIKKLMF
1001: YC
001: MEEKTHHHHH STNKHIPSSK SRTPLLHKPY HHHVQTNPPP FLLHPSSHQN LNLVASNLPS SYYYYYYCYF YSQFHNSLPP PPPPHLLPLS PPLPPLLPLP
101: PPHSMTRFHK SLPVSQVVER KQQHQQKKKI QVSNNKVSGS IAIEEAALVV AKRPDFGGQD GSVIYLLANH FLVKFDSSQR IYHYNVEISP QPSKEIARMI
201: KQKLVETDRN SFSGVVPAFD GRQNIYSPVE FQGDRLEFFV NLPIPSCKAV MNYGDLREKQ PQKKIEKLFR VNMKLVSKFD GKEQRKEGED WAPLPPEYIH
301: ALDVILRENP MEKCTSIGRS FYSSSMGGSK EIGGGAVGLR GFFQSLRHTQ QGLALNMDLS ITAFHESIGV IAYLQKRLEF LTDLPRNKGR ELSLEEKREV
401: EKALKNIRVF VCHRETVQRY RVYGLTEEIT ENIWFPDREG KYLRLMSYFK DHYGYEIQFK NLPCLQISRA RPCYLPMELC MICEGQKFLG KLSDDQAAKI
501: MKMGCQKPNE RKAIIDKVMT GSVGPSSGNQ TREFNLEVSR EMTLLKGRIL QPPKLKLDRP RNLKESKVFK GTRIERWALM SIGGSSDQKS TIPKFINELT
601: QKCEHLGVFL SKNTLSSTFF EPSHILNNIS LLESKLKEIQ RAASNNLQLI ICVMEKKHKG YGDLKRISET RIGVVTQCCL YPNITKLSSQ FVSNLALKIN
701: AKIGGSMTEL YNSIPSHIPR LLRPDEPVIF MGADVTHPHP FDDCSPSVAA VVGSINWPEA NRYVSRMRSQ THRQEIIQDL DLMVKELLDD FYKAVKKLPN
801: RIIFFRDGVS ETQFKKVLQE ELQSIKTACS KFQDYNPSIT FAVVQKRHHT RLFRCDPDHE NIPPGTVVDT VITHPKEFDF YLCSHLGVKG TSRPTHYHIL
901: WDENEFTSDE LQRLVYNLCY TFVRCTKPIS IVPPAYYAHL AAYRGRLYIE RSSESNGGSM NPSSVSRVGP PKTIPLPKLS DNVKNLMFYC
101: PPHSMTRFHK SLPVSQVVER KQQHQQKKKI QVSNNKVSGS IAIEEAALVV AKRPDFGGQD GSVIYLLANH FLVKFDSSQR IYHYNVEISP QPSKEIARMI
201: KQKLVETDRN SFSGVVPAFD GRQNIYSPVE FQGDRLEFFV NLPIPSCKAV MNYGDLREKQ PQKKIEKLFR VNMKLVSKFD GKEQRKEGED WAPLPPEYIH
301: ALDVILRENP MEKCTSIGRS FYSSSMGGSK EIGGGAVGLR GFFQSLRHTQ QGLALNMDLS ITAFHESIGV IAYLQKRLEF LTDLPRNKGR ELSLEEKREV
401: EKALKNIRVF VCHRETVQRY RVYGLTEEIT ENIWFPDREG KYLRLMSYFK DHYGYEIQFK NLPCLQISRA RPCYLPMELC MICEGQKFLG KLSDDQAAKI
501: MKMGCQKPNE RKAIIDKVMT GSVGPSSGNQ TREFNLEVSR EMTLLKGRIL QPPKLKLDRP RNLKESKVFK GTRIERWALM SIGGSSDQKS TIPKFINELT
601: QKCEHLGVFL SKNTLSSTFF EPSHILNNIS LLESKLKEIQ RAASNNLQLI ICVMEKKHKG YGDLKRISET RIGVVTQCCL YPNITKLSSQ FVSNLALKIN
701: AKIGGSMTEL YNSIPSHIPR LLRPDEPVIF MGADVTHPHP FDDCSPSVAA VVGSINWPEA NRYVSRMRSQ THRQEIIQDL DLMVKELLDD FYKAVKKLPN
801: RIIFFRDGVS ETQFKKVLQE ELQSIKTACS KFQDYNPSIT FAVVQKRHHT RLFRCDPDHE NIPPGTVVDT VITHPKEFDF YLCSHLGVKG TSRPTHYHIL
901: WDENEFTSDE LQRLVYNLCY TFVRCTKPIS IVPPAYYAHL AAYRGRLYIE RSSESNGGSM NPSSVSRVGP PKTIPLPKLS DNVKNLMFYC
Arabidopsis Description
AGO7Protein argonaute 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9C793]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.