CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
mitochondrion 2
cytosol 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra003999.1-P	Field mustard	nucleus	98.07	98.37
CDY51501	Canola	nucleus	88.62	97.0
CDY28550	Canola	cytosol, plastid	84.15	84.84
AT1G69440.1	Thale cress	cytosol	84.96	84.44
GSMUA_Achr7P26400_001	Banana	cytosol	42.07	64.99
VIT_03s0038g00830.t01	Wine grape	nucleus	64.02	62.94
VIT_01s0113g00500.t01	Wine grape	nucleus	63.52	62.31
KRH70802	Soybean	nucleus	64.02	61.11
PGSC0003DMT400062439	Potato	nucleus	62.2	61.08
KRH74941	Soybean	nucleus	63.82	61.03
Solyc01g010970.2.1	Tomato	nucleus	61.99	61.0
TraesCS2A01G414800.1	Wheat	nucleus	53.46	56.32
Zm00001d029573_P001	Maize	cytosol	56.2	53.59
EER92100	Sorghum	cytosol	56.2	53.53
HORVU0Hr1G005350.1	Barley	cytosol, golgi, mitochondrion	54.47	52.96
Os03t0449200-00	Rice	nucleus	55.69	52.29
TraesCS2B01G434000.1	Wheat	nucleus	54.57	51.14
TraesCS2D01G412100.1	Wheat	plastid	54.17	47.72
CDY68123	Canola	cytosol, endoplasmic reticulum, nucleus	9.86	41.1
CDY72062	Canola	plastid	10.98	36.36
CDY04517	Canola	plastid	33.23	34.17
CDX71410	Canola	nucleus	32.83	33.93
CDY22332	Canola	plastid	33.54	33.85
CDX94724	Canola	plastid	33.44	33.54
CDY04311	Canola	cytosol, nucleus, plastid	33.33	33.47
CDY70429	Canola	plastid	30.08	33.37
CDY41831	Canola	nucleus	34.15	32.18
CDY68174	Canola	nucleus	34.35	32.13
CDY23683	Canola	cytosol, nucleus, plastid	33.44	30.29
CDY02373	Canola	nucleus	30.89	29.72
CDY25885	Canola	cytosol	30.49	29.7
CDX79495	Canola	nucleus	25.91	29.41
CDX84712	Canola	nucleus	25.71	29.18
CDX92417	Canola	nucleus	19.0	29.04
CDY56413	Canola	nucleus	26.83	28.6
CDY04475	Canola	nucleus	26.83	28.6
CDY55876	Canola	cytosol	29.98	28.5
CDY09103	Canola	nucleus	26.22	28.48
CDY48192	Canola	nucleus	26.63	28.42
CDY16587	Canola	nucleus	25.41	28.34
CDX77061	Canola	nucleus	26.52	28.31
CDX92406	Canola	nucleus	25.81	28.1
CDY59516	Canola	nucleus	25.51	27.7
CDX92405	Canola	nucleus	25.61	27.54
CDY16595	Canola	nucleus	22.26	23.8
CDY62055	Canola	nucleus	10.26	17.53

Protein Annotations

Gene3D:2.170.260.10	Gene3D:3.30.420.10	Gene3D:3.40.50.2300	MapMan:35.1	GO:A0A078F311	UniProt:A0A078F311
InterPro:ArgoL1	InterPro:ArgoL2	InterPro:Argonaute_N	EnsemblPlants:CDY07349	ProteinID:CDY07349	ProteinID:CDY07349.1
GO:GO:0003674	GO:GO:0003676	GO:GO:0005488	GO:GO:0005515	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0031047	EnsemblPlantsGene:GSBRNA2T00124308001	InterPro:IPR003100	InterPro:IPR003165	InterPro:IPR036397
InterPro:MIP_CS	InterPro:PAZ_dom	InterPro:PAZ_dom_sf	PFAM:PF02170	PFAM:PF02171	PFAM:PF08699
PFAM:PF16486	PFAM:PF16488	ScanProsite:PS00221	PFscan:PS50821	PFscan:PS50822	PANTHER:PTHR22891
PANTHER:PTHR22891:SF9	InterPro:Piwi	InterPro:RNaseH-like_sf	InterPro:RNaseH_sf	SMART:SM00949	SMART:SM00950
SMART:SM01163	SUPFAM:SSF101690	SUPFAM:SSF53098	UniParc:UPI0004EDE5A2	SEG:seg	:

Description

BnaA07g24280DBnaA07g24280D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F311]

Coordinates

chrLK031978:+:93986..97446

Molecular Weight (calculated)

112472.0 Da

IEP (calculated)

9.717

GRAVY (calculated)

-0.440

Length

984 amino acids

Sequence
(BLAST)

001: MEEKTKNHHT NKHIRNFKSR TPLLHKPPPP FHHVHTNPLL FPSSSPHQSL NLLSTSIHSS HYYYYYCFYS QFHNTLLPPP PPLPFHPSPP LLPLPPPDQR
101: FFNSISKPLS LPPVVERKQK KQVFEHKDNI RNIKVISGST EAALVVAKRP DSGGQEGSVI YLLANHFLVK FDPSQKIYHY NVDITPHPSK EIARLIKQKL
201: VETEGKASFS GSVPAFDGRQ NVYSPVEFQE DKLEFFVNLP IQTCKTLMKC GGDLREKQPE KKVDKLFRVS MRLVSKFDGK KQRKEGESWA PLPQEYIHAL
301: DVILRENPTE KCTSIGRSFY SSSMGGSKEI GGGSVGLRGF FQSLRQTQQG LALNIDLSIA AFHESIGVIA YLQKKLEFLK DLSRNKGREL SLEERREVEK
401: ALKNIRAFVC HRETVQRYRV FGLTEEITES LWFQDRDGKQ LRVMSYFKDH YGYEIQFKNL PCLQISRTRP CYLPMELCVI CEGQKFLGKL SDDQTAKIMQ
501: MGCQRPNQRK DTIDKVMSGP VGPSSGKQTR EFNLEVSREM TLLKGRVLQP PKLKLERPRS LVVKGTRWAL MSIGGSSDQK STVPKFIHEL TQKCEHLGVF
601: LSKNTTSTTF FEPSHILNNV SLLELKLKEI QRAASSNLQL IICVMERKHK GYGDLKRIAE TKIGVVTQCC LYPNITKLNS QFVSNLALKI NAKIGGTMSE
701: LYNSIPSHIP RLFRLDEPVI FMGADVTHPH PFDDCSPSVA AVVGSINWPE ANRYVSRMRS QTHRQEIIQD LDVMVKELLE DFHKALKKLP NRIIFFRDGV
801: SETQFKKVLQ EELQAIKAAC SNFDHYNPTI TFAVVQKRHH TRLFRRDPVC HHENIPPGTV VDTVITHPKE FDFYLCSHLG VKGTSRPTHY HILWDENEFT
901: SDELQRLVYN LCYTFVRCTK PVSIVPPAYY AHLAAYRGRL YIERSSELTN GGSMNPSCVS RVGPPKTIPL PKLSDNVKNL MFYC

Best Arabidopsis Sequence Match ( AT1G69440.1 )
(BLAST)

001: MEEKTHHHHH STNKHIPSSK SRTPLLHKPY HHHVQTNPPP FLLHPSSHQN LNLVASNLPS SYYYYYYCYF YSQFHNSLPP PPPPHLLPLS PPLPPLLPLP
101: PPHSMTRFHK SLPVSQVVER KQQHQQKKKI QVSNNKVSGS IAIEEAALVV AKRPDFGGQD GSVIYLLANH FLVKFDSSQR IYHYNVEISP QPSKEIARMI
201: KQKLVETDRN SFSGVVPAFD GRQNIYSPVE FQGDRLEFFV NLPIPSCKAV MNYGDLREKQ PQKKIEKLFR VNMKLVSKFD GKEQRKEGED WAPLPPEYIH
301: ALDVILRENP MEKCTSIGRS FYSSSMGGSK EIGGGAVGLR GFFQSLRHTQ QGLALNMDLS ITAFHESIGV IAYLQKRLEF LTDLPRNKGR ELSLEEKREV
401: EKALKNIRVF VCHRETVQRY RVYGLTEEIT ENIWFPDREG KYLRLMSYFK DHYGYEIQFK NLPCLQISRA RPCYLPMELC MICEGQKFLG KLSDDQAAKI
501: MKMGCQKPNE RKAIIDKVMT GSVGPSSGNQ TREFNLEVSR EMTLLKGRIL QPPKLKLDRP RNLKESKVFK GTRIERWALM SIGGSSDQKS TIPKFINELT
601: QKCEHLGVFL SKNTLSSTFF EPSHILNNIS LLESKLKEIQ RAASNNLQLI ICVMEKKHKG YGDLKRISET RIGVVTQCCL YPNITKLSSQ FVSNLALKIN
701: AKIGGSMTEL YNSIPSHIPR LLRPDEPVIF MGADVTHPHP FDDCSPSVAA VVGSINWPEA NRYVSRMRSQ THRQEIIQDL DLMVKELLDD FYKAVKKLPN
801: RIIFFRDGVS ETQFKKVLQE ELQSIKTACS KFQDYNPSIT FAVVQKRHHT RLFRCDPDHE NIPPGTVVDT VITHPKEFDF YLCSHLGVKG TSRPTHYHIL
901: WDENEFTSDE LQRLVYNLCY TFVRCTKPIS IVPPAYYAHL AAYRGRLYIE RSSESNGGSM NPSSVSRVGP PKTIPLPKLS DNVKNLMFYC

Arabidopsis Description

AGO7Protein argonaute 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9C793]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.