Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX92406 | Canola | nucleus | 96.25 | 96.46 |
| CDY72062 | Canola | plastid | 27.48 | 83.84 |
| CDX92405 | Canola | nucleus | 83.44 | 82.62 |
| CDY09103 | Canola | nucleus | 79.36 | 79.36 |
| CDY16587 | Canola | nucleus | 76.16 | 78.23 |
| CDX92417 | Canola | nucleus | 54.3 | 76.4 |
| CDY16595 | Canola | nucleus | 76.38 | 75.22 |
| AT5G21150.1 | Thale cress | nucleus | 72.96 | 73.77 |
| CDY04475 | Canola | nucleus | 63.58 | 62.41 |
| CDY56413 | Canola | nucleus | 63.36 | 62.19 |
| CDY48192 | Canola | nucleus | 62.58 | 61.5 |
| CDX77061 | Canola | nucleus | 62.36 | 61.28 |
| GSMUA_Achr9P05150_001 | Banana | nucleus | 61.15 | 60.55 |
| Os01t0275600-01 | Rice | nucleus | 60.26 | 60.4 |
| Zm00001d008249_P012 | Maize | nucleus | 59.49 | 59.89 |
| Zm00001d040429_P012 | Maize | nucleus | 59.49 | 59.82 |
| Os04t0151800-02 | Rice | nucleus | 60.04 | 59.71 |
| OQU86696 | Sorghum | nucleus | 59.16 | 59.56 |
| TraesCS3A01G188400.1 | Wheat | nucleus | 59.93 | 59.28 |
| HORVU3Hr1G038830.1 | Barley | nucleus | 59.93 | 58.89 |
| TraesCS7D01G458800.1 | Wheat | nucleus | 30.13 | 58.58 |
| CDY68123 | Canola | cytosol, endoplasmic reticulum, nucleus | 15.12 | 58.05 |
| EES18816 | Sorghum | nucleus | 57.73 | 57.54 |
| TraesCS3B01G217300.2 | Wheat | golgi, nucleus, unclear | 59.93 | 57.52 |
| TraesCS1D01G453600.1 | Wheat | nucleus | 58.5 | 57.48 |
| TraesCS1A01G445500.1 | Wheat | golgi, unclear | 58.61 | 57.41 |
| TraesCS1B01G480100.1 | Wheat | nucleus | 58.72 | 57.39 |
| TraesCS7A01G533100.1 | Wheat | cytosol | 56.51 | 56.83 |
| PGSC0003DMT400039204 | Potato | cytosol | 9.38 | 56.67 |
| Zm00001d039214_P025 | Maize | nucleus | 57.62 | 56.49 |
| TraesCS7D01G520400.1 | Wheat | nucleus | 55.41 | 55.23 |
| TraesCS7B01G450300.1 | Wheat | nucleus | 55.08 | 54.3 |
| TraesCS3D01G191600.5 | Wheat | nucleus | 59.82 | 54.09 |
| CDX84712 | Canola | nucleus | 50.88 | 53.17 |
| TraesCS7A01G521000.1 | Wheat | nucleus | 47.57 | 53.14 |
| CDX79495 | Canola | nucleus | 50.77 | 53.06 |
| TraesCS7B01G450200.2 | Wheat | nucleus | 53.97 | 52.81 |
| TraesCS7B01G437900.1 | Wheat | cytosol | 47.02 | 52.79 |
| TraesCS7B01G437700.1 | Wheat | nucleus | 49.89 | 51.42 |
| EES00570 | Sorghum | nucleus | 50.22 | 50.67 |
| Os01t0275200-00 | Rice | golgi, peroxisome, plastid | 25.39 | 49.25 |
| TraesCS7B01G373400.1 | Wheat | nucleus | 41.28 | 47.58 |
| Solyc03g111760.2.1 | Tomato | mitochondrion | 44.7 | 44.21 |
| HORVU7Hr1G107770.1 | Barley | nucleus | 27.48 | 41.64 |
| TraesCS7D01G458900.1 | Wheat | mitochondrion | 8.28 | 41.21 |
| CDY62055 | Canola | nucleus | 24.39 | 38.37 |
| CDX71410 | Canola | nucleus | 33.22 | 31.62 |
| CDY04517 | Canola | plastid | 33.33 | 31.56 |
| CDY04311 | Canola | cytosol, nucleus, plastid | 33.77 | 31.22 |
| CDX94724 | Canola | plastid | 33.55 | 30.99 |
| CDY22332 | Canola | plastid | 33.33 | 30.97 |
| CDY41831 | Canola | nucleus | 34.66 | 30.08 |
| CDY68174 | Canola | nucleus | 34.77 | 29.94 |
| CDY23683 | Canola | cytosol, nucleus, plastid | 33.66 | 28.08 |
| CDY70429 | Canola | plastid | 26.38 | 26.94 |
| CDY51501 | Canola | nucleus | 26.27 | 26.47 |
| CDY07349 | Canola | nucleus | 27.7 | 25.51 |
| CDY28550 | Canola | cytosol, plastid | 27.04 | 25.1 |
| CDY25885 | Canola | cytosol | 27.81 | 24.95 |
| CDY02373 | Canola | nucleus | 27.15 | 24.05 |
| CDY55876 | Canola | cytosol | 26.93 | 23.57 |
Protein Annotations
| MapMan:12.5.1.13 | Gene3D:2.170.260.10 | Gene3D:3.30.420.10 | Gene3D:3.40.50.2300 | GO:A0A078J5G8 | UniProt:A0A078J5G8 |
| InterPro:ArgoL1 | InterPro:ArgoL2 | InterPro:Argonaute_N | EnsemblPlants:CDY59516 | ProteinID:CDY59516 | ProteinID:CDY59516.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0031047 | EnsemblPlantsGene:GSBRNA2T00026200001 | InterPro:IPR003100 | InterPro:IPR003165 |
| InterPro:IPR036397 | InterPro:PAZ_dom | InterPro:PAZ_dom_sf | PFAM:PF02170 | PFAM:PF02171 | PFAM:PF08699 |
| PFAM:PF16486 | PFAM:PF16488 | PFscan:PS50821 | PFscan:PS50822 | PANTHER:PTHR22891 | PANTHER:PTHR22891:SF20 |
| InterPro:Piwi | InterPro:RNaseH-like_sf | InterPro:RNaseH_sf | SMART:SM00950 | SMART:SM01163 | SUPFAM:SSF101690 |
| SUPFAM:SSF53098 | UniParc:UPI0004EDF372 | SEG:seg | : | : | : |
Description
BnaCnng35060DBnaCnng35060D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J5G8]
Coordinates
chrLK033772:-:15484..20130
Molecular Weight (calculated)
102574.0 Da
IEP (calculated)
9.802
GRAVY (calculated)
-0.396
Length
906 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSHEAKRLP PPPPVVPPNL VPEREPIKKT TLLPMARRGI GSEGVRTPLL TNHFRVNFNN ANGHFYRYSV TITYEDGSPM EAKGVFRKIL EKVQETYRTD
101: LGSKYFAYDG QKNLFTIGVL PSNKMDFLVV LENTPSSRNN TGNASPNETN DADRKRSRLP HRSKKFMVEI SYAARIPMQA IASAIRGKET DNLQDATRVL
201: DVILRQNAAR QGCLLVRQSF FHNDARNYIN IGGGVFGARG FHTSFKTTQR GLSLNIDTST TMVVQPGPVI DFLLANQNVN DPKYLDWNKA RRALKNLRVK
301: VVPSNRECKI TGLSEERCKD QMFTMNSKKE MGEVQITVYK YFTEIRGLKL RYSGDFPCIN VGKPNRPNYI PIEHCELVSL QRYTKSLSSF QKASLVENSR
401: QSPPDRMASL TNSMKKSNYN ADLVLQESGV SIGSSFIQVE GRVLPAPRLR IGNGEEFQPR NGRWNFNKKK LVEPVTVTRW VVVNFSAGCD TDRLISDLIR
501: CGKMKGMNVE PPYKVVFQEN PNYRGAPANI RVEKMFEQIQ SELRKEGKPK FILCVLAEKK NSLVYGPWKK KNLIEHGIVT QCIAPPKNVR DQYITNVLLK
601: INAKLGGLNS LLAMERSRAM MPLVTQVPTF IVGIDVSHGS PNQSDIPSIA AVVGSREWPL ISKYRACVRT QSRKTEMIDN LFKLVPNEKG KLVDEGIFWE
701: LLFDFYISSG KRRPEHIIIF RDGVSDSQFN QVLNIELDQM MQACKFVEEN WEPKFTVIIA QKNHHTKFFQ DRGTENVLPG TIVDSRICHP HNNDFYLCAH
801: AGLIGTTRPT HYHVLYDEIR FSTDDLQELV HSLSYVYQRS TTAISVVAPI CYAHLAAAQM GTVMKFEDMS LSERSSIHDG ITRSGEAPVP PMPMLNSYVA
901: SSMFFC
101: LGSKYFAYDG QKNLFTIGVL PSNKMDFLVV LENTPSSRNN TGNASPNETN DADRKRSRLP HRSKKFMVEI SYAARIPMQA IASAIRGKET DNLQDATRVL
201: DVILRQNAAR QGCLLVRQSF FHNDARNYIN IGGGVFGARG FHTSFKTTQR GLSLNIDTST TMVVQPGPVI DFLLANQNVN DPKYLDWNKA RRALKNLRVK
301: VVPSNRECKI TGLSEERCKD QMFTMNSKKE MGEVQITVYK YFTEIRGLKL RYSGDFPCIN VGKPNRPNYI PIEHCELVSL QRYTKSLSSF QKASLVENSR
401: QSPPDRMASL TNSMKKSNYN ADLVLQESGV SIGSSFIQVE GRVLPAPRLR IGNGEEFQPR NGRWNFNKKK LVEPVTVTRW VVVNFSAGCD TDRLISDLIR
501: CGKMKGMNVE PPYKVVFQEN PNYRGAPANI RVEKMFEQIQ SELRKEGKPK FILCVLAEKK NSLVYGPWKK KNLIEHGIVT QCIAPPKNVR DQYITNVLLK
601: INAKLGGLNS LLAMERSRAM MPLVTQVPTF IVGIDVSHGS PNQSDIPSIA AVVGSREWPL ISKYRACVRT QSRKTEMIDN LFKLVPNEKG KLVDEGIFWE
701: LLFDFYISSG KRRPEHIIIF RDGVSDSQFN QVLNIELDQM MQACKFVEEN WEPKFTVIIA QKNHHTKFFQ DRGTENVLPG TIVDSRICHP HNNDFYLCAH
801: AGLIGTTRPT HYHVLYDEIR FSTDDLQELV HSLSYVYQRS TTAISVVAPI CYAHLAAAQM GTVMKFEDMS LSERSSIHDG ITRSGEAPVP PMPMLNSYVA
901: SSMFFC
001: MDSDEPNGSG LPPPPPFVPA NLVPEVEPVK KNILLPMARP RGSGSKGQKI PLLTNHFGVK FNKPSGYFFH YSVAINYEDG RPVEAKGIGR KILDKVQETY
101: QSDLGAKYFA YDGEKTLFTV GALPSNKLDF SVVLEEIPSS RNHAGNDTND ADRKRSRRPN QTKKFMVEIS YAAKIPMQAI ASALQGKETE NLQDALRVLD
201: IILRQSAARQ GCLLVRQSFF HNDVKNFVPI GGGVSGCRGF HSSFRTTQGG LSLNIDTSTT MIVQPGPVVD FLLANQNKKD PYGMDWNKAR RVLKNLRVQI
301: TLSNREYKIS GLSEHSCKDQ LFTWRKPNDK GEFEEVEITV LNYYKERNIE VRYSGDFPCI NVGKPKRPTY FPIEFCNLVS LQRYTKSLTN FQRAALVEKS
401: RQKPPERMAS LTKGLKDSNY NADPVLQDSG VSIITNFTQV EGRILPTPML KVGKGENLSP IKGKWNFMRK TLAEPTTVTR WAVVNFSARC DTNTLIRDLI
501: KCGREKGINV EPPFKDVINE NPQFRNAPAT VRVENMFEQI KSKLPKPPLF LLCILAERKN SDVYGPWKKK NLVDLGIVTQ CIAPTRLNDQ YLTNVLLKIN
601: AKLGGLNSLL AMERSPAMPK VTQVPTIIVG MDVSHGSPGQ SDIPSIAAVV SSRQWPLISK YKACVRTQSR KMEMIDNLFK PVNGKDEGMF RELLLDFYYS
701: SENRKPEHII IFRDGVSESQ FNQVLNIELD QMMQACKFLD DTWHPKFTVI VAQKNHHTKF FQSRGPDNVP PGTIIDSQIC HPRNFDFYLC AHAGMIGTTR
801: PTHYHVLYDE IGFATDDLQE LVHSLSYVYQ RSTTAISVVA PVCYAHLAAA QMGTVMKYEE LSETSSSHGG ITTPGAVPVP PMPQLHNNVS TSMFFC
101: QSDLGAKYFA YDGEKTLFTV GALPSNKLDF SVVLEEIPSS RNHAGNDTND ADRKRSRRPN QTKKFMVEIS YAAKIPMQAI ASALQGKETE NLQDALRVLD
201: IILRQSAARQ GCLLVRQSFF HNDVKNFVPI GGGVSGCRGF HSSFRTTQGG LSLNIDTSTT MIVQPGPVVD FLLANQNKKD PYGMDWNKAR RVLKNLRVQI
301: TLSNREYKIS GLSEHSCKDQ LFTWRKPNDK GEFEEVEITV LNYYKERNIE VRYSGDFPCI NVGKPKRPTY FPIEFCNLVS LQRYTKSLTN FQRAALVEKS
401: RQKPPERMAS LTKGLKDSNY NADPVLQDSG VSIITNFTQV EGRILPTPML KVGKGENLSP IKGKWNFMRK TLAEPTTVTR WAVVNFSARC DTNTLIRDLI
501: KCGREKGINV EPPFKDVINE NPQFRNAPAT VRVENMFEQI KSKLPKPPLF LLCILAERKN SDVYGPWKKK NLVDLGIVTQ CIAPTRLNDQ YLTNVLLKIN
601: AKLGGLNSLL AMERSPAMPK VTQVPTIIVG MDVSHGSPGQ SDIPSIAAVV SSRQWPLISK YKACVRTQSR KMEMIDNLFK PVNGKDEGMF RELLLDFYYS
701: SENRKPEHII IFRDGVSESQ FNQVLNIELD QMMQACKFLD DTWHPKFTVI VAQKNHHTKF FQSRGPDNVP PGTIIDSQIC HPRNFDFYLC AHAGMIGTTR
801: PTHYHVLYDE IGFATDDLQE LVHSLSYVYQ RSTTAISVVA PVCYAHLAAA QMGTVMKYEE LSETSSSHGG ITTPGAVPVP PMPQLHNNVS TSMFFC
Arabidopsis Description
AGO9Protein argonaute 9 [Source:UniProtKB/Swiss-Prot;Acc:Q84VQ0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.