Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU1Hr1G075270.8 | |
| HORVU6Hr1G022890.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G27040.1 | HORVU6Hr1G022890.1 | AT2G40030.1 | 19410546 |
| AT2G27040.1 | HORVU1Hr1G075270.8 | AT5G04290.1 | 19410546 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G188400.1 | Wheat | nucleus | 96.2 | 96.83 |
| TraesCS3B01G217300.2 | Wheat | golgi, nucleus, unclear | 96.42 | 94.17 |
| TraesCS3D01G191600.5 | Wheat | nucleus | 96.1 | 88.42 |
| Os01t0275600-01 | Rice | nucleus | 84.92 | 86.61 |
| Zm00001d040429_P012 | Maize | nucleus | 81.67 | 83.57 |
| OQU86696 | Sorghum | nucleus | 80.8 | 82.78 |
| Zm00001d008249_P012 | Maize | nucleus | 80.8 | 82.78 |
| PGSC0003DMT400070806 | Potato | nucleus | 23.43 | 73.97 |
| GSMUA_Achr9P05150_001 | Banana | nucleus | 71.15 | 71.69 |
| VIT_06s0009g01200.t01 | Wine grape | nucleus | 69.96 | 70.65 |
| Solyc01g008960.2.1 | Tomato | nucleus | 69.09 | 70.08 |
| KRH14678 | Soybean | nucleus | 68.66 | 69.87 |
| PGSC0003DMT400058471 | Potato | nucleus | 68.87 | 69.86 |
| KRH73469 | Soybean | nucleus | 68.22 | 69.43 |
| PGSC0003DMT400069459 | Potato | nucleus | 67.35 | 68.02 |
| CDY72062 | Canola | plastid | 21.91 | 68.01 |
| Solyc06g073540.2.1 | Tomato | nucleus | 67.14 | 67.8 |
| Solyc01g096750.1.1 | Tomato | nucleus | 64.53 | 67.54 |
| VIT_08s0040g00070.t01 | Wine grape | nucleus | 66.27 | 66.56 |
| KRG89867 | Soybean | nucleus | 67.57 | 65.79 |
| CDY48192 | Canola | nucleus | 64.86 | 64.86 |
| AT2G27040.1 | Thale cress | nucleus | 64.97 | 64.83 |
| CDY56413 | Canola | nucleus | 64.86 | 64.79 |
| CDY04475 | Canola | nucleus | 64.86 | 64.79 |
| Bra034318.1-P | Field mustard | nucleus | 64.75 | 64.75 |
| CDX77061 | Canola | nucleus | 64.75 | 64.75 |
| Bra020152.1-P | Field mustard | nucleus | 63.45 | 64.57 |
| CDY09103 | Canola | nucleus | 63.34 | 64.46 |
| AT5G21150.1 | Thale cress | nucleus | 62.58 | 64.4 |
| Solyc06g073530.1.1 | Tomato | nucleus | 62.47 | 63.72 |
| CDX92417 | Canola | nucleus | 44.25 | 63.35 |
| Bra002361.1-P | Field mustard | nucleus | 61.61 | 62.35 |
| VIT_13s0175g00140.t01 | Wine grape | nucleus | 59.76 | 62.26 |
| CDX92405 | Canola | nucleus | 60.95 | 61.42 |
| CDY16587 | Canola | nucleus | 57.92 | 60.54 |
| CDX92406 | Canola | nucleus | 59.11 | 60.29 |
| HORVU0Hr1G012490.1 | Barley | nucleus | 57.48 | 60.02 |
| CDY59516 | Canola | nucleus | 58.89 | 59.93 |
| AT5G21030.2 | Thale cress | cytosol | 55.21 | 59.6 |
| PGSC0003DMT400039204 | Potato | cytosol | 9.54 | 58.67 |
| Bra002360.1-P | Field mustard | nucleus | 58.68 | 58.17 |
| CDY16595 | Canola | nucleus | 54.23 | 54.35 |
| KRH56276 | Soybean | cytosol | 48.7 | 54.03 |
| HORVU7Hr1G107770.1 | Barley | nucleus | 31.56 | 48.66 |
| Solyc03g111760.2.1 | Tomato | mitochondrion | 46.64 | 46.94 |
| CDY62055 | Canola | nucleus | 26.79 | 42.88 |
| HORVU2Hr1G031130.2 | Barley | cytosol, nucleus | 30.69 | 33.57 |
| HORVU6Hr1G036840.2 | Barley | plastid | 33.41 | 32.46 |
| HORVU2Hr1G045050.1 | Barley | cytosol, mitochondrion, plastid | 7.05 | 31.86 |
| Bra002349.1-P | Field mustard | nucleus | 56.83 | 30.81 |
| HORVU4Hr1G004030.1 | Barley | mitochondrion | 32.97 | 29.43 |
| HORVU7Hr1G120600.3 | Barley | cytosol, nucleus | 33.84 | 29.32 |
| HORVU3Hr1G021290.1 | Barley | cytosol, nucleus | 32.65 | 28.64 |
| HORVU7Hr1G007000.14 | Barley | nucleus | 33.3 | 25.23 |
| HORVU2Hr1G098650.1 | Barley | nucleus | 27.87 | 24.55 |
| HORVU0Hr1G005350.1 | Barley | cytosol, golgi, mitochondrion | 26.9 | 24.51 |
| HORVU2Hr1G098620.2 | Barley | nucleus | 23.75 | 21.49 |
| HORVU2Hr1G103840.1 | Barley | cytosol | 5.64 | 20.8 |
Protein Annotations
| MapMan:12.5.1.13 | Gene3D:2.170.260.10 | Gene3D:3.30.420.10 | Gene3D:3.40.50.2300 | UniProt:A0A287KTI1 | InterPro:ArgoL1 |
| InterPro:ArgoL2 | InterPro:Argonaute_N | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0031047 | EnsemblPlantsGene:HORVU3Hr1G038830 | EnsemblPlants:HORVU3Hr1G038830.1 |
| InterPro:IPR003100 | InterPro:IPR003165 | InterPro:IPR036397 | InterPro:PAZ_dom | InterPro:PAZ_dom_sf | PFAM:PF02170 |
| PFAM:PF02171 | PFAM:PF08699 | PFAM:PF16486 | PFAM:PF16488 | PFscan:PS50821 | PFscan:PS50822 |
| PANTHER:PTHR22891 | PANTHER:PTHR22891:SF56 | InterPro:Piwi | InterPro:RNaseH-like_sf | InterPro:RNaseH_sf | SMART:SM00950 |
| SMART:SM01163 | SUPFAM:SSF101690 | SUPFAM:SSF53098 | UniParc:UPI000B47143D | SEG:seg | : |
Description
No Description!
Coordinates
chrchr3H:+:226356734..226364526
Molecular Weight (calculated)
102611.0 Da
IEP (calculated)
9.260
GRAVY (calculated)
-0.374
Length
922 amino acids
Sequence
(BLAST)
(BLAST)
001: MESHVVEGDD LPPPPPLPPN AEPVKAQSAD DLPRPPPLPP VKPEEAKKIS KPRRALIARP GFGKRGNPIQ LVTNHFKVSL KTTDEFFHHY YVNLKYEDDR
101: PVDGKGVGRK VIDKLQQTYA SDLAHKDFAY DGEKSLFTIG ALPQINNEFV VVLEDFSTGK TPANGSPGND SPGNDKKRVK RPYQTKTFKV ELSFAARIPM
201: SAIAMALKGQ ESEHTQEAIR VIDIILRQHS AKQGCLLVRQ SFFHNNPSNF VDLGGGVMGC RGFHSSFRAT QSGLSLNIDV STTMIVKPGP VVDFLLANQK
301: VDHPNKIDWP KAKRALKNLR IKTSPANTEY KIVGLSDRNC YEQMFSLKQR NGGNGEPEAI EISVYDYFVK NRGIELRYSG DFPCINVGKP KRPTYFPIEL
401: CQLVPLQRYT KSLSTLQRSS LVEKSRQKPQ ERMSVLSDVL KRSSYDTEPM LRACGISIAQ GFTQVAGRVL QAPKLKAGNG EDIFTRNGRW NFNNKRLARA
501: CVVDRWAVVN FSARCNTVNL VSDLIKCGAM KGITVEKPHT IIEENGAMRR APAPKRVEDM FEQVKSKLPG APKFLLCVLA ERKNSDVYGP WKRKCLADFG
601: IVTQCVAPTR VNDQYLTNVL LKINAKLGGM NSLLQIEMSP SIPLVSKVPT LILGMDVSHG SPGQSDIPSI AAVVGSREWP LVSKYRASVR SQSPKLEMID
701: SLFKPQGTED DGLVRECLID FYTSSGKRKP DQIIIFSRDG VSESQFNQVL NIELDQIIEA CKFLDENWNP KFTLIVAQKN HHTKFFMPGS PDNVPPGTVV
801: DNAVCHPRNY DFYMCAHAGM IGTTRPTHYH ILHDEIHFAA DDLQDLVHSL SYVYQRSTTA ISVVSPICYA HLAAAQVAQF IKFDEMSETS SSQGGGHTST
901: ASGPVQELPR LHEKVRSSMF FC
101: PVDGKGVGRK VIDKLQQTYA SDLAHKDFAY DGEKSLFTIG ALPQINNEFV VVLEDFSTGK TPANGSPGND SPGNDKKRVK RPYQTKTFKV ELSFAARIPM
201: SAIAMALKGQ ESEHTQEAIR VIDIILRQHS AKQGCLLVRQ SFFHNNPSNF VDLGGGVMGC RGFHSSFRAT QSGLSLNIDV STTMIVKPGP VVDFLLANQK
301: VDHPNKIDWP KAKRALKNLR IKTSPANTEY KIVGLSDRNC YEQMFSLKQR NGGNGEPEAI EISVYDYFVK NRGIELRYSG DFPCINVGKP KRPTYFPIEL
401: CQLVPLQRYT KSLSTLQRSS LVEKSRQKPQ ERMSVLSDVL KRSSYDTEPM LRACGISIAQ GFTQVAGRVL QAPKLKAGNG EDIFTRNGRW NFNNKRLARA
501: CVVDRWAVVN FSARCNTVNL VSDLIKCGAM KGITVEKPHT IIEENGAMRR APAPKRVEDM FEQVKSKLPG APKFLLCVLA ERKNSDVYGP WKRKCLADFG
601: IVTQCVAPTR VNDQYLTNVL LKINAKLGGM NSLLQIEMSP SIPLVSKVPT LILGMDVSHG SPGQSDIPSI AAVVGSREWP LVSKYRASVR SQSPKLEMID
701: SLFKPQGTED DGLVRECLID FYTSSGKRKP DQIIIFSRDG VSESQFNQVL NIELDQIIEA CKFLDENWNP KFTLIVAQKN HHTKFFMPGS PDNVPPGTVV
801: DNAVCHPRNY DFYMCAHAGM IGTTRPTHYH ILHDEIHFAA DDLQDLVHSL SYVYQRSTTA ISVVSPICYA HLAAAQVAQF IKFDEMSETS SSQGGGHTST
901: ASGPVQELPR LHEKVRSSMF FC
001: MDSTNGNGAD LESANGANGS GVTEALPPPP PVIPPNVEPV RVKTELAEKK GPVRVPMARK GFGTRGQKIP LLTNHFKVDV ANLQGHFFHY SVALFYDDGR
101: PVEQKGVGRK ILDKVHQTYH SDLDGKEFAY DGEKTLFTYG ALPSNKMDFS VVLEEVSATR ANGNGSPNGN ESPSDGDRKR LRRPNRSKNF RVEISYAAKI
201: PLQALANAMR GQESENSQEA IRVLDIILRQ HAARQGCLLV RQSFFHNDPT NCEPVGGNIL GCRGFHSSFR TTQGGMSLNM DVTTTMIIKP GPVVDFLIAN
301: QNARDPYSID WSKAKRTLKN LRVKVSPSGQ EFKITGLSDK PCREQTFELK KRNPNENGEF ETTEVTVADY FRDTRHIDLQ YSADLPCINV GKPKRPTYIP
401: LELCALVPLQ RYTKALTTFQ RSALVEKSRQ KPQERMTVLS KALKVSNYDA EPLLRSCGIS ISSNFTQVEG RVLPAPKLKM GCGSETFPRN GRWNFNNKEF
501: VEPTKIQRWV VVNFSARCNV RQVVDDLIKI GGSKGIEIAS PFQVFEEGNQ FRRAPPMIRV ENMFKDIQSK LPGVPQFILC VLPDKKNSDL YGPWKKKNLT
601: EFGIVTQCMA PTRQPNDQYL TNLLLKINAK LGGLNSMLSV ERTPAFTVIS KVPTIILGMD VSHGSPGQSD VPSIAAVVSS REWPLISKYR ASVRTQPSKA
701: EMIESLVKKN GTEDDGIIKE LLVDFYTSSN KRKPEHIIIF RDGVSESQFN QVLNIELDQI IEACKLLDAN WNPKFLLLVA QKNHHTKFFQ PTSPENVPPG
801: TIIDNKICHP KNNDFYLCAH AGMIGTTRPT HYHVLYDEIG FSADELQELV HSLSYVYQRS TSAISVVAPI CYAHLAAAQL GTFMKFEDQS ETSSSHGGIT
901: APGPISVAQL PRLKDNVANS MFFC
101: PVEQKGVGRK ILDKVHQTYH SDLDGKEFAY DGEKTLFTYG ALPSNKMDFS VVLEEVSATR ANGNGSPNGN ESPSDGDRKR LRRPNRSKNF RVEISYAAKI
201: PLQALANAMR GQESENSQEA IRVLDIILRQ HAARQGCLLV RQSFFHNDPT NCEPVGGNIL GCRGFHSSFR TTQGGMSLNM DVTTTMIIKP GPVVDFLIAN
301: QNARDPYSID WSKAKRTLKN LRVKVSPSGQ EFKITGLSDK PCREQTFELK KRNPNENGEF ETTEVTVADY FRDTRHIDLQ YSADLPCINV GKPKRPTYIP
401: LELCALVPLQ RYTKALTTFQ RSALVEKSRQ KPQERMTVLS KALKVSNYDA EPLLRSCGIS ISSNFTQVEG RVLPAPKLKM GCGSETFPRN GRWNFNNKEF
501: VEPTKIQRWV VVNFSARCNV RQVVDDLIKI GGSKGIEIAS PFQVFEEGNQ FRRAPPMIRV ENMFKDIQSK LPGVPQFILC VLPDKKNSDL YGPWKKKNLT
601: EFGIVTQCMA PTRQPNDQYL TNLLLKINAK LGGLNSMLSV ERTPAFTVIS KVPTIILGMD VSHGSPGQSD VPSIAAVVSS REWPLISKYR ASVRTQPSKA
701: EMIESLVKKN GTEDDGIIKE LLVDFYTSSN KRKPEHIIIF RDGVSESQFN QVLNIELDQI IEACKLLDAN WNPKFLLLVA QKNHHTKFFQ PTSPENVPPG
801: TIIDNKICHP KNNDFYLCAH AGMIGTTRPT HYHVLYDEIG FSADELQELV HSLSYVYQRS TSAISVVAPI CYAHLAAAQL GTFMKFEDQS ETSSSHGGIT
901: APGPISVAQL PRLKDNVANS MFFC
Arabidopsis Description
AGO4Protein argonaute 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVD5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.