Factsheet for HORVU0Hr1G012490.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

mitochondrion 2
cytosol 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G169500.1	Wheat	cytosol	98.19	98.3
TraesCS5A01G165900.1	Wheat	cytosol	98.07	98.07
TraesCS5B01G162300.1	Wheat	mitochondrion	98.19	96.55
Os07t0265600-01	Rice	cytosol, nucleus	30.58	87.38
KXG23356	Sorghum	nucleus	85.5	85.7
Zm00001d019905_P003	Maize	nucleus	84.94	81.43
CDY68123	Canola	cytosol, endoplasmic reticulum, nucleus	17.67	66.1
Bra022057.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid	16.08	65.74
GSMUA_Achr9P22630_001	Banana	nucleus	66.36	65.4
VIT_12s0059g01430.t01	Wine grape	nucleus	67.16	64.46
Solyc07g049500.2.1	Tomato	nucleus	63.19	61.79
Bra022918.1-P	Field mustard	nucleus	60.14	61.25
CDX84712	Canola	nucleus	60.14	61.25
CDX79495	Canola	nucleus	59.57	60.67
AT2G32940.1	Thale cress	nucleus	59.0	59.34
KRH20672	Soybean	nucleus	60.14	58.16
HORVU3Hr1G038830.1	Barley	nucleus	60.02	57.48
GSMUA_Achr9P27810_001	Banana	plastid	54.59	55.34
HORVU7Hr1G107770.1	Barley	nucleus	28.43	41.97
HORVU2Hr1G031130.2	Barley	cytosol, nucleus	33.07	34.64
HORVU6Hr1G036840.2	Barley	plastid	35.11	32.67
HORVU4Hr1G004030.1	Barley	mitochondrion	35.79	30.59
HORVU7Hr1G120600.3	Barley	cytosol, nucleus	35.79	29.7
HORVU3Hr1G021290.1	Barley	cytosol, nucleus	33.41	28.07
HORVU2Hr1G045050.1	Barley	cytosol, mitochondrion, plastid	6.46	27.94
HORVU7Hr1G007000.14	Barley	nucleus	34.65	25.14
HORVU2Hr1G098650.1	Barley	nucleus	29.33	24.74
HORVU0Hr1G005350.1	Barley	cytosol, golgi, mitochondrion	27.52	24.01
HORVU2Hr1G098620.2	Barley	nucleus	24.35	21.1
HORVU2Hr1G103840.1	Barley	cytosol	5.66	20.0

Protein Annotations

MapMan:12.5.1.13	Gene3D:2.170.260.10	Gene3D:3.30.420.10	Gene3D:3.40.50.2300	UniProt:A0A287E072	InterPro:ArgoL1
InterPro:ArgoL2	InterPro:Argonaute_N	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006259	GO:GO:0006306	GO:GO:0006342	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009605	GO:GO:0009607	GO:GO:0009987	GO:GO:0016043	GO:GO:0030422
GO:GO:0031047	GO:GO:0035197	GO:GO:0040029	GO:GO:0051607	EnsemblPlantsGene:HORVU0Hr1G012490	EnsemblPlants:HORVU0Hr1G012490.1
InterPro:IPR003100	InterPro:IPR003165	InterPro:IPR036397	InterPro:PAZ_dom	InterPro:PAZ_dom_sf	PFAM:PF02170
PFAM:PF02171	PFAM:PF08699	PFAM:PF16486	PFAM:PF16488	PFscan:PS50821	PFscan:PS50822
PANTHER:PTHR22891	PANTHER:PTHR22891:SF35	InterPro:Piwi	InterPro:RNaseH-like_sf	InterPro:RNaseH_sf	SMART:SM00950
SMART:SM01163	SUPFAM:SSF101690	SUPFAM:SSF53098	UniParc:UPI000B466DBB	SEG:seg	:

Description

No Description!

Coordinates

chrchrUn:-:71291842..71302762

Molecular Weight (calculated)

98213.6 Da

IEP (calculated)

9.518

GRAVY (calculated)

-0.285

Length

883 amino acids

Sequence
(BLAST)

001: MAAKTGGAVQ VHKNDTVKRT AMARRGLGRE GKPIRLLSNH FAVKLSGIDA VFYQYSVSIK SDDDQVVEGK GIGRKVIDKM LQTYSSELAG KDFAYDGEKC
101: LFTVGPLPQN NFEFTVIMEE TSARAVGGSP GHESPGPGDK KRVKRSHLPK QFVVGISYAA RIPLRSVALA LQGSDSDHAQ DALRVLDIVL RQQQAKRGCL
201: LVRQSFFSDD SRNLVDLTGG VSGCRGLHSS FRTTMNGLSL NMDVSTTMIV TPGPVVNFLL TNQNVRDIRD IDWPKAKRML KNLRVKATHN NMEFKIIGLS
301: DQPCSRQTFP MKVRSGSSEG ETVDITVEEY FKSKQVFLEK PYLPCLDVGK PKRPNYLPIE LANMISLQRY TKALSSQQRT TLVEKSRQKP QDRMRVVTDA
401: VKSNRYDDDP IFSSCGIKID NQLTRVDGRV LPAPMLVVGN SQDCVPFKGR WNYNNKKLFE PVSIERWAIV NFSARCDMSR ISRDLINCGR TKGIIIEGPY
501: SLVDEDNQAR RCAPIVRVER MFEKVKANLP GPPEFLLCVL PERKNCDIYG PWKKKNLHEM GIVTQCIVPS TKMNDQYFTN VLLKINAKLG GMNSKLALEH
601: SRTIPVINKI PTIILGMDVS HGSPGRSDIP SIAAVVGSRC WPLISRYRAS VRTQSPKVEM IDSLFKPLDS GKDDGIIREL LLDFYTTSQQ RKPEQIIIFR
701: DGVSESQFSQ VLNLEVDQII KAYQNMGQGP PPKITVIIAQ KNHHTKLFQA DAPDNVPAGT VVDSGIVHPK QYDFYMCAHA GPIGTSRPTH YHVLLDQIGF
801: TPDELQKLVL SLSYVYQRST TAISVVAPIC YAHLAAAQMS QFIKFEEFAD TSSGSGVPSS STAATVPELP RLHSDVCSSM FFC

Best Arabidopsis Sequence Match ( AT2G32940.1 )
(BLAST)

001: METSSSLPLS PISIEPEQPS HRDYDITTRR GVGTTGNPIE LCTNHFNVSV RQPDVVFYQY TVSITTENGD AVDGTGISRK LMDQLFKTYS SDLDGKRLAY
101: DGEKTLYTVG PLPQNEFDFL VIVEGSFSKR DCGVSDGGSS SGTCKRSKRS FLPRSYKVQI HYAAEIPLKT VLGTQRGAYT PDKSAQDALR VLDIVLRQQA
201: AERGCLLVRQ AFFHSDGHPM KVGGGVIGIR GLHSSFRPTH GGLSLNIDVS TTMILEPGPV IEFLKANQSV ETPRQIDWIK AAKMLKHMRV KATHRNMEFK
301: IIGLSSKPCN QQLFSMKIKD GEREVPIREI TVYDYFKQTY TEPISSAYFP CLDVGKPDRP NYLPLEFCNL VSLQRYTKPL SGRQRVLLVE SSRQKPLERI
401: KTLNDAMHTY CYDKDPFLAG CGISIEKEMT QVEGRVLKPP MLKFGKNEDF QPCNGRWNFN NKMLLEPRAI KSWAIVNFSF PCDSSHISRE LISCGMRKGI
501: EIDRPFALVE EDPQYKKAGP VERVEKMIAT MKLKFPDPPH FILCILPERK TSDIYGPWKK ICLTEEGIHT QCICPIKISD QYLTNVLLKI NSKLGGINSL
601: LGIEYSYNIP LINKIPTLIL GMDVSHGPPG RADVPSVAAV VGSKCWPLIS RYRAAVRTQS PRLEMIDSLF QPIENTEKGD NGIMNELFVE FYRTSRARKP
701: KQIIIFRDGV SESQFEQVLK IEVDQIIKAY QRLGESDVPK FTVIVAQKNH HTKLFQAKGP ENVPAGTVVD TKIVHPTNYD FYMCAHAGKI GTSRPAHYHV
801: LLDEIGFSPD DLQNLIHSLS YVNQRSTTAT SIVAPVRYAH LAAAQVAQFT KFEGISEDGK VPELPRLHEN VEGNMFFC

Arabidopsis Description

AGO6Protein argonaute 6 [Source:UniProtKB/Swiss-Prot;Acc:O48771]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.