Factsheet for Zm00001d019905_P003

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG23356	Sorghum	nucleus	91.86	96.03
Os07t0265600-01	Rice	cytosol, nucleus	30.29	90.29
HORVU0Hr1G012490.1	Barley	nucleus	81.43	84.94
TraesCS5A01G165900.1	Wheat	cytosol	81.32	84.82
TraesCS5D01G169500.1	Wheat	cytosol	81.22	84.81
TraesCS5B01G162300.1	Wheat	mitochondrion	81.0	83.07
CDY68123	Canola	cytosol, endoplasmic reticulum, nucleus	17.16	66.95
GSMUA_Achr9P22630_001	Banana	nucleus	64.82	66.63
Bra022057.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid	15.53	66.2
VIT_12s0059g01430.t01	Wine grape	nucleus	65.26	65.33
Solyc07g049500.2.1	Tomato	nucleus	60.91	62.13
Bra022918.1-P	Field mustard	nucleus	58.31	61.94
CDX84712	Canola	nucleus	58.31	61.94
CDX79495	Canola	nucleus	57.76	61.36
AT2G32940.1	Thale cress	nucleus	57.33	60.14
KRH20672	Soybean	nucleus	58.96	59.47
Zm00001d040429_P012	Maize	nucleus	57.33	58.6
Zm00001d008249_P012	Maize	nucleus	56.89	58.22
GSMUA_Achr9P27810_001	Banana	plastid	52.77	55.8
Zm00001d039214_P025	Maize	nucleus	54.72	54.55
Zm00001d015926_P001	Maize	nucleus	10.97	44.89
Zm00001d005045_P001	Maize	cytosol, nucleus, peroxisome, plastid	10.21	40.69
Zm00001d018436_P001	Maize	cytosol	4.99	37.7
Zm00001d026146_P001	Maize	nucleus	5.86	36.99
Zm00001d044183_P001	Maize	cytosol	7.06	35.91
Zm00001d037833_P001	Maize	mitochondrion	9.12	33.87
Zm00001d025691_P001	Maize	mitochondrion	7.17	33.85
Zm00001d032611_P002	Maize	vacuole	13.46	33.33
Zm00001d036917_P009	Maize	nucleus	33.98	32.4
Zm00001d025331_P002	Maize	cytosol	19.33	32.25
Zm00001d025073_P001	Maize	cytosol	13.14	31.19
Zm00001d021345_P001	Maize	nucleus	31.38	31.11
Zm00001d036886_P001	Maize	plastid	7.6	30.97
Zm00001d046438_P003	Maize	cytosol	33.55	30.75
Zm00001d026300_P001	Maize	nucleus	29.1	30.42
Zm00001d002316_P003	Maize	plastid	28.23	30.37
Zm00001d013542_P003	Maize	nucleus	33.66	29.38
Zm00001d009158_P003	Maize	golgi	13.9	29.29
Zm00001d026111_P014	Maize	nucleus	34.42	28.95
Zm00001d011096_P059	Maize	nucleus	34.53	28.7
Zm00001d002650_P003	Maize	nucleus	34.85	28.51
Zm00001d014875_P001	Maize	nucleus	32.9	28.08
Zm00001d006351_P001	Maize	nucleus	32.03	28.02
Zm00001d007786_P001	Maize	nucleus	31.27	27.91
Zm00001d035747_P027	Maize	endoplasmic reticulum, plastid	34.31	27.5
Zm00001d013063_P001	Maize	nucleus	29.97	27.33
Zm00001d033206_P001	Maize	cytosol	28.12	26.81
Zm00001d033518_P001	Maize	nucleus	32.9	25.53
Zm00001d039440_P001	Maize	cytosol	6.62	25.0
Zm00001d029573_P001	Maize	cytosol	27.8	24.81
Zm00001d035554_P001	Maize	plastid	11.84	21.67

Protein Annotations

EntrezGene:100382704	MapMan:12.5.1.13	Gene3D:2.170.260.10	Gene3D:3.30.420.10	Gene3D:3.40.50.2300	UniProt:A0A1D6I0T3
InterPro:ArgoL1	InterPro:ArgoL2	InterPro:Argonaute_N	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006259	GO:GO:0006306	GO:GO:0006342	GO:GO:0006950	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009605	GO:GO:0009607	GO:GO:0009987	GO:GO:0016043
GO:GO:0030422	GO:GO:0031047	GO:GO:0035197	GO:GO:0040029	GO:GO:0051607	InterPro:IPR003100
InterPro:IPR003165	InterPro:IPR036397	ProteinID:ONM53872.1	InterPro:PAZ_dom	InterPro:PAZ_dom_sf	PFAM:PF02170
PFAM:PF02171	PFAM:PF08699	PFAM:PF16486	PFAM:PF16488	PFscan:PS50821	PFscan:PS50822
PANTHER:PTHR22891	PANTHER:PTHR22891:SF35	InterPro:Piwi	InterPro:RNaseH-like_sf	InterPro:RNaseH_sf	SMART:SM00949
SMART:SM00950	SMART:SM01163	SUPFAM:SSF101690	SUPFAM:SSF53098	UniParc:UPI00084448EF	EnsemblPlantsGene:Zm00001d019905
EnsemblPlants:Zm00001d019905_P003	EnsemblPlants:Zm00001d019905_T003	SEG:seg	:	:	:

Description

argonaute6 argonaute6

Coordinates

chr7:-:74375269..74402641

Molecular Weight (calculated)

103434.0 Da

IEP (calculated)

9.140

GRAVY (calculated)

-0.325

Length

921 amino acids

Sequence
(BLAST)

001: MEQRADGDEV LEQMGMGACR RWEQKQKRLF NNSFIWIPDS MAAKMAGAVQ VLKDDTVKRT PMARPSNGRE GKPIRLLSNH FSVKLRGVDA VFYQYSVCIK
101: SEDDKVVDSK GIGRKVIDKL LQTYCSELDG KDFAYDGEKC LFTVGPLPQN NFEFTVILEE TSSRAAGGSP VHESPTQANK KRVKRSHLAK KFSVDISYAA
201: KIPLQSVALA LRGSESEHGQ DVLRVLDVVL RQQQAKRGCL LVRQSFFSDD SRNLVDLTGG VSGCRGLHSS FRTTIGGLSL NMDVSTTMVV TPGPVIDFLV
301: TNQNVRDIRD IDWPRAKKML KNLRVKAKHN NMEFKIIGLS DQPCSRQMFP MKVRNGNIEI KSVDITVQDY FKSKQVELTM PYLPCLDVGK PKRPNYLPIE
401: LCHMVSLQRY TKALSSQQRA MLVEKSRQKP QERMRVVTDA VKSNMYDDDP ILSSCGIEIE KQLTRVDARV LSAPALVVGN SEDCIPNRGR WNYNNKRLFD
501: PVKIERWAIV NFSARCDMSR ISRELINCGR SKGIFIECPH SLVDEDSQSR RCSPVERVEK MFEKVKASLP GPPEFLLCLL PERKNCDIYG PWKKKNLHEM
601: GIVTQCIAPS NKMNDQYFTN VLLKINAKLG GMNSKLALEH RQMIPVVTQI PTLILGMDVS HGSPGRADIP SIAAVVGSRC WPLISRYRAS VRTQSPKVEM
701: IDSLFKPLDD GKDDGIMREL LLDFYQTSQQ RKPKQIIIFR DGVSESQFSQ VLNVELNQII KAYQSMGQGD LPKFTVIIAQ KNHHTKLFQA DSPENVPPGT
801: VVDSGIVHPR QYDFYMCAHA GPIGTSRPTH YHVLLDEIGF SADNLQKLVL SLSYVYQRST TAISVVAPIC YAHLAAAQMG QFMKFEEFAD TSSGSVNSSS
901: PPSIPELPRL HADVCSSMFF C

Best Arabidopsis Sequence Match ( AT2G32940.1 )
(BLAST)

001: METSSSLPLS PISIEPEQPS HRDYDITTRR GVGTTGNPIE LCTNHFNVSV RQPDVVFYQY TVSITTENGD AVDGTGISRK LMDQLFKTYS SDLDGKRLAY
101: DGEKTLYTVG PLPQNEFDFL VIVEGSFSKR DCGVSDGGSS SGTCKRSKRS FLPRSYKVQI HYAAEIPLKT VLGTQRGAYT PDKSAQDALR VLDIVLRQQA
201: AERGCLLVRQ AFFHSDGHPM KVGGGVIGIR GLHSSFRPTH GGLSLNIDVS TTMILEPGPV IEFLKANQSV ETPRQIDWIK AAKMLKHMRV KATHRNMEFK
301: IIGLSSKPCN QQLFSMKIKD GEREVPIREI TVYDYFKQTY TEPISSAYFP CLDVGKPDRP NYLPLEFCNL VSLQRYTKPL SGRQRVLLVE SSRQKPLERI
401: KTLNDAMHTY CYDKDPFLAG CGISIEKEMT QVEGRVLKPP MLKFGKNEDF QPCNGRWNFN NKMLLEPRAI KSWAIVNFSF PCDSSHISRE LISCGMRKGI
501: EIDRPFALVE EDPQYKKAGP VERVEKMIAT MKLKFPDPPH FILCILPERK TSDIYGPWKK ICLTEEGIHT QCICPIKISD QYLTNVLLKI NSKLGGINSL
601: LGIEYSYNIP LINKIPTLIL GMDVSHGPPG RADVPSVAAV VGSKCWPLIS RYRAAVRTQS PRLEMIDSLF QPIENTEKGD NGIMNELFVE FYRTSRARKP
701: KQIIIFRDGV SESQFEQVLK IEVDQIIKAY QRLGESDVPK FTVIVAQKNH HTKLFQAKGP ENVPAGTVVD TKIVHPTNYD FYMCAHAGKI GTSRPAHYHV
801: LLDEIGFSPD DLQNLIHSLS YVNQRSTTAT SIVAPVRYAH LAAAQVAQFT KFEGISEDGK VPELPRLHEN VEGNMFFC

Arabidopsis Description

AGO6Protein argonaute 6 [Source:UniProtKB/Swiss-Prot;Acc:O48771]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.