Factsheet for Zm00001d014875_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 2
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG20965	Sorghum	nucleus	82.21	84.64
Os06t0729300-01	Rice	nucleus	77.2	80.25
TraesCS7D01G552900.1	Wheat	mitochondrion	33.36	79.12
TraesCS7D01G553200.1	Wheat	nucleus, plastid	34.38	77.45
Zm00001d044183_P001	Maize	cytosol	12.97	77.35
Zm00001d037833_P001	Maize	mitochondrion	17.42	75.81
TraesCS7D01G553000.1	Wheat	cytosol	71.64	74.98
TraesCS7A01G557400.1	Wheat	plastid	71.55	74.81
HORVU7Hr1G120600.3	Barley	cytosol, nucleus	72.01	73.03
VIT_19s0014g01840.t01	Wine grape	cytosol, nucleus, plastid	51.25	71.17
Solyc03g098280.2.1	Tomato	nucleus	62.28	68.57
PGSC0003DMT400069313	Potato	cytosol	64.87	66.41
Solyc06g072300.2.1	Tomato	nucleus	64.87	66.41
CDY04311	Canola	cytosol, nucleus, plastid	59.87	65.92
VIT_17s0053g00680.t01	Wine grape	nucleus	65.62	65.25
CDY41831	Canola	nucleus	62.19	64.27
AT1G48410.2	Thale cress	nucleus	62.19	63.9
CDY68174	Canola	nucleus	62.09	63.69
Zm00001d026146_P001	Maize	nucleus	8.53	63.01
Zm00001d002650_P003	Maize	nucleus	65.62	62.88
Zm00001d026111_P014	Maize	nucleus	63.67	62.74
Zm00001d025331_P002	Maize	cytosol	31.97	62.5
Bra014136.1-P	Field mustard	nucleus	62.37	62.37
Zm00001d036917_P009	Maize	nucleus	55.7	62.22
PGSC0003DMT400079716	Potato	nucleus	64.23	61.49
Zm00001d011096_P059	Maize	nucleus	63.02	61.37
Zm00001d025073_P001	Maize	cytosol	22.06	61.34
CDY23683	Canola	cytosol, nucleus, plastid	61.08	60.68
Bra032254.1-P	Field mustard	nucleus	62.37	60.58
Zm00001d046438_P003	Maize	cytosol	56.16	60.3
Zm00001d035747_P027	Maize	endoplasmic reticulum, plastid	63.3	59.44
TraesCS3B01G027100.1	Wheat	cytosol	8.25	58.17
Zm00001d005045_P001	Maize	cytosol, nucleus, peroxisome, plastid	12.23	57.14
Zm00001d015926_P001	Maize	nucleus	11.68	56.0
Zm00001d018436_P001	Maize	cytosol	6.3	55.74
Zm00001d032611_P002	Maize	vacuole	18.54	53.76
Zm00001d036886_P001	Maize	plastid	11.03	52.65
Zm00001d025691_P001	Maize	mitochondrion	8.8	48.72
Zm00001d009158_P003	Maize	golgi	19.37	47.83
Zm00001d013542_P003	Maize	nucleus	45.69	46.73
Zm00001d021345_P001	Maize	nucleus	39.57	45.96
Zm00001d013063_P001	Maize	nucleus	42.08	44.95
Zm00001d006351_P001	Maize	nucleus	43.0	44.06
Zm00001d007786_P001	Maize	nucleus	41.8	43.7
Zm00001d033518_P001	Maize	nucleus	46.34	42.12
Zm00001d033206_P001	Maize	cytosol	33.92	37.89
Zm00001d039440_P001	Maize	cytosol	7.6	33.61
Zm00001d039214_P025	Maize	nucleus	28.17	32.9
Zm00001d019905_P003	Maize	nucleus	28.08	32.9
Zm00001d040429_P012	Maize	nucleus	27.43	32.85
Zm00001d002316_P003	Maize	plastid	25.86	32.59
Zm00001d008249_P012	Maize	nucleus	26.97	32.33
Zm00001d026300_P001	Maize	nucleus	25.3	30.99
Zm00001d029573_P001	Maize	cytosol	28.92	30.23
Zm00001d035554_P001	Maize	plastid	12.6	27.04

Protein Annotations

EntrezGene:103626484	MapMan:16.10.3	Gene3D:2.170.260.10	Gene3D:3.30.420.10	Gene3D:3.40.50.2300	UniProt:A0A1D6GWY2
ProteinID:AQK67372.1	InterPro:ArgoL1	InterPro:ArgoL2	InterPro:Argonaute_Mid_dom	InterPro:Argonaute_N	ncoils:Coil
GO:GO:0003674	GO:GO:0003676	GO:GO:0005488	GO:GO:0005515	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0031047	InterPro:IPR003100	InterPro:IPR003165	InterPro:IPR036397	InterPro:PAZ_dom
InterPro:PAZ_dom_sf	PFAM:PF02170	PFAM:PF02171	PFAM:PF08699	PFAM:PF16486	PFAM:PF16487
PFAM:PF16488	PFscan:PS50821	PFscan:PS50822	PANTHER:PTHR22891	PANTHER:PTHR22891:SF57	InterPro:Piwi
InterPro:RNaseH-like_sf	InterPro:RNaseH_sf	SMART:SM00949	SMART:SM00950	SMART:SM01163	SUPFAM:SSF101690
SUPFAM:SSF53098	UniParc:UPI00084528F6	EnsemblPlantsGene:Zm00001d014875	EnsemblPlants:Zm00001d014875_P001	EnsemblPlants:Zm00001d014875_T001	SEG:seg

Description

argonaute1d argonaute1d

Coordinates

chr5:+:66763342..66768991

Molecular Weight (calculated)

120241.0 Da

IEP (calculated)

9.172

GRAVY (calculated)

-0.443

Length

1079 amino acids

Sequence
(BLAST)

0001: MGSWRQKLPG LGEGSGSGSQ AAEAGGGGRG FRGRGGFYHQ QQSPQGGRGR GTGYYSGGGG GRGGRGAVPS AIAPELRQAM QTSNEPDNIP APEAGSQSQD
0101: APSPSEEAVD QLKGLSVQDI VQAFPVSSKF PHRPGNGSVG TRCLVKANHF FAELLPAKKD LHQYDVSVTP EVTSRIVNRS VMEELVRLHK LSYLGGRLPA
0201: YDGRKSLYTA GPLPFTSKEF HITLLEEDDG SGVERRKKTY KVVIKFAARA DLRRLEQFLA GRQAEAPQEA LQVLDIVLRE LPTTRYAPFG RSFFSPDLGR
0301: RRSLGEGIES WRGFYQSIRP TQMGLSLNID MSATAFFEPL PVIDFVAQLL NTDDIYSRPL LDAERVKIKK ALRGVKVEVT HRGNMRRKYR IAGLTSQETR
0401: ELTFPVDQGG TVKSVVQYFQ ETYGFAIQHT YLPCLQVGNQ QHPNYLPMEV CKIVEGQRYS KRLNQSQIRA LLEETCQRPH DRERDIIQMM NHNSYHEDPY
0501: AKEFGIKISE RLASIEARIL PAPRLKYNET GREKDCLPRV GQWNMMNKKM VNGGRVRSWT CVNFARNVQE NVAIGFCREL ARMCQASGMD FALEPILPPI
0601: YAHPDKVERA LKARFHDAMN LLGPQRREQL DLLLIGILPD NNGSLYGDLK RICEIDLGLV SQCCCAKQVF KMNKQILANL ALKINVKVGG RNTVLADAVS
0701: RRIPLVTDRP TIIFGADVTH PHPGEDSSPS IAAVVASQDW PEVTKYAGLV SAQSHRQELI EDLYNVTHDP QKGTVCGGMV RELLISFKKS TGQKPQRILF
0801: YRDGVSEGQF YQVLLHELDA IRKACASLEA NYQPQVTFIV VQKRHHTRLF AHNHNDQNSV DRSGNILPGT VVDSKICHPT EFDFFLCSHA GIKGTSRPAH
0901: YHVLWDENNF TADALQTLTN NLCYTYARCT RSVSIGRFVK VISIAESMHE QQINQKMHMP SLQSRRRTTL TWPHSAPGST WSLTAQTAGR WRVAPVEAER
1001: PPARQRPAAP APPPAEPLDP SPRSRTASRR SCSTADEPEH EDSRQPCLKS DPLGAVVWSV IICLLLTKPC SEDICLVFV

Best Arabidopsis Sequence Match ( AT1G48410.1 )
(BLAST)

0001: MVRKRRTDAP SEGGEGSGSR EAGPVSGGGR GSQRGGFQQG GGQHQGGRGY TPQPQQGGRG GRGYGQPPQQ QQQYGGPQEY QGRGRGGPPH QGGRGGYGGG
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC

Arabidopsis Description

AGO1ICU9 [Source:UniProtKB/TrEMBL;Acc:A0A178WL72]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.