Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY68174 | Canola | nucleus | 99.04 | 98.29 |
| Bra014136.1-P | Field mustard | nucleus | 99.9 | 96.66 |
| CDY04311 | Canola | cytosol, nucleus, plastid | 88.79 | 94.59 |
| AT1G48410.2 | Thale cress | nucleus | 90.9 | 90.38 |
| CDY23683 | Canola | cytosol, nucleus, plastid | 93.3 | 89.69 |
| Zm00001d044183_P001 | Maize | cytosol | 14.08 | 81.22 |
| VIT_19s0014g01840.t01 | Wine grape | cytosol, nucleus, plastid | 59.48 | 79.92 |
| Zm00001d037833_P001 | Maize | mitochondrion | 18.97 | 79.84 |
| Solyc06g072300.2.1 | Tomato | nucleus | 78.83 | 78.08 |
| Solyc03g098280.2.1 | Tomato | nucleus | 73.28 | 78.06 |
| PGSC0003DMT400069313 | Potato | cytosol | 78.64 | 77.89 |
| KRH38925 | Soybean | endoplasmic reticulum | 78.64 | 77.6 |
| KRH09472 | Soybean | nucleus | 77.87 | 77.21 |
| VIT_17s0053g00680.t01 | Wine grape | nucleus | 78.93 | 75.94 |
| GSMUA_Achr3P13970_001 | Banana | nucleus | 76.63 | 75.47 |
| TraesCS7D01G552900.1 | Wheat | mitochondrion | 32.57 | 74.73 |
| OQU82149 | Sorghum | nucleus | 76.63 | 74.28 |
| GSMUA_Achr1P17950_001 | Banana | nucleus | 73.85 | 73.08 |
| GSMUA_AchrUn_... | Banana | cytosol | 13.7 | 72.96 |
| Os04t0566500-04 | Rice | nucleus | 76.92 | 72.93 |
| Os02t0672200-01 | Rice | cytosol | 75.57 | 72.92 |
| TraesCS2D01G400200.1 | Wheat | nucleus | 76.44 | 72.61 |
| TraesCS7D01G553200.1 | Wheat | nucleus, plastid | 33.24 | 72.44 |
| TraesCS2B01G421000.2 | Wheat | nucleus | 76.44 | 72.41 |
| TraesCSU01G081900.1 | Wheat | plastid | 67.53 | 72.09 |
| PGSC0003DMT400079716 | Potato | nucleus | 77.78 | 72.05 |
| TraesCS2A01G403100.4 | Wheat | nucleus | 76.44 | 71.25 |
| Zm00001d002650_P003 | Maize | nucleus | 76.53 | 70.96 |
| GSMUA_Achr3P27070_001 | Banana | nucleus | 72.89 | 70.72 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 72.03 | 70.68 |
| Zm00001d026111_P014 | Maize | nucleus | 73.85 | 70.41 |
| GSMUA_Achr1P07120_001 | Banana | cytosol | 71.17 | 70.29 |
| EES18841 | Sorghum | nucleus | 74.23 | 69.88 |
| Os02t0831600-01 | Rice | extracellular | 67.62 | 69.83 |
| TraesCS6B01G466700.1 | Wheat | nucleus | 67.72 | 69.79 |
| GSMUA_Achr7P04100_001 | Banana | extracellular | 16.48 | 69.35 |
| Zm00001d011096_P059 | Maize | nucleus | 73.47 | 69.22 |
| TraesCS6A01G254600.2 | Wheat | plastid | 71.74 | 69.03 |
| TraesCS6B01G270900.1 | Wheat | nucleus | 71.55 | 68.85 |
| CDY22332 | Canola | plastid | 63.89 | 68.41 |
| CDX94724 | Canola | plastid | 64.18 | 68.3 |
| Zm00001d025331_P002 | Maize | cytosol | 36.02 | 68.12 |
| Os06t0729300-01 | Rice | nucleus | 67.53 | 67.92 |
| KXG20965 | Sorghum | nucleus | 68.1 | 67.84 |
| Zm00001d025073_P001 | Maize | cytosol | 25.19 | 67.78 |
| TraesCS6D01G403900.1 | Wheat | plastid | 68.2 | 67.49 |
| TraesCS6D01G235900.1 | Wheat | endoplasmic reticulum | 71.93 | 67.48 |
| TraesCSU01G065300.1 | Wheat | nucleus | 76.53 | 67.03 |
| TraesCS7B01G482100.1 | Wheat | nucleus | 65.9 | 66.67 |
| Zm00001d035747_P027 | Maize | endoplasmic reticulum, plastid | 73.37 | 66.67 |
| TraesCS7A01G557400.1 | Wheat | plastid | 65.8 | 66.57 |
| TraesCS7D01G553000.1 | Wheat | cytosol | 65.71 | 66.54 |
| TraesCS7D01G036100.3 | Wheat | endoplasmic reticulum, golgi | 76.44 | 65.95 |
| TraesCS7A01G040700.5 | Wheat | endoplasmic reticulum, golgi, vacuole | 76.15 | 65.7 |
| HORVU7Hr1G120600.3 | Barley | cytosol, nucleus | 65.42 | 64.19 |
| HORVU7Hr1G007000.14 | Barley | nucleus | 73.66 | 63.19 |
| OQU86027 | Sorghum | plastid | 66.19 | 62.59 |
| Zm00001d014875_P001 | Maize | nucleus | 64.27 | 62.19 |
| TraesCS3B01G027100.1 | Wheat | cytosol | 8.91 | 60.78 |
| TraesCS2A01G258200.1 | Wheat | cytosol | 38.7 | 60.66 |
| GSMUA_AchrUn_... | Banana | cytosol | 16.76 | 57.57 |
| CDX71410 | Canola | nucleus | 52.2 | 57.25 |
| CDY04517 | Canola | plastid | 52.11 | 56.84 |
| TraesCS1D01G151300.3 | Wheat | plastid | 44.92 | 55.24 |
| TraesCS5B01G116900.5 | Wheat | cytosol, mitochondrion, nucleus, plastid | 44.83 | 55.12 |
| TraesCS2A01G258100.1 | Wheat | mitochondrion | 45.11 | 53.77 |
| Os02t0169400-01 | Rice | nucleus | 44.44 | 52.97 |
| HORVU2Hr1G103840.1 | Barley | cytosol | 11.4 | 47.6 |
| CDY68123 | Canola | cytosol, endoplasmic reticulum, nucleus | 10.15 | 44.92 |
| CDY72062 | Canola | plastid | 12.26 | 43.1 |
| CDX84712 | Canola | nucleus | 30.75 | 37.02 |
| CDX92417 | Canola | nucleus | 22.8 | 36.96 |
| CDX79495 | Canola | nucleus | 30.46 | 36.68 |
| CDY09103 | Canola | nucleus | 30.46 | 35.1 |
| CDY51501 | Canola | nucleus | 30.17 | 35.04 |
| CDY16587 | Canola | nucleus | 29.6 | 35.03 |
| CDX92406 | Canola | nucleus | 30.27 | 34.96 |
| CDY48192 | Canola | nucleus | 30.75 | 34.82 |
| CDX77061 | Canola | nucleus | 30.65 | 34.71 |
| CDY59516 | Canola | nucleus | 30.08 | 34.66 |
| CDY56413 | Canola | nucleus | 30.36 | 34.34 |
| CDY04475 | Canola | nucleus | 30.27 | 34.24 |
| CDX92405 | Canola | nucleus | 29.98 | 34.21 |
| CDY07349 | Canola | nucleus | 32.18 | 34.15 |
| CDY28550 | Canola | cytosol, plastid | 31.9 | 34.12 |
| CDY70429 | Canola | plastid | 28.26 | 33.26 |
| CDY02373 | Canola | nucleus | 30.56 | 31.18 |
| CDY25885 | Canola | cytosol | 29.79 | 30.79 |
| CDY55876 | Canola | cytosol | 30.27 | 30.53 |
| CDY16595 | Canola | nucleus | 26.44 | 30.0 |
| CDY62055 | Canola | nucleus | 12.45 | 22.57 |
Protein Annotations
| MapMan:16.10.3 | Gene3D:2.170.260.10 | Gene3D:3.30.420.10 | Gene3D:3.40.50.2300 | GO:A0A078HVR6 | UniProt:A0A078HVR6 |
| InterPro:ArgoL1 | InterPro:ArgoL2 | InterPro:Argonaut_Gly-rich | InterPro:Argonaute_Mid_dom | InterPro:Argonaute_N | EnsemblPlants:CDY41831 |
| ProteinID:CDY41831 | ProteinID:CDY41831.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0031047 | EnsemblPlantsGene:GSBRNA2T00073753001 | InterPro:IPR003100 |
| InterPro:IPR003165 | InterPro:IPR036397 | InterPro:PAZ_dom | InterPro:PAZ_dom_sf | PFAM:PF02170 | PFAM:PF02171 |
| PFAM:PF08699 | PFAM:PF12764 | PFAM:PF16486 | PFAM:PF16487 | PFAM:PF16488 | PFscan:PS50821 |
| PFscan:PS50822 | PANTHER:PTHR22891 | PANTHER:PTHR22891:SF102 | InterPro:Piwi | InterPro:RNaseH-like_sf | InterPro:RNaseH_sf |
| SMART:SM00949 | SMART:SM00950 | SMART:SM01163 | SUPFAM:SSF101690 | SUPFAM:SSF53098 | UniParc:UPI0004EE8773 |
| SEG:seg | : | : | : | : | : |
Description
BnaA08g03260DBnaA08g03260D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HVR6]
Coordinates
chrLK032508:+:69590..75436
Molecular Weight (calculated)
115858.0 Da
IEP (calculated)
9.671
GRAVY (calculated)
-0.535
Length
1044 amino acids
Sequence
(BLAST)
(BLAST)
0001: MVRKKRTDGS SEGGEGSGSR EAGPHSGGGR GGYQQGGGRG GGGGGQQQGG RGYGPQSQQG GRGGGRGYGQ PPQQYGGPRE GQPPQHQHQQ QYGGPRGGPP
0101: RGGYGGGGRG GAPSAGQPQR QSVPELHQAT SPTYQAVSSQ PTPSEVSPTR IPDTSAPVQE FEQLSIEQGA SSQAIQPIPS SSKAFKFPMR PGKGQVGKRC
0201: IVKANHFFAE LPDKDLHQYD VTITPEVTSR GVNRAVMKQL VDLYRESHLG RRLPAYDGRK SLYTAGPLPF VSKEFRILLH DEEEGAGGQR REREFKVVIK
0301: LAARADLHHL GMFLQGKQAD APQEALQVLD IVLRELPTSK YTPVARSFYS PDIGRKQSLG DGLESWRGFY QSIRPTQMGL SLNIDMSSTA FIEALPVTEF
0401: VCQLLNRDIR SRPLSDADRV KIKKALRGVK VEVTHRGNMR RKYRISGLTA VATRELTFPV DERNTQKSVV EYFYETYGFR IQHTQLPCLQ VGNSNRPNYL
0501: PMEVCKIVEG QRYSKRLNER QITALLKVTC QRPQEREKDI LRTVELNDYS HDPYAKEFGI KISASLASVE ARILPPPWLK YHESGREGTC LPQVGQWNMM
0601: NKKMINGGTV SNWICINFSR QVPDNMARSF CQELAQMCHI SGMAFNPEPV LPPVSARPEH VEKVLKTRYH DAMAKLSQGK EIDLLIVILP DNNGSLYGDL
0701: KRICETELGI VSQCCLTKHV FKMSKQYMAN VALKINVKVG GRNTVLVDAL SRRIPLVSDR PTIIFGADVT HPHPGEDSSP SIAAVVASQD WPEVTKYAGL
0801: VCAQAHRQEL IQDLFKEWKD PQKGVVTGGM IKELLIAFRR STGHKPLRII FYRDGVSEGQ FYQVLLYELD AIRKACASLE AGYQPPVTFV VVQKRHHTRL
0901: FAQNHNDRNS VDRSGNILPG TVVDSKICHP TEFDFYLCSH AGIQGTSRPA HYHVLWDENN FSADGLQSLT NNLCYTYARC TRSVSIVPPA YYAHLAAFRA
1001: RFYMEPETSD SGMGGRNMRG PHVNAAVRPL PPLKDNVKRV MFYC
0101: RGGYGGGGRG GAPSAGQPQR QSVPELHQAT SPTYQAVSSQ PTPSEVSPTR IPDTSAPVQE FEQLSIEQGA SSQAIQPIPS SSKAFKFPMR PGKGQVGKRC
0201: IVKANHFFAE LPDKDLHQYD VTITPEVTSR GVNRAVMKQL VDLYRESHLG RRLPAYDGRK SLYTAGPLPF VSKEFRILLH DEEEGAGGQR REREFKVVIK
0301: LAARADLHHL GMFLQGKQAD APQEALQVLD IVLRELPTSK YTPVARSFYS PDIGRKQSLG DGLESWRGFY QSIRPTQMGL SLNIDMSSTA FIEALPVTEF
0401: VCQLLNRDIR SRPLSDADRV KIKKALRGVK VEVTHRGNMR RKYRISGLTA VATRELTFPV DERNTQKSVV EYFYETYGFR IQHTQLPCLQ VGNSNRPNYL
0501: PMEVCKIVEG QRYSKRLNER QITALLKVTC QRPQEREKDI LRTVELNDYS HDPYAKEFGI KISASLASVE ARILPPPWLK YHESGREGTC LPQVGQWNMM
0601: NKKMINGGTV SNWICINFSR QVPDNMARSF CQELAQMCHI SGMAFNPEPV LPPVSARPEH VEKVLKTRYH DAMAKLSQGK EIDLLIVILP DNNGSLYGDL
0701: KRICETELGI VSQCCLTKHV FKMSKQYMAN VALKINVKVG GRNTVLVDAL SRRIPLVSDR PTIIFGADVT HPHPGEDSSP SIAAVVASQD WPEVTKYAGL
0801: VCAQAHRQEL IQDLFKEWKD PQKGVVTGGM IKELLIAFRR STGHKPLRII FYRDGVSEGQ FYQVLLYELD AIRKACASLE AGYQPPVTFV VVQKRHHTRL
0901: FAQNHNDRNS VDRSGNILPG TVVDSKICHP TEFDFYLCSH AGIQGTSRPA HYHVLWDENN FSADGLQSLT NNLCYTYARC TRSVSIVPPA YYAHLAAFRA
1001: RFYMEPETSD SGMGGRNMRG PHVNAAVRPL PPLKDNVKRV MFYC
0001: MVRKRRTDAP SEGGEGSGSR EAGPVSGGGR GSQRGGFQQG GGQHQGGRGY TPQPQQGGRG GRGYGQPPQQ QQQYGGPQEY QGRGRGGPPH QGGRGGYGGG
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC
Arabidopsis Description
AGO1ICU9 [Source:UniProtKB/TrEMBL;Acc:A0A178WL72]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.