Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 3
- nucleus 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G081900.1 | Wheat | plastid | 93.58 | 96.93 |
| TraesCS6D01G403900.1 | Wheat | plastid | 94.08 | 90.33 |
| Os02t0831600-01 | Rice | extracellular | 81.74 | 81.9 |
| VIT_19s0014g01840.t01 | Wine grape | cytosol, nucleus, plastid | 58.05 | 75.68 |
| TraesCS7B01G482100.1 | Wheat | nucleus | 74.43 | 73.06 |
| Solyc03g098280.2.1 | Tomato | nucleus | 69.5 | 71.84 |
| CDY04311 | Canola | cytosol, nucleus, plastid | 68.61 | 70.92 |
| OQU86027 | Sorghum | plastid | 76.11 | 69.84 |
| Solyc06g072300.2.1 | Tomato | nucleus | 72.66 | 69.83 |
| PGSC0003DMT400069313 | Potato | cytosol | 72.56 | 69.73 |
| AT1G48410.2 | Thale cress | nucleus | 70.78 | 68.29 |
| CDY68174 | Canola | nucleus | 70.48 | 67.87 |
| CDY41831 | Canola | nucleus | 69.79 | 67.72 |
| VIT_17s0053g00680.t01 | Wine grape | nucleus | 72.06 | 67.28 |
| TraesCS2B01G421000.2 | Wheat | nucleus | 73.15 | 67.24 |
| Bra014136.1-P | Field mustard | nucleus | 70.58 | 66.27 |
| TraesCS6B01G270900.1 | Wheat | nucleus | 70.39 | 65.71 |
| TraesCS7B01G256500.1 | Wheat | cytosol | 61.9 | 65.59 |
| Bra032254.1-P | Field mustard | nucleus | 70.98 | 64.72 |
| CDY23683 | Canola | cytosol, nucleus, plastid | 69.3 | 64.64 |
| PGSC0003DMT400079716 | Potato | nucleus | 71.47 | 64.24 |
| TraesCS4B01G026600.1 | Wheat | cytosol | 30.6 | 63.92 |
| TraesCS6B01G206700.1 | Wheat | plastid | 57.95 | 61.92 |
| TraesCS3B01G027100.1 | Wheat | cytosol | 9.28 | 61.44 |
| TraesCS5B01G468000.1 | Wheat | plastid | 49.65 | 57.62 |
| TraesCS3B01G135800.1 | Wheat | cytosol | 45.41 | 54.7 |
| TraesCS5B01G454200.1 | Wheat | cytosol | 36.23 | 54.37 |
| TraesCS3B01G287600.1 | Wheat | nucleus | 48.27 | 53.97 |
| TraesCS5B01G116900.5 | Wheat | cytosol, mitochondrion, nucleus, plastid | 44.72 | 53.36 |
| TraesCS5B01G452500.1 | Wheat | nucleus | 45.8 | 50.88 |
| TraesCS5B01G451400.2 | Wheat | plastid | 51.63 | 49.34 |
| TraesCS4B01G024000.1 | Wheat | nucleus | 49.65 | 49.12 |
| TraesCS2B01G195200.2 | Wheat | nucleus | 48.86 | 49.11 |
| TraesCS5B01G455700.1 | Wheat | cytosol, mitochondrion, plastid | 47.58 | 48.93 |
| TraesCS5B01G458100.1 | Wheat | cytosol | 36.62 | 39.05 |
| TraesCS7B01G437900.1 | Wheat | cytosol | 28.83 | 36.18 |
| TraesCS7B01G437700.1 | Wheat | nucleus | 30.9 | 35.61 |
| TraesCS5B01G162300.1 | Wheat | mitochondrion | 30.9 | 34.86 |
| TraesCS1B01G480100.1 | Wheat | nucleus | 31.89 | 34.84 |
| TraesCS3B01G217300.2 | Wheat | golgi, nucleus, unclear | 31.98 | 34.32 |
| TraesCS7B01G450300.1 | Wheat | nucleus | 30.9 | 34.06 |
| TraesCS7B01G450200.2 | Wheat | nucleus | 29.81 | 32.61 |
| TraesCS2B01G434000.1 | Wheat | nucleus | 33.17 | 32.0 |
| TraesCS7B01G373400.1 | Wheat | nucleus | 24.78 | 31.93 |
| TraesCS2B01G438600.1 | Wheat | cytosol, nucleus, plastid | 23.2 | 29.27 |
| TraesCS2B01G439000.2 | Wheat | nucleus, unclear | 30.01 | 29.06 |
| TraesCS2B01G438200.1 | Wheat | nucleus | 26.55 | 25.16 |
Protein Annotations
| MapMan:16.10.3 | Gene3D:2.170.260.10 | Gene3D:3.30.420.10 | Gene3D:3.40.50.2300 | InterPro:ArgoL1 | InterPro:ArgoL2 |
| InterPro:Argonaute_Mid_dom | InterPro:Argonaute_N | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR003100 | InterPro:IPR003165 | InterPro:IPR036397 | InterPro:PAZ_dom | InterPro:PAZ_dom_sf | PFAM:PF02170 |
| PFAM:PF02171 | PFAM:PF08699 | PFAM:PF16486 | PFAM:PF16487 | PFAM:PF16488 | PFscan:PS50821 |
| PFscan:PS50822 | PANTHER:PTHR22891 | PANTHER:PTHR22891:SF34 | InterPro:Piwi | InterPro:RNaseH-like_sf | InterPro:RNaseH_sf |
| SMART:SM00949 | SMART:SM00950 | SMART:SM01163 | SUPFAM:SSF101690 | SUPFAM:SSF53098 | EnsemblPlantsGene:TraesCS6B01G466700 |
| EnsemblPlants:TraesCS6B01G466700.1 | TIGR:cd02846 | TIGR:cd04657 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr6B:-:716622776..716628625
Molecular Weight (calculated)
112041.0 Da
IEP (calculated)
9.973
GRAVY (calculated)
-0.501
Length
1013 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGSRRGRPQQ QYPPPPPAAA AEGPPRGGPA RGGGRGPFPQ QQVPQGGGRG NQGFTGAPLQ PPQPRDDAAA GRGRGRAARG TGTRHPGDGR GAARGAGTSS
0101: PAPVAAGPLG RLPPDLRQAM EEPSEPQEAI PASSKAIRFP PRPGKGSAGS RCLVKANHFI AQLPDKDLHH YHVSITPEVT SRVVNRAVIN ELVSLHRATY
0201: LGGRLPAYDG RKSLYTAGPL PFASKEFQIT LLDDDNGSGS ASQRRQRNFK VVIKFAARAD LHRLGMFLAG RHAEAPQEAL QVLDIVLREL PSARYAPFGR
0301: SFFSPDLGRR QPLGDGLESW RGFYQSIRPT QMGLSLNIDM SATAFIEPLP VIDYAAQLLR SDIHSRPLSD AERVKIKKAL RGVKVEVTHR GNMRRKYRIS
0401: GLTTQATREL TFPVDEGGTV KSVVQYFQET YGFAIQHTYL PCLQVGNQQR PNYLPMEVCK IVEGQRYSKR LNQNQIRALL DETCQYPRDR ERDITQMVKH
0501: NAYQEDPYAK EFGIKISDRL ASVDARILPA PRLKYNETGR EKDCTPRVGQ WNMMNKKMVN GGKVRSWMCV NFARNVPDKL ARDFCHQLAQ MCQDSGMDFA
0601: LEPVLPPMSA RPDQVERALK ARYHEAMNIL GPQRRELDLL IGILPDNNGS LYGDLKRVCE IDLGIVSQCC CTKQVFKLNK QIYANIALKI NVKVGGRNTV
0701: LVDALSRRIP LVTDRPTIIF GADVTHPHPD EDSSPSIAAV VASQDWPEVT RYAGLVSAQA HRQELIEDLY KVRQDPQKGP VSSGMIRELL ISFKKSTGEK
0801: PQRIIFYRDG VSEGQFYQVL LFELNAIRKA CASLEANYQP HVTFIVVQKR HHTRLFAHNH NDKNSMDRSG NILPGTVVDT KICHPTEFDF YLCSHAGIKG
0901: TSRPAHYHVL WDENNFTADG LQTLTNNLCY TYARCTRSVS IVPPAYYAHL AAFRARFYME PESSDSGSMA SGPGGRGPQS GSSASRGTRA PGGAAVKPLP
1001: ALKDNVKNVM FYC
0101: PAPVAAGPLG RLPPDLRQAM EEPSEPQEAI PASSKAIRFP PRPGKGSAGS RCLVKANHFI AQLPDKDLHH YHVSITPEVT SRVVNRAVIN ELVSLHRATY
0201: LGGRLPAYDG RKSLYTAGPL PFASKEFQIT LLDDDNGSGS ASQRRQRNFK VVIKFAARAD LHRLGMFLAG RHAEAPQEAL QVLDIVLREL PSARYAPFGR
0301: SFFSPDLGRR QPLGDGLESW RGFYQSIRPT QMGLSLNIDM SATAFIEPLP VIDYAAQLLR SDIHSRPLSD AERVKIKKAL RGVKVEVTHR GNMRRKYRIS
0401: GLTTQATREL TFPVDEGGTV KSVVQYFQET YGFAIQHTYL PCLQVGNQQR PNYLPMEVCK IVEGQRYSKR LNQNQIRALL DETCQYPRDR ERDITQMVKH
0501: NAYQEDPYAK EFGIKISDRL ASVDARILPA PRLKYNETGR EKDCTPRVGQ WNMMNKKMVN GGKVRSWMCV NFARNVPDKL ARDFCHQLAQ MCQDSGMDFA
0601: LEPVLPPMSA RPDQVERALK ARYHEAMNIL GPQRRELDLL IGILPDNNGS LYGDLKRVCE IDLGIVSQCC CTKQVFKLNK QIYANIALKI NVKVGGRNTV
0701: LVDALSRRIP LVTDRPTIIF GADVTHPHPD EDSSPSIAAV VASQDWPEVT RYAGLVSAQA HRQELIEDLY KVRQDPQKGP VSSGMIRELL ISFKKSTGEK
0801: PQRIIFYRDG VSEGQFYQVL LFELNAIRKA CASLEANYQP HVTFIVVQKR HHTRLFAHNH NDKNSMDRSG NILPGTVVDT KICHPTEFDF YLCSHAGIKG
0901: TSRPAHYHVL WDENNFTADG LQTLTNNLCY TYARCTRSVS IVPPAYYAHL AAFRARFYME PESSDSGSMA SGPGGRGPQS GSSASRGTRA PGGAAVKPLP
1001: ALKDNVKNVM FYC
0001: MVRKRRTDAP SEGGEGSGSR EAGPVSGGGR GSQRGGFQQG GGQHQGGRGY TPQPQQGGRG GRGYGQPPQQ QQQYGGPQEY QGRGRGGPPH QGGRGGYGGG
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC
Arabidopsis Description
AGO1ICU9 [Source:UniProtKB/TrEMBL;Acc:A0A178WL72]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.