Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G416500.1 | Wheat | nucleus | 91.77 | 92.81 |
| TraesCS2A01G419500.1 | Wheat | nucleus | 92.42 | 92.77 |
| TraesCS2B01G438600.1 | Wheat | cytosol, nucleus, plastid | 47.71 | 63.51 |
| TraesCS2B01G439000.2 | Wheat | nucleus, unclear | 47.71 | 48.76 |
| KRH36727 | Soybean | nucleus | 17.59 | 41.5 |
| PGSC0003DMT400054667 | Potato | cytosol | 26.75 | 39.18 |
| KRG89432 | Soybean | nucleus | 33.3 | 36.85 |
| Solyc02g069270.2.1 | Tomato | cytosol | 33.12 | 36.23 |
| TraesCS3B01G027100.1 | Wheat | cytosol | 5.05 | 35.29 |
| PGSC0003DMT400054669 | Potato | cytosol | 34.33 | 34.92 |
| VIT_10s0042g01180.t01 | Wine grape | nucleus, plastid | 30.96 | 34.92 |
| Solyc02g069260.2.1 | Tomato | nucleus | 33.96 | 34.84 |
| Solyc02g069280.2.1 | Tomato | nucleus | 32.27 | 34.53 |
| VIT_10s0042g01150.t01 | Wine grape | nucleus | 31.52 | 34.42 |
| CDY70429 | Canola | plastid | 28.53 | 34.39 |
| TraesCS4B01G026600.1 | Wheat | cytosol | 15.53 | 34.23 |
| VIT_10s0042g01200.t01 | Wine grape | nucleus | 31.52 | 33.9 |
| Bra040815.1-P | Field mustard | cytosol | 31.9 | 33.8 |
| CDY25885 | Canola | cytosol | 31.9 | 33.76 |
| KRH11732 | Soybean | nucleus | 32.74 | 33.75 |
| CDY55876 | Canola | cytosol | 32.65 | 33.72 |
| AT1G31280.1 | Thale cress | nucleus | 31.71 | 33.43 |
| CDY02373 | Canola | nucleus | 31.9 | 33.33 |
| Bra023172.1-P | Field mustard | nucleus | 32.18 | 33.17 |
| PGSC0003DMT400054661 | Potato | nucleus | 29.0 | 31.63 |
| AT1G31290.1 | Thale cress | nucleus | 33.02 | 29.56 |
| TraesCS5B01G468000.1 | Wheat | plastid | 22.64 | 27.72 |
| TraesCS3B01G135800.1 | Wheat | cytosol | 21.8 | 27.71 |
| TraesCS5B01G116900.5 | Wheat | cytosol, mitochondrion, nucleus, plastid | 21.89 | 27.56 |
| TraesCS7B01G482100.1 | Wheat | nucleus | 26.57 | 27.52 |
| TraesCS2B01G434000.1 | Wheat | nucleus | 26.75 | 27.24 |
| TraesCS7B01G256500.1 | Wheat | cytosol | 24.04 | 26.88 |
| TraesCS2B01G195200.2 | Wheat | nucleus | 25.26 | 26.79 |
| TraesCS6B01G466700.1 | Wheat | nucleus | 25.16 | 26.55 |
| TraesCS2B01G421000.2 | Wheat | nucleus | 26.75 | 25.95 |
| TraesCS4B01G024000.1 | Wheat | nucleus | 24.79 | 25.88 |
| TraesCS6B01G206700.1 | Wheat | plastid | 22.92 | 25.84 |
| TraesCS5B01G454200.1 | Wheat | cytosol | 16.28 | 25.78 |
| TraesCS3B01G287600.1 | Wheat | nucleus | 21.7 | 25.61 |
| TraesCS5B01G455700.1 | Wheat | cytosol, mitochondrion, plastid | 23.48 | 25.48 |
| TraesCS5B01G451400.2 | Wheat | plastid | 25.26 | 25.47 |
| TraesCS5B01G452500.1 | Wheat | nucleus | 21.33 | 25.0 |
| TraesCS6B01G270900.1 | Wheat | nucleus | 25.35 | 24.98 |
| TraesCS7B01G437900.1 | Wheat | cytosol | 18.62 | 24.66 |
| TraesCS7B01G437700.1 | Wheat | nucleus | 19.74 | 24.0 |
| TraesCS5B01G162300.1 | Wheat | mitochondrion | 20.11 | 23.94 |
| TraesCS1B01G480100.1 | Wheat | nucleus | 20.67 | 23.84 |
| TraesCS7B01G450300.1 | Wheat | nucleus | 20.49 | 23.83 |
| TraesCS3B01G217300.2 | Wheat | golgi, nucleus, unclear | 20.3 | 22.99 |
| TraesCS7B01G450200.2 | Wheat | nucleus | 19.27 | 22.25 |
| TraesCS7B01G373400.1 | Wheat | nucleus | 16.28 | 22.14 |
| TraesCS5B01G458100.1 | Wheat | cytosol | 17.87 | 20.11 |
Protein Annotations
| Gene3D:2.170.260.10 | Gene3D:3.30.420.10 | Gene3D:3.40.50.2300 | MapMan:35.1 | InterPro:ArgoL1 | InterPro:ArgoL2 |
| InterPro:Argonaute_N | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR003100 | InterPro:IPR003165 | InterPro:IPR036397 | InterPro:PAZ_dom | InterPro:PAZ_dom_sf | PFAM:PF02170 |
| PFAM:PF02171 | PFAM:PF16486 | PFAM:PF16488 | PFscan:PS50821 | PFscan:PS50822 | PANTHER:PTHR22891 |
| PANTHER:PTHR22891:SF4 | InterPro:Piwi | InterPro:RNaseH-like_sf | InterPro:RNaseH_sf | SMART:SM00950 | SMART:SM01163 |
| SUPFAM:SSF101690 | SUPFAM:SSF53098 | EnsemblPlantsGene:TraesCS2B01G438200 | EnsemblPlants:TraesCS2B01G438200.1 | TIGR:cd02846 | TIGR:cd04657 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr2B:-:630135789..630141704
Molecular Weight (calculated)
118345.0 Da
IEP (calculated)
9.165
GRAVY (calculated)
-0.676
Length
1069 amino acids
Sequence
(BLAST)
(BLAST)
0001: MANRRGGGGG GGRDGGRDSG DKRGGGGGRN RGRGGGRAAP PAGGRGPRDE VDETRGGGST PVGDQNRGGG ASRGLGQYRG GGGADRDRGA SSYARGGNRG
0101: PGGEDYGRVD NSYGRYQSPG GGGGDPSGSR GRGGRGSGSN GPRDPYHHGG EQGRGAGGGD HGGVGGPYGG YQGRGGGEDY YPSRWHGGGR GSCGYYPAPQ
0201: EERRRDKYPQ QFAATPSPKK IPSKEVASPS RPGVRKIGPI EEVEVKLWVN HFSIKFGESS IFHYSVKLAQ VSPEASGDLE LSMADQNFVK AQLLKMLQQS
0301: PNSLAVASDG KGNLYSFAEL PEGLSLLVSV RSRTYNASLQ FKDKLQLPSD EHVPRNVLQA LDVIVRQASS YEKIIIGQTL YSPHWLVLED SNHVHVQALG
0401: GTKQTLKPTK QGLVLCVDYS VMDFCKPESR VLDLVEHLLK RFGRRNHLNP RSPALDKEEW EYLKSQLRGL CITVSYQKKS SEGKRDAPTV RKYKVQDLTA
0501: ENAEQITFKE FKVDKSWELV QYYRQQYGED IQYKMLPCLV LSKRTDKPNN VPIELCRLHR CQKYPKDSSQ EPRRPPPSDE RKIRIERMVN DGLDGPCRGG
0601: NRGEQFKISL DTQMTEVTGR ILLPPVLKLG GSKELSIRLA NRQWNLQDHK IFEGQSLECW GVLDFSGQET LFRDAFIAKI VSKCNNLGIT MSYEPSLVHK
0701: SAMLVLSDPD KLRRELRKAK EAAEEKRQKL QLLFCPMSEL HPGYKTLKLI CEIELGIQTQ CLLTQLANKE GKGQDQYLSN LALKINSKLG GSNMQLSHEL
0801: PMVAGTRFMF IGADVNHPPP GDTVSPSIAA VVASMDCPSA SQYVPRIHAQ KGRKEKIDNL GTMCKELIQV YKERNGGFKP DKIIYFRDGV SDEQFDMVRK
0901: EELVSMKKGI CEDDYSPTIT VVVAKKRHHT RLFPKDENEL QTTNGNVLPG TVVDTVVVDQ SEEEDFFLCS HDGLHGTSRP THYYMLEDDN GFKRVDLQKL
1001: VYSMCFVFAR CTKPVSLTAP IKYADIAAYR GRDYCDSRMA SLQFQAQFQA VEFPELRVHP DLRDKMFFV
0101: PGGEDYGRVD NSYGRYQSPG GGGGDPSGSR GRGGRGSGSN GPRDPYHHGG EQGRGAGGGD HGGVGGPYGG YQGRGGGEDY YPSRWHGGGR GSCGYYPAPQ
0201: EERRRDKYPQ QFAATPSPKK IPSKEVASPS RPGVRKIGPI EEVEVKLWVN HFSIKFGESS IFHYSVKLAQ VSPEASGDLE LSMADQNFVK AQLLKMLQQS
0301: PNSLAVASDG KGNLYSFAEL PEGLSLLVSV RSRTYNASLQ FKDKLQLPSD EHVPRNVLQA LDVIVRQASS YEKIIIGQTL YSPHWLVLED SNHVHVQALG
0401: GTKQTLKPTK QGLVLCVDYS VMDFCKPESR VLDLVEHLLK RFGRRNHLNP RSPALDKEEW EYLKSQLRGL CITVSYQKKS SEGKRDAPTV RKYKVQDLTA
0501: ENAEQITFKE FKVDKSWELV QYYRQQYGED IQYKMLPCLV LSKRTDKPNN VPIELCRLHR CQKYPKDSSQ EPRRPPPSDE RKIRIERMVN DGLDGPCRGG
0601: NRGEQFKISL DTQMTEVTGR ILLPPVLKLG GSKELSIRLA NRQWNLQDHK IFEGQSLECW GVLDFSGQET LFRDAFIAKI VSKCNNLGIT MSYEPSLVHK
0701: SAMLVLSDPD KLRRELRKAK EAAEEKRQKL QLLFCPMSEL HPGYKTLKLI CEIELGIQTQ CLLTQLANKE GKGQDQYLSN LALKINSKLG GSNMQLSHEL
0801: PMVAGTRFMF IGADVNHPPP GDTVSPSIAA VVASMDCPSA SQYVPRIHAQ KGRKEKIDNL GTMCKELIQV YKERNGGFKP DKIIYFRDGV SDEQFDMVRK
0901: EELVSMKKGI CEDDYSPTIT VVVAKKRHHT RLFPKDENEL QTTNGNVLPG TVVDTVVVDQ SEEEDFFLCS HDGLHGTSRP THYYMLEDDN GFKRVDLQKL
1001: VYSMCFVFAR CTKPVSLTAP IKYADIAAYR GRDYCDSRMA SLQFQAQFQA VEFPELRVHP DLRDKMFFV
0001: MVRKRRTDAP SEGGEGSGSR EAGPVSGGGR GSQRGGFQQG GGQHQGGRGY TPQPQQGGRG GRGYGQPPQQ QQQYGGPQEY QGRGRGGPPH QGGRGGYGGG
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC
Arabidopsis Description
AGO1ICU9 [Source:UniProtKB/TrEMBL;Acc:A0A178WL72]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.