Factsheet for TraesCS7B01G256500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G351700.1	Wheat	cytosol	99.06	99.47
TraesCS7A01G371200.2	Wheat	cytosol	97.8	97.19
Zm00001d036917_P009	Maize	nucleus	90.17	89.23
KXG20286	Sorghum	cytosol	91.0	88.69
Os06t0597400-01	Rice	cytosol	90.59	88.46
Zm00001d046438_P003	Maize	cytosol	90.59	86.17
GSMUA_Achr4P30720_001	Banana	nucleus	80.96	82.96
GSMUA_Achr6P05310_001	Banana	nucleus	80.44	82.87
TraesCS6B01G206700.1	Wheat	plastid	78.03	78.69
GSMUA_Achr7P13220_001	Banana	cytosol	76.88	77.7
VIT_11s0016g04620.t01	Wine grape	cytosol	70.71	74.7
KRH63036	Soybean	cytosol	70.61	74.26
KRH03770	Soybean	nucleus	69.87	73.98
KRH54842	Soybean	nucleus	70.19	73.82
KRH56656	Soybean	cytosol	69.98	73.68
Solyc12g006790.1.1	Tomato	nucleus	69.35	71.06
PGSC0003DMT400053301	Potato	nucleus	67.57	70.22
TraesCS4B01G026600.1	Wheat	cytosol	32.53	64.12
TraesCS3B01G027100.1	Wheat	cytosol	10.15	63.4
TraesCS6B01G466700.1	Wheat	nucleus	65.59	61.9
TraesCS2B01G421000.2	Wheat	nucleus	70.5	61.16
TraesCS7B01G482100.1	Wheat	nucleus	65.17	60.37
TraesCS6B01G270900.1	Wheat	nucleus	67.99	59.91
TraesCS5B01G468000.1	Wheat	plastid	53.03	58.08
TraesCS3B01G135800.1	Wheat	cytosol	47.07	53.51
TraesCS5B01G454200.1	Wheat	cytosol	37.55	53.19
TraesCS3B01G287600.1	Wheat	nucleus	50.1	52.87
TraesCS5B01G116900.5	Wheat	cytosol, mitochondrion, nucleus, plastid	46.13	51.94
TraesCS5B01G452500.1	Wheat	nucleus	48.12	50.44
TraesCS2B01G195200.2	Wheat	nucleus	51.67	49.01
TraesCS5B01G451400.2	Wheat	plastid	53.66	48.4
TraesCS5B01G455700.1	Wheat	cytosol, mitochondrion, plastid	49.79	48.32
TraesCS4B01G024000.1	Wheat	nucleus	50.52	47.17
TraesCS5B01G458100.1	Wheat	cytosol	38.7	38.95
TraesCS7B01G437900.1	Wheat	cytosol	30.13	35.69
TraesCS1B01G480100.1	Wheat	nucleus	33.68	34.74
TraesCS7B01G437700.1	Wheat	nucleus	31.8	34.58
TraesCS7B01G450300.1	Wheat	nucleus	32.95	34.28
TraesCS3B01G217300.2	Wheat	golgi, nucleus, unclear	33.79	34.22
TraesCS5B01G162300.1	Wheat	mitochondrion	32.11	34.19
TraesCS7B01G450200.2	Wheat	nucleus	31.38	32.4
TraesCS7B01G373400.1	Wheat	nucleus	26.36	32.06
TraesCS2B01G434000.1	Wheat	nucleus	34.52	31.43
TraesCS2B01G439000.2	Wheat	nucleus, unclear	32.11	29.35
TraesCS2B01G438600.1	Wheat	cytosol, nucleus, plastid	24.37	29.02
TraesCS2B01G438200.1	Wheat	nucleus	26.88	24.04

Protein Annotations

MapMan:16.10.3	Gene3D:2.170.260.10	Gene3D:3.30.420.10	Gene3D:3.40.50.2300	InterPro:ArgoL1	InterPro:ArgoL2
InterPro:Argonaute_Mid_dom	InterPro:Argonaute_N	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0007275	GO:GO:0008150
GO:GO:0019827	GO:GO:0048366	InterPro:IPR003100	InterPro:IPR003165	InterPro:IPR036397	InterPro:PAZ_dom
InterPro:PAZ_dom_sf	PFAM:PF02170	PFAM:PF02171	PFAM:PF08699	PFAM:PF16486	PFAM:PF16487
PFAM:PF16488	PFscan:PS50821	PFscan:PS50822	PANTHER:PTHR22891	PANTHER:PTHR22891:SF45	InterPro:Piwi
InterPro:RNaseH-like_sf	InterPro:RNaseH_sf	SMART:SM00949	SMART:SM00950	SMART:SM01163	SUPFAM:SSF101690
SUPFAM:SSF53098	EnsemblPlantsGene:TraesCS7B01G256500	EnsemblPlants:TraesCS7B01G256500.1	TIGR:cd02846	TIGR:cd04657	SEG:seg

Description

No Description!

Coordinates

chr7B:+:475655288..475661508

Molecular Weight (calculated)

107044.0 Da

IEP (calculated)

9.561

GRAVY (calculated)

-0.387

Length

956 amino acids

Sequence
(BLAST)

001: MLEVLEMTPP PPPPPQPRRH QQPRGGGRKQ PLQSSVAQPK AEAPQPPPLE GGKRCAGKRR GGRGRARPAE GPRPAPGPAA APVEAATRAV IGPPVPSKGL
101: SFCRRPGFGT VGARCVVKAN HFLAEIPDKD LTQYDVKITP EVTSRCVNRA IIAELVRLYR ESDLGMRLPA YDGRKSLYTA GALPFDAREF VVRLTDEDSG
201: TGVPPREREY RVAIKFAARA DLHHLRQFIA GRQADAPQEA VQVLDIVLRE LASQRYVAIG RSFYSPDIRR PQRLGDGLQS WCGFYQSLRP TQMGLSLNID
301: MSSTAFIEAL PVIDFVAQIL GKDVMSRPLS DANRIKIKKA LRGVKVEVTH RENVRRKYRI SGVTAQPTHE LIFPIDDQMN MKSVVEYFKE MYGFTIQQSH
401: LPCLMVGNQK KANYLPMEAC KIVEGQRYTK RLNEKQITSL LKVTCQRPRE KEMDILQTVH QNGYDQDPYA KEFGINISEK LTSVEARVLP APWLKYHDAG
501: KEKECLPQVG QWNMVNKKVI NGGKVSHWAC INFSRSVQET TARGFCQELA QMCQISGMEF NSEPVLPIYS ARPDQVAKAL KHVYNVALHK LKGKELELLL
601: AILPDNNGAL YGDIKRICET DLGLISQCCL TKHVFKISKQ YLANVSLKIN VKMGGRNTVL VDALSWRIPL VSDIPTIIFG ADVTHPETGE DSSPSIAAVV
701: ASQDWPEVTK YAGLVCAQAH RQELIQDLYK TWHDPQRGTV TGGMVRELLI SFRKATGQKP QRIIFYRDGV SEGQFYQVLL YELDAIRKAC ASLEPNYQPP
801: VTFVVVQKRH HTRLFANNHK DRSSMDKSGN ILPGTVVDSK ICHPTEFDFY LCSHAGIQGT SRPAHYHVLW DENNFSADEM QTLTNNLCYT YARCTRSVSV
901: VPPAYYAHLA AFRARFYMEP ELSENHTSKS SSGTNGTSVK PLPAVKEKVK RVMFYC

Best Arabidopsis Sequence Match ( AT5G43810.3 )
(BLAST)

001: MPIRQMKDSS ETHLVIKTQP LKHHNPKTVQ NGKIPPPSPS PVTVTTPATV TQSQASSPSP PSKNRSRRRN RGGRKSDQGD VCMRPSSRPR KPPPPSQTTS
101: SAVSVATAGE IVAVNHQMQM GVRKNSNFAP RPGFGTLGTK CIVKANHFLA DLPTKDLNQY DVTITPEVSS KSVNRAIIAE LVRLYKESDL GRRLPAYDGR
201: KSLYTAGELP FTWKEFSVKI VDEDDGIING PKRERSYKVA IKFVARANMH HLGEFLAGKR ADCPQEAVQI LDIVLRELSV KRFCPVGRSF FSPDIKTPQR
301: LGEGLESWCG FYQSIRPTQM GLSLNIDMAS AAFIEPLPVI EFVAQLLGKD VLSKPLSDSD RVKIKKGLRG VKVEVTHRAN VRRKYRVAGL TTQPTRELMF
401: PVDENCTMKS VIEYFQEMYG FTIQHTHLPC LQVGNQKKAS YLPMEACKIV EGQRYTKRLN EKQITALLKV TCQRPRDREN DILRTVQHNA YDQDPYAKEF
501: GMNISEKLAS VEARILPAPW LKYHENGKEK DCLPQVGQWN MMNKKMINGM TVSRWACVNF SRSVQENVAR GFCNELGQMC EVSGMEFNPE PVIPIYSARP
601: DQVEKALKHV YHTSMNKTKG KELELLLAIL PDNNGSLYGD LKRICETELG LISQCCLTKH VFKISKQYLA NVSLKINVKM GGRNTVLVDA ISCRIPLVSD
701: IPTIIFGADV THPENGEESS PSIAAVVASQ DWPEVTKYAG LVCAQAHRQE LIQDLYKTWQ DPVRGTVSGG MIRDLLISFR KATGQKPLRI IFYRDGVSEG
801: QFYQVLLYEL DAIRKACASL EPNYQPPVTF IVVQKRHHTR LFANNHRDKN STDRSGNILP GTVVDTKICH PTEFDFYLCS HAGIQGTSRP AHYHVLWDEN
901: NFTADGIQSL TNNLCYTYAR CTRSVSIVPP AYYAHLAAFR ARFYLEPEIM QDNGSPGKKN TKTTTVGDVG VKPLPALKEN VKRVMFYC

Arabidopsis Description

AGO10Protein argonaute 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9XGW1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.