Factsheet for TraesCS5B01G455700.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

plastid 1
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G454200.1	Wheat	cytosol	61.62	89.93
TraesCS5B01G451400.2	Wheat	plastid	93.1	86.51
Os03t0789466-00	Rice	cytosol, mitochondrion, nucleus	38.27	82.49
TraesCS3B01G287600.1	Wheat	nucleus	75.74	82.34
EER90726	Sorghum	cytosol	69.04	80.09
TraesCS5B01G452500.1	Wheat	nucleus	73.4	79.28
Os03t0800200-01	Rice	plasma membrane	80.71	75.14
Zm00001d013063_P001	Maize	nucleus	73.3	71.49
Zm00001d032611_P002	Maize	vacuole	26.5	70.16
TraesCS3B01G027100.1	Wheat	cytosol	10.05	64.71
Zm00001d009158_P003	Maize	golgi	28.32	63.84
TraesCS5B01G458100.1	Wheat	cytosol	56.65	58.74
TraesCS5B01G468000.1	Wheat	plastid	51.98	58.65
TraesCS4B01G026600.1	Wheat	cytosol	28.83	58.56
TraesCS2B01G195200.2	Wheat	nucleus	58.27	56.94
Zm00001d036886_P001	Maize	plastid	12.69	55.31
CDX71410	Canola	nucleus	52.28	54.1
CDY04517	Canola	plastid	52.08	53.6
KRH30536	Soybean	plastid	48.22	53.37
Bra011993.1-P	Field mustard	plastid	52.18	53.21
VIT_06s0061g01040.t01	Wine grape	mitochondrion, nucleus	55.13	52.62
AT2G27880.1	Thale cress	cytosol, nucleus, plastid	52.18	51.55
KRH25139	Soybean	plastid	49.85	51.09
VIT_08s0007g04360.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	44.06	51.0
TraesCS4B01G024000.1	Wheat	nucleus	52.49	50.49
TraesCS7B01G256500.1	Wheat	cytosol	48.32	49.79
PGSC0003DMT400018363	Potato	cytosol, nucleus, plastid	50.15	48.2
TraesCS6B01G206700.1	Wheat	plastid	46.09	47.89
Solyc06g074730.2.1	Tomato	nucleus	49.14	47.87
TraesCS6B01G466700.1	Wheat	nucleus	48.93	47.58
TraesCS2B01G421000.2	Wheat	nucleus	52.28	46.73
TraesCS3B01G135800.1	Wheat	cytosol	39.8	46.61
TraesCS7B01G482100.1	Wheat	nucleus	48.32	46.12
TraesCS6B01G270900.1	Wheat	nucleus	49.95	45.35
TraesCS5B01G116900.5	Wheat	cytosol, mitochondrion, nucleus, plastid	37.16	43.11
Zm00001d039440_P001	Maize	cytosol	9.04	36.48
TraesCS5B01G162300.1	Wheat	mitochondrion	30.05	32.96
TraesCS7B01G437900.1	Wheat	cytosol	26.8	32.71
TraesCS7B01G437700.1	Wheat	nucleus	28.53	31.97
TraesCS1B01G480100.1	Wheat	nucleus	29.95	31.82
TraesCS3B01G217300.2	Wheat	golgi, nucleus, unclear	30.05	31.36
TraesCS7B01G450300.1	Wheat	nucleus	29.04	31.12
TraesCS7B01G373400.1	Wheat	nucleus	24.06	30.15
TraesCS7B01G450200.2	Wheat	nucleus	27.82	29.59
TraesCS2B01G434000.1	Wheat	nucleus	31.07	29.14
TraesCS2B01G439000.2	Wheat	nucleus, unclear	30.56	28.78
Zm00001d035554_P001	Maize	plastid	14.62	28.63
TraesCS2B01G438600.1	Wheat	cytosol, nucleus, plastid	21.42	26.28
TraesCS2B01G438200.1	Wheat	nucleus	25.48	23.48
Os03t0789500-01	Rice	cytosol	0.51	2.2

Protein Annotations

Gene3D:2.170.260.10	Gene3D:3.30.420.10	Gene3D:3.40.50.2300	MapMan:35.1	InterPro:ArgoL1	InterPro:ArgoL2
InterPro:Argonaute_Mid_dom	InterPro:Argonaute_N	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488	GO:GO:0005515
InterPro:IPR003100	InterPro:IPR003165	InterPro:IPR036397	InterPro:PAZ_dom	InterPro:PAZ_dom_sf	PFAM:PF02170
PFAM:PF02171	PFAM:PF08699	PFAM:PF16486	PFAM:PF16487	PFAM:PF16488	PFscan:PS50821
PFscan:PS50822	PANTHER:PTHR22891	PANTHER:PTHR22891:SF24	InterPro:Piwi	InterPro:RNaseH-like_sf	InterPro:RNaseH_sf
SMART:SM00949	SMART:SM00950	SMART:SM01163	SUPFAM:SSF101690	SUPFAM:SSF53098	EnsemblPlantsGene:TraesCS5B01G455700
EnsemblPlants:TraesCS5B01G455700.1	TIGR:cd02846	TIGR:cd04657	SEG:seg	:	:

Description

No Description!

Coordinates

chr5B:+:629970304..629985937

Molecular Weight (calculated)

109573.0 Da

IEP (calculated)

9.679

GRAVY (calculated)

-0.368

Length

985 amino acids

Sequence
(BLAST)

001: MAYRGGGGRG APAGGGRGAT GRPPPCASSA PRPAATAPVV ADNPNATGPH QGAYQHGVVV RNPAPAPYAA VRAPPPTPVT IRAPSPTPAT IRAPAPTPSS
101: AAPPFQPARV SAPAPAPPTP AAVAKELEQK LFITETALAP PAAAAAQVVQ PEAVKAPEVE HAPVSKKWLA HPARPGAGTV IQKVMIRANH FVVNVADNAL
201: FHYDVSINPE SKSRAVNREV LSELIKLHGK TSLGGKLPAY DGRKSLYTAG SLPFESEEFS VTLGRAEREY KITIRIAGRT DLYQLQQFLK GRQKDMPQET
301: IQVLDVVLRE SPSWNYVTVS RSFFSTTFGH RGDIGEGLEC WRGYYQSLRP TQMGLSLNID ISATSFFKPV TVVQFVLEFL NLRDASWPLT DRDRVKIKKA
401: LRGVRVETNH QEDQIRRYKI TGITPVPMSQ LIFPVDERGA RMSVVQYFMQ RYNYNLQYTS WPCLQFGSDA RPVYLPMEAC KIVEGQRYSK KLNDKQVTNI
501: LRATCQRPQQ REQSIREMVL HNKYAEDKFA QEFGINVCSD LVSVPARVLP PPMLRYHDSG KEKTCVPSVG QWNMINKKMI NGGIIENWAC VSFSRMRPEE
601: VHRFCCDLIQ MCNMTGMSVN PRPLVDNRSA SPNHIENALR DVYGHEKQLQ LLIVILPEVS GSYGKIKKVC ETDLGIVSQC CLPRHAARPN KQYMENVALK
701: INVKVGGRNT VLERAFVRNG IPFVSEVPTI IFGADVTPPP GEDSASSIAA VVTSMDWPEI TKYRGLVSAQ PHRQEIIEDL FSVSKDPQRG NVNGGMIREL
801: LIAFRRKTGR RPERILFYRD GVSEGQFSHV LLHEMDAIRK ACASLEEGYM PPVTFVVVQK RHHTRLFPEV HGRRDMTDKS GNILPGTMVD LMISHPTEFD
901: FYLCSHAGIQ GTSRPTHYHV LYDENHFTAD ALQSLTNNLC YXYARCTRAV SVVEKKHYTR LSREEVSKKP NKRRQLTEIV MQSDH

Best Arabidopsis Sequence Match ( AT1G48410.1 )
(BLAST)

0001: MVRKRRTDAP SEGGEGSGSR EAGPVSGGGR GSQRGGFQQG GGQHQGGRGY TPQPQQGGRG GRGYGQPPQQ QQQYGGPQEY QGRGRGGPPH QGGRGGYGGG
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC

Arabidopsis Description

AGO1ICU9 [Source:UniProtKB/TrEMBL;Acc:A0A178WL72]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.