Factsheet for Os03t0789466-00

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

nucleus 4
cytosol 1
plastid 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G454200.1	Wheat	cytosol	79.87	54.07
TraesCS5D01G454600.1	Wheat	cytosol	84.03	51.82
TraesCS5A01G446000.1	Wheat	cytosol	84.68	45.58
TraesCS5B01G452500.1	Wheat	nucleus	84.03	42.11
TraesCS3B01G287600.1	Wheat	nucleus	82.28	41.5
Os03t0800200-01	Rice	plasma membrane	96.06	41.49
Os02t0616300-00	Rice	vacuole	29.98	41.39
TraesCS5B01G455700.1	Wheat	cytosol, mitochondrion, plastid	82.49	38.27
TraesCS5B01G451400.2	Wheat	plastid	84.68	36.51
TraesCS5D01G454200.1	Wheat	cytosol, nucleus, plastid	83.59	36.28
TraesCS5B01G458100.1	Wheat	cytosol	74.4	35.79
Zm00001d013063_P001	Maize	nucleus	77.68	35.15
EER93271	Sorghum	cytosol	67.83	30.63
Zm00001d009158_P003	Maize	golgi	28.88	30.21
KRH30536	Soybean	plastid	54.05	27.75
VIT_08s0007g04360.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	51.2	27.5
TraesCS5D01G192700.2	Wheat	nucleus	56.02	27.15
VIT_06s0061g01040.t01	Wine grape	mitochondrion, nucleus	61.05	27.03
CDX71410	Canola	nucleus	55.58	26.68
Os03t0682200-00	Rice	nucleus	27.13	26.67
Os07t0188000-01	Rice	nucleus	60.83	26.43
CDY04517	Canola	plastid	55.14	26.33
Bra011993.1-P	Field mustard	plastid	55.36	26.19
Os03t0682600-00	Rice	nucleus	41.79	25.57
AT2G27880.1	Thale cress	cytosol, nucleus, plastid	55.58	25.48
KRH25139	Soybean	plastid	53.17	25.29
Zm00001d032611_P002	Maize	vacuole	19.91	24.46
Os02t0831600-01	Rice	extracellular	53.61	24.23
Os01t0275200-00	Rice	golgi, peroxisome, plastid	24.51	23.98
Os06t0597400-01	Rice	cytosol	50.98	23.8
Os02t0672200-01	Rice	cytosol	55.8	23.57
Os07t0471300-01	Rice	nucleus	38.29	23.55
Os06t0729300-01	Rice	nucleus	53.17	23.41
Os04t0566500-04	Rice	nucleus	56.24	23.34
PGSC0003DMT400018363	Potato	cytosol, nucleus, plastid	51.64	23.02
Solyc06g074730.2.1	Tomato	nucleus	50.55	22.85
Os02t0169400-01	Rice	nucleus	40.7	21.23
Os04t0151800-02	Rice	nucleus	33.26	16.68
Os01t0275600-01	Rice	nucleus	30.63	15.49
Os03t0449200-00	Rice	nucleus	30.42	13.26
Os04t0615700-01	Rice	nucleus, plasma membrane	27.79	12.28
Zm00001d036886_P001	Maize	plastid	5.25	10.62
Os07t0265600-01	Rice	cytosol, nucleus	6.35	9.39
Zm00001d039440_P001	Maize	cytosol	3.06	5.74
Zm00001d035554_P001	Maize	plastid	5.69	5.17
Os04t0615800-01	Rice	nucleus	0.0	0.0
Os03t0789500-01	Rice	cytosol	0.0	0.0

Protein Annotations

Gene3D:2.170.260.10	Gene3D:3.40.50.2300	MapMan:35.1	UniProt:A0A0P0W4J5	InterPro:ArgoL1	InterPro:ArgoL2
InterPro:Argonaute_Mid_dom	ProteinID:BAS86763.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488	GO:GO:0005515
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0031047	InterPro:IPR003100	InterPro:IPR003165
EnsemblPlantsGene:Os03g0789466	EnsemblPlants:Os03t0789466-00	InterPro:PAZ_dom	InterPro:PAZ_dom_sf	PFAM:PF02170	PFAM:PF02171
PFAM:PF08699	PFAM:PF16487	PFAM:PF16488	PFscan:PS50821	PFscan:PS50822	PANTHER:PTHR22891
PANTHER:PTHR22891:SF108	InterPro:Piwi	InterPro:RNaseH-like_sf	SMART:SM00949	SMART:SM01163	SUPFAM:SSF101690
SUPFAM:SSF53098	UniParc:UPI000393B341	SEG:seg	:	:	:

Description

Similar to Protein argonaute MEL1. (Os03t0789466-00)

Coordinates

chr3:+:32810544..32819095

Molecular Weight (calculated)

52086.9 Da

IEP (calculated)

9.537

GRAVY (calculated)

-0.372

Length

457 amino acids

Sequence
(BLAST)

001: SPSWNYVTVS RSFFSTQFGH RGDIGEGLEC WRGYYQSLRP TQMGLSLNID ISATSFFKPV TVIQFVEEFL NIRDTSRPLS DRDRVKIKKA LRGVRIETNH
101: QEDQIRRYKI TGITPIPMSQ LIFPVDDNGT RKTVVQYFWD RYNYRLKYAS WPCLQSGSDS RPVYLPMEVC KIVEGQRYSK KLNNKQVTNI LRATCQRPQQ
201: REQRIHEMVL HNKYTDDRFA QEFGIKVCND LVSVPARVLP PPMLKYHDSG REKTCAPSVG QWNMINKKMI NGGTVDNWTC LSFSRMRPEE VQRFCGDLIQ
301: MCNATGMSFN PRPVVDVRSS NPNNIENALR DVHSRTSELL AREGKGGLQL LIVILLEVSG SYGKIKRVCE NDLGIVSQCC LPRHASRPNK QYLENVALKI
401: NVKVGGRNTV LERAFIRNGI PFVSEVPTII FGADVTHSTW RGLCIIYCCG CGINGLA

Best Arabidopsis Sequence Match ( AT1G48410.1 )
(BLAST)

0001: MVRKRRTDAP SEGGEGSGSR EAGPVSGGGR GSQRGGFQQG GGQHQGGRGY TPQPQQGGRG GRGYGQPPQQ QQQYGGPQEY QGRGRGGPPH QGGRGGYGGG
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC

Arabidopsis Description

AGO1ICU9 [Source:UniProtKB/TrEMBL;Acc:A0A178WL72]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.