Factsheet for TraesCS5A01G446000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER90726	Sorghum	cytosol	89.05	89.05
TraesCS3B01G287600.1	Wheat	nucleus	93.05	87.2
Os03t0789466-00	Rice	cytosol, mitochondrion, nucleus	45.58	84.68
TraesCS5D01G454200.1	Wheat	cytosol, nucleus, plastid	98.47	79.39
Os03t0800200-01	Rice	plasma membrane	91.17	73.16
Zm00001d032611_P002	Maize	vacuole	31.68	72.31
Zm00001d013063_P001	Maize	nucleus	81.39	68.42
Zm00001d009158_P003	Maize	golgi	33.92	65.9
TraesCS4A01G288300.1	Wheat	plastid	62.66	62.08
TraesCS4A01G288000.1	Wheat	cytosol	52.06	61.65
CDX71410	Canola	nucleus	62.31	55.57
CDY04517	Canola	plastid	62.19	55.17
TraesCS2A01G168900.1	Wheat	cytosol	67.37	55.16
Bra011993.1-P	Field mustard	plastid	62.31	54.76
Zm00001d036886_P001	Maize	plastid	14.49	54.42
VIT_08s0007g04360.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	54.06	53.94
VIT_06s0061g01040.t01	Wine grape	mitochondrion, nucleus	64.55	53.1
KRH25139	Soybean	plastid	59.72	52.76
AT2G27880.1	Thale cress	cytosol, nucleus, plastid	61.72	52.56
KRH30536	Soybean	plastid	54.06	51.57
TraesCS2A01G258200.1	Wheat	cytosol	40.4	51.5
TraesCS7A01G371200.2	Wheat	cytosol	58.07	51.25
TraesCS6A01G178100.2	Wheat	plastid	54.89	49.16
PGSC0003DMT400018363	Potato	cytosol, nucleus, plastid	58.77	48.68
Solyc06g074730.2.1	Tomato	nucleus	57.83	48.57
TraesCS7A01G557400.1	Wheat	plastid	58.42	48.06
TraesCS6A01G254600.2	Wheat	plastid	60.07	47.0
TraesCS2A01G403100.4	Wheat	nucleus	61.37	46.52
TraesCS7A01G067500.2	Wheat	cytosol	46.29	46.02
TraesCS2A01G258100.1	Wheat	mitochondrion	46.29	44.86
TraesCS7A01G040700.5	Wheat	endoplasmic reticulum, golgi, vacuole	61.13	42.89
Zm00001d039440_P001	Maize	cytosol	11.43	39.75
TraesCS3A01G116800.1	Wheat	nucleus	49.23	39.55
TraesCS7A01G521000.1	Wheat	nucleus	33.92	35.51
TraesCS5A01G165900.1	Wheat	cytosol	36.04	34.65
TraesCS3A01G188400.1	Wheat	nucleus	35.92	33.3
TraesCS2A01G414800.1	Wheat	nucleus	36.51	33.19
TraesCS1A01G445500.1	Wheat	golgi, unclear	35.22	32.32
TraesCS7A01G533100.1	Wheat	cytosol	34.28	32.3
TraesCS2A01G419800.2	Wheat	nucleus	25.09	30.21
Zm00001d035554_P001	Maize	plastid	16.96	28.63
TraesCS2A01G419900.1	Wheat	nucleus	33.69	27.26
TraesCS2A01G419500.1	Wheat	nucleus	29.21	23.29
Os03t0789500-01	Rice	cytosol	0.94	3.52

Protein Annotations

Gene3D:2.170.260.10	Gene3D:3.30.420.10	Gene3D:3.40.50.2300	MapMan:35.1	InterPro:ArgoL1	InterPro:ArgoL2
InterPro:Argonaute_Mid_dom	InterPro:Argonaute_N	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488	GO:GO:0005515
InterPro:IPR003100	InterPro:IPR003165	InterPro:IPR036397	InterPro:PAZ_dom	InterPro:PAZ_dom_sf	PFAM:PF02170
PFAM:PF02171	PFAM:PF08699	PFAM:PF16486	PFAM:PF16487	PFAM:PF16488	PFscan:PS50821
PFscan:PS50822	PANTHER:PTHR22891	PANTHER:PTHR22891:SF24	InterPro:Piwi	InterPro:RNaseH-like_sf	InterPro:RNaseH_sf
SMART:SM00949	SMART:SM00950	SMART:SM01163	SUPFAM:SSF101690	SUPFAM:SSF53098	EnsemblPlantsGene:TraesCS5A01G446000
EnsemblPlants:TraesCS5A01G446000.1	TIGR:cd02846	TIGR:cd04657	SEG:seg	:	:

Description

No Description!

Coordinates

chr5A:+:626059392..626067374

Molecular Weight (calculated)

96324.8 Da

IEP (calculated)

9.107

GRAVY (calculated)

-0.395

Length

849 amino acids

Sequence
(BLAST)

001: MIRANHFLVN VADNNLFHYD VSINPESKSR AVNREVLSEL IKLHGKTSLG GKLPAYDGRK SLYTAGSLPF ESEEFSVTLV DPEKKDKEKA EREYKITIRI
101: AGRTDLYHLQ QFLKGRQRDM PQETIQVLDV VLRESPSWNY VTVSRSFFST TFGHRGDIGE GLECWRGYYQ SLRPTQMGLS LNIDISATSF FKPVTVVQFV
201: LEFLNLRDAS RPLTDRDRVK IKKALRGVRV ETNHQEDQIR RYKITGITPV PMSQLIFPVD ERGTRMSVVQ YFMQRYKYNL QYTSWPCLQS GSDARPVYLP
301: MEACKIVEGQ RYSKKLNDKQ VTNILRATCQ RPQQREQSIR EMVLHNKYAE DKFAQEFGIN VCSDLVSVPA RVLPPPMLRY HDSGKEKTCA PSVGQWNMIN
401: KKMINGGIID NWACVSFSRM RPEEVYRFCS DLIQMCNMTG MSVNPRPLVD NRSASPNHIE NALRDVYRRT TEMLGKQGSK KQLQLLIVIL PEVSGSYGKI
501: KKVCETDLGI VSQCCLPRHA ARPNKQYLEN VALKINVKVG GRNTVLERAF VRNGIPFVSE VPTIIFGADV THPPPGEDSA SSIAAVVASM DWPEITKYRG
601: LVSAQPHRQE IIEDLFSVTK DPQRGNVNGG MIRELLIAFR RKTGRRPERI LFYRDGVSEG QFSHVLLHEM DAIRKACASL EEGYMPPVTF VVVQKRHHTR
701: LFPEVHGRRD MTDKSGNILP GTVVDLMICH PTEFDFYLCS HAGIQGTSRP THYHVLYDEN HFTADALQSL TNNLCYTYAR CTRAVSVVPP AYYAHLAAFR
801: ARYYVEGDSS DGGSTPGSSG QAAIAREGPV EVCQLPKIKD NVKDVMFYC

Best Arabidopsis Sequence Match ( AT2G27880.1 )
(BLAST)

001: MSNRGGGGHG GASRGRGGGR RSDQRQDQSS GQVAWPGLQQ SYGGRGGSVS AGRGRGNVGR GENTGDLTAT QVPVASAVSG GRGRGNIGDP TFSVASSSKT
101: VSVASSSKEE SKNTEVSETM SNLQITSTET KPEMTSLPPA SSKAVTFPVR PGRGTLGKKV MVRANHFLVQ VADRDLYHYD VSINPEVISK TVNRNVMKLL
201: VKNYKDSHLG GKSPAYDGRK SLYTAGPLPF DSKEFVVNLA EKRADGSSGK DRPFKVAVKN VTSTDLYQLQ QFLDRKQREA PYDTIQVLDV VLRDKPSNDY
301: VSVGRSFFHT SLGKDARDGR GELGDGIEYW RGYFQSLRLT QMGLSLNIDV SARSFYEPIV VTDFISKFLN IRDLNRPLRD SDRLKVKKVL RTLKVKLLHW
401: NGTKSAKISG ISSLPIRELR FTLEDKSEKT VVQYFAEKYN YRVKYQALPA IQTGSDTRPV YLPMELCQID EGQRYTKRLN EKQVTALLKA TCQRPPDREN
501: SIKNLVVKNN YNDDLSKEFG MSVTTQLASI EARVLPPPML KYHDSGKEKM VNPRLGQWNM IDKKMVNGAK VTSWTCVSFS TRIDRGLPQE FCKQLIGMCV
601: SKGMEFKPQP AIPFISCPPE HIEEALLDIH KRAPGLQLLI VILPDVTGSY GKIKRICETE LGIVSQCCQP RQVNKLNKQY MENVALKINV KTGGRNTVLN
701: DAIRRNIPLI TDRPTIIMGA DVTHPQPGED SSPSIAAVVA SMDWPEINKY RGLVSAQAHR EEIIQDLYKL VQDPQRGLVH SGLIREHFIA FRRATGQIPQ
801: RIIFYRDGVS EGQFSQVLLH EMTAIRKACN SLQENYVPRV TFVIVQKRHH TRLFPEQHGN RDMTDKSGNI QPGTVVDTKI CHPNEFDFYL NSHAGIQGTS
901: RPAHYHVLLD ENGFTADQLQ MLTNNLCYTY ARCTKSVSIV PPAYYAHLAA FRARYYMESE MSDGGSSRSR SSTTGVGQVI SQLPAIKDNV KEVMFYC

Arabidopsis Description

AGO5Protein argonaute 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJK3]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.