Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G118600.1 | Wheat | cytosol, mitochondrion, nucleus | 76.44 | 96.19 |
| TraesCS3B01G135800.1 | Wheat | cytosol | 75.97 | 95.48 |
| HORVU3Hr1G021290.1 | Barley | cytosol, nucleus | 84.67 | 85.16 |
| EER97198 | Sorghum | nucleus | 61.78 | 62.55 |
| Zm00001d006351_P001 | Maize | nucleus | 61.49 | 61.73 |
| Zm00001d021345_P001 | Maize | nucleus | 53.93 | 61.36 |
| Os07t0471300-01 | Rice | nucleus | 40.59 | 57.74 |
| EER91156 | Sorghum | nucleus | 47.59 | 53.8 |
| Zm00001d033206_P001 | Maize | cytosol | 45.32 | 49.59 |
| TraesCS5A01G446000.1 | Wheat | cytosol | 39.55 | 49.23 |
| TraesCS7A01G371200.2 | Wheat | cytosol | 43.99 | 48.34 |
| TraesCS7A01G557400.1 | Wheat | plastid | 46.07 | 47.19 |
| TraesCS4A01G288300.1 | Wheat | plastid | 37.94 | 46.79 |
| TraesCS2A01G258200.1 | Wheat | cytosol | 29.04 | 46.1 |
| TraesCS2A01G403100.4 | Wheat | nucleus | 48.82 | 46.07 |
| TraesCS4A01G288000.1 | Wheat | cytosol | 30.84 | 45.47 |
| TraesCS6A01G178100.2 | Wheat | plastid | 40.78 | 45.46 |
| TraesCS6A01G254600.2 | Wheat | plastid | 46.64 | 45.44 |
| TraesCS2A01G168900.1 | Wheat | cytosol | 41.91 | 42.72 |
| TraesCS7A01G040700.5 | Wheat | endoplasmic reticulum, golgi, vacuole | 48.25 | 42.15 |
| TraesCS2A01G258100.1 | Wheat | mitochondrion | 34.15 | 41.21 |
| TraesCS7A01G067500.2 | Wheat | cytosol | 29.71 | 36.77 |
| TraesCS7A01G521000.1 | Wheat | nucleus | 26.87 | 35.02 |
| TraesCS3A01G188400.1 | Wheat | nucleus | 28.76 | 33.19 |
| TraesCS7A01G533100.1 | Wheat | cytosol | 28.1 | 32.96 |
| TraesCS5A01G165900.1 | Wheat | cytosol | 27.44 | 32.84 |
| TraesCS1A01G445500.1 | Wheat | golgi, unclear | 28.48 | 32.54 |
| TraesCS2A01G414800.1 | Wheat | nucleus | 27.72 | 31.37 |
| TraesCS2A01G419900.1 | Wheat | nucleus | 29.23 | 29.46 |
| TraesCS2A01G419800.2 | Wheat | nucleus | 18.64 | 27.94 |
| TraesCS2A01G419500.1 | Wheat | nucleus | 25.45 | 25.26 |
| OQU89939 | Sorghum | endoplasmic reticulum, plasma membrane | 22.52 | 23.63 |
Protein Annotations
| Gene3D:2.170.260.10 | Gene3D:3.30.420.10 | Gene3D:3.40.50.2300 | MapMan:35.1 | InterPro:ArgoL1 | InterPro:ArgoL2 |
| InterPro:Argonaute_Mid_dom | InterPro:Argonaute_N | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR003100 | InterPro:IPR003165 | InterPro:IPR036397 | InterPro:PAZ_dom | InterPro:PAZ_dom_sf | PFAM:PF02170 |
| PFAM:PF02171 | PFAM:PF08699 | PFAM:PF16486 | PFAM:PF16487 | PFAM:PF16488 | PFscan:PS50821 |
| PFscan:PS50822 | PANTHER:PTHR22891 | PANTHER:PTHR22891:SF103 | InterPro:Piwi | InterPro:RNaseH-like_sf | InterPro:RNaseH_sf |
| SMART:SM00949 | SMART:SM00950 | SMART:SM01163 | SUPFAM:SSF101690 | SUPFAM:SSF53098 | EnsemblPlantsGene:TraesCS3A01G116800 |
| EnsemblPlants:TraesCS3A01G116800.1 | TIGR:cd02846 | TIGR:cd04657 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr3A:+:86337358..86342950
Molecular Weight (calculated)
115232.0 Da
IEP (calculated)
9.707
GRAVY (calculated)
-0.555
Length
1057 amino acids
Sequence
(BLAST)
(BLAST)
0001: MASRGGRGGG RANPDAAQAG YGGRGGAGRG RVDGGGRGRG YYQGDGGGDG GGRGRGYYQG DGGGGRGYYQ GGGDGGGRGR GYYQGEGEDR GYYQGGGDGG
0101: GGRGRGYQGG GDGGGRGRGR GYQGGGGDGG GRGRGYEGAG DGGRGRGRGY QQGGNDYGGG LGGSNYGGGR GGNNYGGRGG RGRGQNQPDP LALQVAGPPL
0201: SERYHTEAAQ LREKFQAMAI SRAEPMFPGR PGFGSKGQVC VVRANHFFVG LVDKGLHQYD VAMSPEPTMT GVFRAVMSTL VKEHQDTTLG GRLPAYDGRK
0301: SLYTAGELPF TTKEFEVTLP DKNPGPPGQR RERKFKVTIK HATLVSLQQL QMLMSGIPTD IPAQALQVLD IVLRDIVLNE RDDMGFVPVG RSFFSRTVED
0401: PIQLGQGIEG WNGFYQSIRP TQSGLSLNID MSSTAFVGGG SLIDFIKEIL NRRDLSRGIQ NELDYVKIKK ALRGLRVEVT HRGQMRRKYR IAGLTKDSAR
0501: ELRFQLSTGE SKTVRDYFRE TYKLQLRYDF LRCLQVGTEQ KPNYLPIEVC NIVPGQRYQK KLDDSQVSKM MAIACQSPAG RETSIRKSVL ENKYNSAKRA
0601: NEFGIEVDSN PTSVRARVLP APKLRYHGTE SCFPENGAWN MRGKKVINGA KVGIWACVNF CNELPEDEVR IFCHKLSEMS STTGVNFNGA KLKIFHARSD
0701: QVEAKLREVR QQAGNMKIDL LLAILPNKNG SLYGDIKRIC ETDIGLMSQC CLLKNVEKSS PQFLANVALK INAKCGGRNS VFADLPVSLP VVWKKPTIIF
0801: GADVTHPSAL DDTAPSIASV VASQDWPEVT KYHGDVHAQG HRVELIEGLE GIVKKLLLSF EKQSKQRPLQ LIFYRDGVSE GQFRKVLEDE IPLIEKAWKA
0901: LYNEKPPITF IVVQKRHHTR LFPSDGKYQD NSGNVMPGTV VDRQICHPTE FDFFLCSHAG IKGTSRPAHY HVLRDDNNFS ADDLQSLTNN LCYTYASCTR
1001: SVSTAPPAYY AHKLAFRARF YLGQVPDMAS EISAGSAPPP LMLPEIKDGL KSHMFYC
0101: GGRGRGYQGG GDGGGRGRGR GYQGGGGDGG GRGRGYEGAG DGGRGRGRGY QQGGNDYGGG LGGSNYGGGR GGNNYGGRGG RGRGQNQPDP LALQVAGPPL
0201: SERYHTEAAQ LREKFQAMAI SRAEPMFPGR PGFGSKGQVC VVRANHFFVG LVDKGLHQYD VAMSPEPTMT GVFRAVMSTL VKEHQDTTLG GRLPAYDGRK
0301: SLYTAGELPF TTKEFEVTLP DKNPGPPGQR RERKFKVTIK HATLVSLQQL QMLMSGIPTD IPAQALQVLD IVLRDIVLNE RDDMGFVPVG RSFFSRTVED
0401: PIQLGQGIEG WNGFYQSIRP TQSGLSLNID MSSTAFVGGG SLIDFIKEIL NRRDLSRGIQ NELDYVKIKK ALRGLRVEVT HRGQMRRKYR IAGLTKDSAR
0501: ELRFQLSTGE SKTVRDYFRE TYKLQLRYDF LRCLQVGTEQ KPNYLPIEVC NIVPGQRYQK KLDDSQVSKM MAIACQSPAG RETSIRKSVL ENKYNSAKRA
0601: NEFGIEVDSN PTSVRARVLP APKLRYHGTE SCFPENGAWN MRGKKVINGA KVGIWACVNF CNELPEDEVR IFCHKLSEMS STTGVNFNGA KLKIFHARSD
0701: QVEAKLREVR QQAGNMKIDL LLAILPNKNG SLYGDIKRIC ETDIGLMSQC CLLKNVEKSS PQFLANVALK INAKCGGRNS VFADLPVSLP VVWKKPTIIF
0801: GADVTHPSAL DDTAPSIASV VASQDWPEVT KYHGDVHAQG HRVELIEGLE GIVKKLLLSF EKQSKQRPLQ LIFYRDGVSE GQFRKVLEDE IPLIEKAWKA
0901: LYNEKPPITF IVVQKRHHTR LFPSDGKYQD NSGNVMPGTV VDRQICHPTE FDFFLCSHAG IKGTSRPAHY HVLRDDNNFS ADDLQSLTNN LCYTYASCTR
1001: SVSTAPPAYY AHKLAFRARF YLGQVPDMAS EISAGSAPPP LMLPEIKDGL KSHMFYC
0001: MVRKRRTDAP SEGGEGSGSR EAGPVSGGGR GSQRGGFQQG GGQHQGGRGY TPQPQQGGRG GRGYGQPPQQ QQQYGGPQEY QGRGRGGPPH QGGRGGYGGG
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC
Arabidopsis Description
AGO1ICU9 [Source:UniProtKB/TrEMBL;Acc:A0A178WL72]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.