CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:

nucleus 2
plastid 1
endoplasmic reticulum 4
extracellular 3
vacuole 3
plasma membrane 4
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER91156	Sorghum	nucleus	28.5	30.7
Os07t0471300-01	Rice	nucleus	20.85	28.26
TraesCS3D01G118600.1	Wheat	cytosol, mitochondrion, nucleus	23.54	28.21
TraesCS3B01G135800.1	Wheat	cytosol	23.14	27.71
OQU91198	Sorghum	nucleus	19.96	27.05
EER90726	Sorghum	cytosol	21.75	25.8
OQU91197	Sorghum	plastid	21.05	23.98
OQU88608	Sorghum	plastid	20.06	22.93
OQU82149	Sorghum	nucleus	24.13	22.56
TraesCS3A01G116800.1	Wheat	nucleus	23.63	22.52
HORVU3Hr1G021290.1	Barley	cytosol, nucleus	23.34	22.36
KXG20286	Sorghum	cytosol	21.75	22.32
EER97198	Sorghum	nucleus	22.54	21.74
EES18841	Sorghum	nucleus	23.83	21.64
KXG20965	Sorghum	nucleus	22.24	21.37
KXG23356	Sorghum	nucleus	18.07	20.66
OQU86696	Sorghum	nucleus	18.07	20.22
EES00570	Sorghum	nucleus	17.28	19.38
OQU86027	Sorghum	plastid	20.95	19.11
EES18816	Sorghum	nucleus	16.78	18.59
EER93271	Sorghum	cytosol	18.37	18.28
EER92100	Sorghum	cytosol	14.6	14.23
KXG27113	Sorghum	nucleus	14.5	13.37

Protein Annotations

KEGG:00052+3.2.1.26	KEGG:00500+3.2.1.26	Gene3D:2.170.260.10	Gene3D:3.40.420.10	Gene3D:3.40.50.2300	MapMan:35.1
InterPro:6-hairpin_glycosidase_sf	UniProt:A0A1W0W6B9	InterPro:ArgoL2	InterPro:Argonaute_Mid_dom	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0006412	GO:GO:0006950	GO:GO:0006952	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009405	GO:GO:0009987	GO:GO:0016787	GO:GO:0017148
GO:GO:0019538	GO:GO:0030598	GO:GO:0031047	GO:GO:0033926	GO:GO:0090729	InterPro:Glyco_hydro_100
InterPro:IPR003100	InterPro:IPR016138	EnsemblPlants:OQU89939	ProteinID:OQU89939	ProteinID:OQU89939.1	InterPro:PAZ_dom
InterPro:PAZ_dom_sf	PFAM:PF00161	PFAM:PF02170	PFAM:PF12899	PFAM:PF16487	PFAM:PF16488
PFscan:PS50821	PANTHER:PTHR22891	PANTHER:PTHR22891:SF103	InterPro:Ribosome-inact_prot_sf	InterPro:Ribosome_inactivat_prot	InterPro:Ribosome_inactivat_prot_sub1
SMART:SM00949	EnsemblPlantsGene:SORBI_3002G298201	SUPFAM:SSF101690	SUPFAM:SSF48208	SUPFAM:SSF56371	UniParc:UPI0009DC90AC
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:67415607..67420574

Molecular Weight (calculated)

114024.0 Da

IEP (calculated)

6.334

GRAVY (calculated)

-0.384

Length

1007 amino acids

Sequence
(BLAST)

0001: MDKVAINHAP AISLLQLRML LAGYPTDIPT QAPQVLETVL GDVLFNERDD IERIPIGPND RTLGVEAWNG LYQSIRSTRV SLSLIADVYS SILVQPLLLI
0101: DFVQKILKID VDRNLTEPEY DKLLKALRDV QIEVTHRHNK HHKYRIVGLS VKPTIDLSSE SPSGATKTVT DHFRERYILE LKYKSLPCIN VGSEQKPIYL
0201: PIEVCKIVPR QCYQKNLECS QVSTLKKSAS IQPEPEQSCH QVVDRKHTKC ANEFGIEFDD NLTTVDARVL LPPNLKYHDS GSLKAWYPMN GHWNMKDKKV
0301: INGAKISNWA CVNFCEVLSK KAIEEFCFKL AEMSRIIGAD FANLKLPIFT ARSDEVEHDI CIYGYPIEIQ ALFFMAMRCA LSWLDFGTNN DIYCTFDFMA
0401: IHGGYFIGNV GPAMDFLWFF LGIFVATLSS LATGEQAKAI MDIVEECWQR PIGEMPLKIC YPAMENQIIT GCGPKNTRWS YDNKGSWPDA AREALRRSIV
0501: YLRGQPMGTV AAIDKSQGAE LSDAKLGLGP HGFSPKQLMD IVRKMSVSNK VTICLDKSED GSDDMFLKSF QAAIGAARLW CLKYSLHYDF SHIYGATVFY
0601: FTTPPGGTFY ITLEFEGRSI TLLLAGRDLY IKGWRDESHG SFEIRMEECA AYMLGEVKVM NIEKNYSFLS TSGRVGGTRI GPEALREAFN ILFKYKGERC
0701: PEVRRAIGVF AVNFPEAIRI QKVYKTVVRS FLNSEQQVLD PIPEASDEQT QPDPEDTNTL WIENCGHYSH QAMLDANARD SETNPPGISN RDGANVESAT
0801: EIFREIRVGL RDACPKAKNE LKPQKIEDPD DEINQSRIPK PKPITRKKRR RKGKVPDLEE GDGQSAESVA LFLLEDWLPE DDDIDDDETR KQKGSDLEGG
0901: DGESEDDEIA DDKQASKAKE VEGVNFSVAK FLERRMEEKI QTMRISEWLS KKLQKTENFH QISQFNAEKA TVKKFIPPKP HTSMLQRNTL GLGQRLMHRV
1001: SRCLRFL

Best Arabidopsis Sequence Match ( AT1G48410.3 )
(BLAST)

0001: MVRKRRTDAP SEGGEGSGSR EAGPVSGGGR GSQRGGFQQG GGQHQGGRGY TPQPQQGGRG GRGYGQPPQQ QQQYGGPQEY QGRGRGGPPH QGGRGGYGGG
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRIRYIPVGR SFYSPDIGKK QSLGDGLESW RGFYQSIRPT QMGLSLNIDM SSTAFIEANP VIQFVCDLLN
0401: RDISSRPLSD ADRVKIKKAL RGVKVEVTHR GNMRRKYRIS GLTAVATREL TFPVDERNTQ KSVVEYFHET YGFRIQHTQL PCLQVGNSNR PNYLPMEVCK
0501: IVEGQRYSKR LNERQITALL KVTCQRPIDR EKDILQTVQL NDYAKDNYAQ EFGIKISTSL ASVEARILPP PWLKYHESGR EGTCLPQVGQ WNMMNKKMIN
0601: GGTVNNWICI NFSRQVQDNL ARTFCQELAQ MCYVSGMAFN PEPVLPPVSA RPEQVEKVLK TRYHDATSKL SQGKEIDLLI VILPDNNGSL YGDLKRICET
0701: ELGIVSQCCL TKHVFKMSKQ YMANVALKIN VKVGGRNTVL VDALSRRIPL VSDRPTIIFG ADVTHPHPGE DSSPSIAAVV ASQDWPEITK YAGLVCAQAH
0801: RQELIQDLFK EWKDPQKGVV TGGMIKELLI AFRRSTGHKP LRIIFYRDGV SEGQFYQVLL YELDAIRKAC ASLEAGYQPP VTFVVVQKRH HTRLFAQNHN
0901: DRHSVDRSGN ILPGTVVDSK ICHPTEFDFY LCSHAGIQGT SRPAHYHVLW DENNFTADGL QSLTNNLCYT YARCTRSVSI VPPAYYAHLA AFRARFYMEP
1001: ETSDSGSMAS GSMARGGGMA GRSTRGPNVN AAVRPLPALK ENVKRVMFYC

Arabidopsis Description

AGO1ICU9 [Source:UniProtKB/TrEMBL;Acc:A0A178WL72]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.